Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq2573 91.5 2e-13 seq60 91.5 2e-13 seq611 89.7 6e-13 seq425 89.7 6e-13 seq5690 87.8 2e-12 seq4609 87.8 2e-12 seq1894 86.0 7e-12 seq1353 86.0 7e-12 seq4785 84.2 2e-11 seq4306 84.2 2e-11 seq3380 84.2 2e-11 seq3053 84.2 2e-11 seq616 84.2 2e-11 seq4431 82.4 8e-11 seq4149 82.4 8e-11 seq3929 82.4 8e-11 seq3916 82.4 8e-11 seq3295 82.4 8e-11 >seq2573 Length=40689 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 |||||||| |||| | |||||||||| | |||| | ||||||||||| ||||||||| Sbjct 38569 TTTTCTCCCCGGCCGGGAATCGAACCCGGATCTCGCACGTGACAGGCGCGGATACTCACC 38510 Query 57063 ACTATACTACCGAGGATTGAATA 57085 |||||||||||||||| || ||| Sbjct 38509 ACTATACTACCGAGGACTGTATA 38487 >seq60 Length=17529 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 56998 AAAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| ||||||| |||| | |||||||||| ||||| | ||||||||||| ||| Sbjct 14316 AAAAATGTTTCTCCCCGGCCGGGAATCGAACCCGAGTCTCGCACGTGACAGGCGCGGATA 14375 Query 57057 CTCACCACTATACTACCGAGGA 57078 |||||||||||||||||||||| Sbjct 14376 CTCACCACTATACTACCGAGGA 14397 Score = 82.4 bits (90), Expect = 8e-11 Identities = 72/86 (84%), Gaps = 3/86 (3%) Strand=Plus/Plus Query 56998 AAAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGG-ACAT 57055 |||||| ||||||| |||| | |||||||||| |||||| | |||||||||||| || Sbjct 14496 AAAAATGTTTCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGGCGGAT 14555 Query 57056 ACTCACCACTATACTACCGAGGATTG 57081 ||||| |||||||||||||| || || Sbjct 14556 ACTCA-CACTATACTACCGAAGACTG 14580 >seq611 Length=17302 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || ||| || | || || ||||| || || ||||| Sbjct 5140 CTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCATCTTCCAGCTGTTTTCCGGCGAA 5199 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||||||||| |||||| || | | Sbjct 5200 GATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATTTTGGCCTTCACGTT 5259 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | || ||| ||| || || | ||||||||||| || || |||||||| || Sbjct 5260 CTCAATGGTATCGGAACCTTCAACCTCAAGGGTGATGGTTTTTCCTGTGAGCGTCTTCAC 5319 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 5320 GAAGATCTGCAT 5331 Score = 82.4 bits (90), Expect = 8e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| || | ||||| || | || || |||||||| || ||||| Sbjct 9267 CTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 9326 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 9327 AATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 9386 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| ||| || |||| |||||||| || || || || ||||| || Sbjct 9387 TTCAATAGTGTCGGAACCTTCAACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTCAC 9446 Query 42197 AAA 42199 || Sbjct 9447 GAA 9449 Score = 82.4 bits (90), Expect = 8e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || || || | || || |||||||| || ||||| Sbjct 9672 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAA 9731 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| |||||||| || | || | | ||||||||| ||| || || | | Sbjct 9732 GATGAGGCGCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 9791 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| | || || |||| |||||||| ||||| || || || || || Sbjct 9792 CTCGATGGTGTCCGAAGCCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCAC 9851 Query 42197 AAAGATTTGCATT 42209 |||||||||||| Sbjct 9852 GAAGATTTGCATT 9864 >seq425 Length=130011 Score = 89.7 bits (98), Expect = 6e-13 Identities = 71/84 (85%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||||||| |||| |||| | |||||||||| |||||| | |||||||||||| |||| Sbjct 125702 AAAAATTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGG-GATAC 125760 Query 57058 TCACCACTATACTACCGAGGATTG 57081 ||| |||||||||||||| || || Sbjct 125761 TCAACACTATACTACCGAAGACTG 125784 >seq5690 Length=60357 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 56998 AAAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| ||||||| | || | |||||||||| |||||| | ||||||||||| ||| Sbjct 47724 AAAAATGTTTCTCCCCTGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATA 47783 Query 57057 CTCACCACTATACTACCGAGGATTG 57081 ||||||||||||||||||| || || Sbjct 47784 CTCACCACTATACTACCGAAGACTG 47808 >seq4609 Length=57444 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| ||| ||| |||| | |||||||||| |||||| | ||||||||||| ||| Sbjct 33408 AAAAATGTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATA 33349 Query 57057 CTCACCACTATACTACCGAGGATTG 57081 || ||||||||||||||||||| || Sbjct 33348 CTTACCACTATACTACCGAGGACTG 33324 >seq1894 Length=23384 Score = 86.0 bits (94), Expect = 7e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| ||| ||| |||| | |||||||||| | |||| | ||||||||||| ||| Sbjct 11433 AAAAATATTCCTCCCCGGCCGGGAATCGAACCCGGTTCTCGCACGTGACAGGCGCGGATA 11374 Query 57057 CTCACCACTATACTACCGAGGA 57078 |||||||||||||||||||||| Sbjct 11373 CTCACCACTATACTACCGAGGA 11352 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||||| ||| | |||| | |||| ||||| |||||| | ||||||||||| |||| Sbjct 2678 AAAAATGATCTTCCCGGCCGGGAATC-AACCCGGGTCTCGCACGTGACAGGCGCGGATAC 2620 Query 57058 TCACCACTATACTACCGAGGAT 57079 |||||||||||||||||||||| Sbjct 2619 TCACCACTATACTACCGAGGAT 2598 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||||| ||| | |||| | |||| ||||| |||||| | ||||||||||| |||| Sbjct 8830 AAAAATGATCTTCCCGGCCGGGAATC-AACCCGGGTCTCGCACGTGACAGGCGCGGATAC 8772 Query 57058 TCACCACTATACTACCGAGGAT 57079 |||||||||||||||||||||| Sbjct 8771 TCACCACTATACTACCGAGGAT 8750 >seq1353 Length=8512 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 56998 AAAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGG-ACAT 57055 |||||| ||||||| |||| | |||||||||| |||||| | |||||||||||| || Sbjct 587 AAAAATGTTTCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGGCGGAT 646 Query 57056 ACTCACCACTATACTACCGAGGATTGAA 57083 ||||| |||||||||||||| || |||| Sbjct 647 ACTCA-CACTATACTACCGAAGACTGAA 673 >seq4785 Length=18666 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| |||| ||| ||| | ||| |||||| |||||| | ||||||||||| |||| Sbjct 8651 AAAATTTTTTTCCCCGGGCGGGAATTGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 8710 Query 57058 TCACCACTATACTACCGAGGATTG 57081 ||||||||||||||||||||| || Sbjct 8711 TCACCACTATACTACCGAGGACTG 8734 >seq4306 Length=19388 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| ||| | |||| | |||| ||||| |||||| | ||||||||||| |||| Sbjct 14205 AAAAAAGATCTTCCCGGCCGGGAATCAAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 14146 Query 57058 TCACCACTATACTACCGAGGATTGAA 57083 ||||||||||||||||||||| |||| Sbjct 14145 TCACCACTATACTACCGAGGACTGAA 14120 >seq3380 Length=7414 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||||| | ||| |||| | |||| ||||| |||||| | ||||||||||| |||| Sbjct 4307 AAAAATGTGTTCC-CGGCCGGGAATCAAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 4249 Query 57058 TCACCACTATACTACCGAGGATTGAA 57083 ||||||||||||||||||||| |||| Sbjct 4248 TCACCACTATACTACCGAGGACTGAA 4223 >seq3053 Length=35341 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| || |||| ||| | |||||||||| |||||| | ||||||||||| |||| Sbjct 18331 AAAAAATTCCTCCCTGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 18390 Query 57058 TCACCACTATACTACCGAGGA 57078 |||||||||||||||||| || Sbjct 18391 TCACCACTATACTACCGAAGA 18411 >seq616 Length=1528 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || |||||||| || | || || || | || || |||||||| || ||||| Sbjct 909 TCCTTCTGGATATTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAG 968 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | |||||||||||| | || | | || || ||| ||| || || | || Sbjct 969 ATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTATCCTGGATCTTGGCCTTCACGTTC 1028 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||| |||||| || | |||||||| ||||| || | ||||| ||| Sbjct 1029 TCAATCGTGTCGGAGCCTTCCACTTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACA 1088 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 1089 AAGATCTGCAT 1099 >seq4431 Length=4284 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 56998 AAAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| ||||||| |||| | |||||||||| |||||| | ||||||||||| ||| Sbjct 2302 AAAAATGTTTCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATA 2361 Query 57057 CTCACCACTATACTACCGAGGA 57078 |||| |||||||||||||| || Sbjct 2362 CTCA-CACTATACTACCGAAGA 2382 >seq4149 Length=40337 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||| | |||| | |||||||||| |||||| | ||||||||||| |||||||||||| Sbjct 3190 TCTTCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACT 3131 Query 57066 ATACTACCGAGGA 57078 ||||||||||||| Sbjct 3130 ATACTACCGAGGA 3118 >seq3929 Length=22750 Score = 82.4 bits (90), Expect = 8e-11 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||| ||||||||| |||| | |||||||||| |||||| | ||||||||||| |||| Sbjct 9989 AAAGATTTTCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 10048 Query 57058 TCACCACTATACTACCGAGGATTGA 57082 | | |||||||||||||| || ||| Sbjct 10049 T-AACACTATACTACCGAAGACTGA 10072 >seq3916 Length=102488 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| ||| | |||| | |||| ||||| |||||| | ||||||||||| |||| Sbjct 23364 AAAAAGCATCTTCCCGGCCGGGAATCAAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 23305 Query 57058 TCACCACTATACTACCGAGGATTGA 57082 ||||||||||||||||||||| ||| Sbjct 23304 TCACCACTATACTACCGAGGACTGA 23280 >seq3295 Length=153373 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| | ||| | |||| | |||| ||||| |||||| | ||||||||||| |||| Sbjct 48032 AAAAAATATCTTCCCGGCCGGGAATC-AACCCGGGTCTCGCACGTGACAGGCGCGGATAC 47974 Query 57058 TCACCACTATACTACCGAGGAT 57079 |||||||||||||||||||||| Sbjct 47973 TCACCACTATACTACCGAGGAT 47952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543173186206560