Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq2573 91.5 2e-13
seq60 91.5 2e-13
seq611 89.7 6e-13
seq425 89.7 6e-13
seq5690 87.8 2e-12
seq4609 87.8 2e-12
seq1894 86.0 7e-12
seq1353 86.0 7e-12
seq4785 84.2 2e-11
seq4306 84.2 2e-11
seq3380 84.2 2e-11
seq3053 84.2 2e-11
seq616 84.2 2e-11
seq4431 82.4 8e-11
seq4149 82.4 8e-11
seq3929 82.4 8e-11
seq3916 82.4 8e-11
seq3295 82.4 8e-11
>seq2573
Length=40689
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
|||||||| |||| | |||||||||| | |||| | ||||||||||| |||||||||
Sbjct 38569 TTTTCTCCCCGGCCGGGAATCGAACCCGGATCTCGCACGTGACAGGCGCGGATACTCACC 38510
Query 57063 ACTATACTACCGAGGATTGAATA 57085
|||||||||||||||| || |||
Sbjct 38509 ACTATACTACCGAGGACTGTATA 38487
>seq60
Length=17529
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 56998 AAAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||| ||||||| |||| | |||||||||| ||||| | ||||||||||| |||
Sbjct 14316 AAAAATGTTTCTCCCCGGCCGGGAATCGAACCCGAGTCTCGCACGTGACAGGCGCGGATA 14375
Query 57057 CTCACCACTATACTACCGAGGA 57078
||||||||||||||||||||||
Sbjct 14376 CTCACCACTATACTACCGAGGA 14397
Score = 82.4 bits (90), Expect = 8e-11
Identities = 72/86 (84%), Gaps = 3/86 (3%)
Strand=Plus/Plus
Query 56998 AAAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGG-ACAT 57055
|||||| ||||||| |||| | |||||||||| |||||| | |||||||||||| ||
Sbjct 14496 AAAAATGTTTCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGGCGGAT 14555
Query 57056 ACTCACCACTATACTACCGAGGATTG 57081
||||| |||||||||||||| || ||
Sbjct 14556 ACTCA-CACTATACTACCGAAGACTG 14580
>seq611
Length=17302
Score = 89.7 bits (98), Expect = 6e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | || ||| || | || || ||||| || || |||||
Sbjct 5140 CTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCATCTTCCAGCTGTTTTCCGGCGAA 5199
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| ||||||||||| | || | | ||||||||| |||||| || | |
Sbjct 5200 GATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATTTTGGCCTTCACGTT 5259
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | || ||| ||| || || | ||||||||||| || || |||||||| ||
Sbjct 5260 CTCAATGGTATCGGAACCTTCAACCTCAAGGGTGATGGTTTTTCCTGTGAGCGTCTTCAC 5319
Query 42197 AAAGATTTGCAT 42208
||||| |||||
Sbjct 5320 GAAGATCTGCAT 5331
Score = 82.4 bits (90), Expect = 8e-11
Identities = 128/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||| ||||| || | ||||| || | || || |||||||| || |||||
Sbjct 9267 CTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 9326
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| ||||||||||| | || | | ||||||||| ||| || |||| |
Sbjct 9327 AATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 9386
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | |||||| ||| || |||| |||||||| || || || || ||||| ||
Sbjct 9387 TTCAATAGTGTCGGAACCTTCAACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTCAC 9446
Query 42197 AAA 42199
||
Sbjct 9447 GAA 9449
Score = 82.4 bits (90), Expect = 8e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | || || || | || || |||||||| || |||||
Sbjct 9672 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAA 9731
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| |||||||| || | || | | ||||||||| ||| || || | |
Sbjct 9732 GATGAGGCGCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 9791
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | ||||| | || || |||| |||||||| ||||| || || || || ||
Sbjct 9792 CTCGATGGTGTCCGAAGCCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCAC 9851
Query 42197 AAAGATTTGCATT 42209
||||||||||||
Sbjct 9852 GAAGATTTGCATT 9864
>seq425
Length=130011
Score = 89.7 bits (98), Expect = 6e-13
Identities = 71/84 (85%), Gaps = 1/84 (1%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|||||||| |||| |||| | |||||||||| |||||| | |||||||||||| ||||
Sbjct 125702 AAAAATTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGG-GATAC 125760
Query 57058 TCACCACTATACTACCGAGGATTG 57081
||| |||||||||||||| || ||
Sbjct 125761 TCAACACTATACTACCGAAGACTG 125784
>seq5690
Length=60357
Score = 87.8 bits (96), Expect = 2e-12
Identities = 71/85 (84%), Gaps = 1/85 (1%)
Strand=Plus/Plus
Query 56998 AAAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||| ||||||| | || | |||||||||| |||||| | ||||||||||| |||
Sbjct 47724 AAAAATGTTTCTCCCCTGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATA 47783
Query 57057 CTCACCACTATACTACCGAGGATTG 57081
||||||||||||||||||| || ||
Sbjct 47784 CTCACCACTATACTACCGAAGACTG 47808
>seq4609
Length=57444
Score = 87.8 bits (96), Expect = 2e-12
Identities = 71/85 (84%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||| ||| ||| |||| | |||||||||| |||||| | ||||||||||| |||
Sbjct 33408 AAAAATGTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATA 33349
Query 57057 CTCACCACTATACTACCGAGGATTG 57081
|| ||||||||||||||||||| ||
Sbjct 33348 CTTACCACTATACTACCGAGGACTG 33324
>seq1894
Length=23384
Score = 86.0 bits (94), Expect = 7e-12
Identities = 69/82 (84%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||| ||| ||| |||| | |||||||||| | |||| | ||||||||||| |||
Sbjct 11433 AAAAATATTCCTCCCCGGCCGGGAATCGAACCCGGTTCTCGCACGTGACAGGCGCGGATA 11374
Query 57057 CTCACCACTATACTACCGAGGA 57078
||||||||||||||||||||||
Sbjct 11373 CTCACCACTATACTACCGAGGA 11352
Score = 82.4 bits (90), Expect = 8e-11
Identities = 68/82 (83%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|||||| ||| | |||| | |||| ||||| |||||| | ||||||||||| ||||
Sbjct 2678 AAAAATGATCTTCCCGGCCGGGAATC-AACCCGGGTCTCGCACGTGACAGGCGCGGATAC 2620
Query 57058 TCACCACTATACTACCGAGGAT 57079
||||||||||||||||||||||
Sbjct 2619 TCACCACTATACTACCGAGGAT 2598
Score = 82.4 bits (90), Expect = 8e-11
Identities = 68/82 (83%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|||||| ||| | |||| | |||| ||||| |||||| | ||||||||||| ||||
Sbjct 8830 AAAAATGATCTTCCCGGCCGGGAATC-AACCCGGGTCTCGCACGTGACAGGCGCGGATAC 8772
Query 57058 TCACCACTATACTACCGAGGAT 57079
||||||||||||||||||||||
Sbjct 8771 TCACCACTATACTACCGAGGAT 8750
>seq1353
Length=8512
Score = 86.0 bits (94), Expect = 7e-12
Identities = 74/88 (84%), Gaps = 3/88 (3%)
Strand=Plus/Plus
Query 56998 AAAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGG-ACAT 57055
|||||| ||||||| |||| | |||||||||| |||||| | |||||||||||| ||
Sbjct 587 AAAAATGTTTCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGGCGGAT 646
Query 57056 ACTCACCACTATACTACCGAGGATTGAA 57083
||||| |||||||||||||| || ||||
Sbjct 647 ACTCA-CACTATACTACCGAAGACTGAA 673
>seq4785
Length=18666
Score = 84.2 bits (92), Expect = 2e-11
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|||| |||| ||| ||| | ||| |||||| |||||| | ||||||||||| ||||
Sbjct 8651 AAAATTTTTTTCCCCGGGCGGGAATTGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 8710
Query 57058 TCACCACTATACTACCGAGGATTG 57081
||||||||||||||||||||| ||
Sbjct 8711 TCACCACTATACTACCGAGGACTG 8734
>seq4306
Length=19388
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| ||| | |||| | |||| ||||| |||||| | ||||||||||| ||||
Sbjct 14205 AAAAAAGATCTTCCCGGCCGGGAATCAAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 14146
Query 57058 TCACCACTATACTACCGAGGATTGAA 57083
||||||||||||||||||||| ||||
Sbjct 14145 TCACCACTATACTACCGAGGACTGAA 14120
>seq3380
Length=7414
Score = 84.2 bits (92), Expect = 2e-11
Identities = 71/86 (83%), Gaps = 1/86 (1%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|||||| | ||| |||| | |||| ||||| |||||| | ||||||||||| ||||
Sbjct 4307 AAAAATGTGTTCC-CGGCCGGGAATCAAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 4249
Query 57058 TCACCACTATACTACCGAGGATTGAA 57083
||||||||||||||||||||| ||||
Sbjct 4248 TCACCACTATACTACCGAGGACTGAA 4223
>seq3053
Length=35341
Score = 84.2 bits (92), Expect = 2e-11
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| || |||| ||| | |||||||||| |||||| | ||||||||||| ||||
Sbjct 18331 AAAAAATTCCTCCCTGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 18390
Query 57058 TCACCACTATACTACCGAGGA 57078
|||||||||||||||||| ||
Sbjct 18391 TCACCACTATACTACCGAAGA 18411
>seq616
Length=1528
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || |||||||| || | || || || | || || |||||||| || |||||
Sbjct 909 TCCTTCTGGATATTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAG 968
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | |||||||||||| | || | | || || ||| ||| || || | ||
Sbjct 969 ATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTATCCTGGATCTTGGCCTTCACGTTC 1028
Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||||| |||||| || | |||||||| ||||| || | ||||| |||
Sbjct 1029 TCAATCGTGTCGGAGCCTTCCACTTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACA 1088
Query 42198 AAGATTTGCAT 42208
||||| |||||
Sbjct 1089 AAGATCTGCAT 1099
>seq4431
Length=4284
Score = 82.4 bits (90), Expect = 8e-11
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand=Plus/Plus
Query 56998 AAAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||| ||||||| |||| | |||||||||| |||||| | ||||||||||| |||
Sbjct 2302 AAAAATGTTTCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATA 2361
Query 57057 CTCACCACTATACTACCGAGGA 57078
|||| |||||||||||||| ||
Sbjct 2362 CTCA-CACTATACTACCGAAGA 2382
>seq4149
Length=40337
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||| | |||| | |||||||||| |||||| | ||||||||||| ||||||||||||
Sbjct 3190 TCTTCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACT 3131
Query 57066 ATACTACCGAGGA 57078
|||||||||||||
Sbjct 3130 ATACTACCGAGGA 3118
>seq3929
Length=22750
Score = 82.4 bits (90), Expect = 8e-11
Identities = 70/85 (82%), Gaps = 1/85 (1%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||| ||||||||| |||| | |||||||||| |||||| | ||||||||||| ||||
Sbjct 9989 AAAGATTTTCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 10048
Query 57058 TCACCACTATACTACCGAGGATTGA 57082
| | |||||||||||||| || |||
Sbjct 10049 T-AACACTATACTACCGAAGACTGA 10072
>seq3916
Length=102488
Score = 82.4 bits (90), Expect = 8e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| ||| | |||| | |||| ||||| |||||| | ||||||||||| ||||
Sbjct 23364 AAAAAGCATCTTCCCGGCCGGGAATCAAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 23305
Query 57058 TCACCACTATACTACCGAGGATTGA 57082
||||||||||||||||||||| |||
Sbjct 23304 TCACCACTATACTACCGAGGACTGA 23280
>seq3295
Length=153373
Score = 82.4 bits (90), Expect = 8e-11
Identities = 68/82 (83%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| | ||| | |||| | |||| ||||| |||||| | ||||||||||| ||||
Sbjct 48032 AAAAAATATCTTCCCGGCCGGGAATC-AACCCGGGTCTCGCACGTGACAGGCGCGGATAC 47974
Query 57058 TCACCACTATACTACCGAGGAT 57079
||||||||||||||||||||||
Sbjct 47973 TCACCACTATACTACCGAGGAT 47952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543173186206560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |