Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_011357.1
Length=62147
Score E
Sequences producing significant alignments: (Bits) Value
seq3605 113 2e-20
>seq3605
Length=744
Score = 113 bits (124), Expect = 2e-20
Identities = 159/218 (73%), Gaps = 9/218 (4%)
Strand=Plus/Plus
Query 42907 GACTGCACCATCAAGGAAGTCCAGTTCACCGCCGGTCAGAAACAGGATATTGATGTGACC 42966
|||||||||| || || ||| | ||||| || |||||| || ||||| || |||
Sbjct 530 GACTGCACCACGAAAGAGGTCAGCTACACCGGTGGCCAGAAAAGTGACATTGAGGTCACC 589
Query 42967 ACGCTCTGCTCCACAGAGCAGGAGAACATCAACGGTCTGGGGGCGTCGTCCGAGATTTCC 43026
|| || |||||||| |||||||||| | ||||||||| | ||| || ||| ||| ||
Sbjct 590 ACCCTGTGCTCCACCGAGCAGGAGATGACCAACGGTCTCGCGGCACCGGGCGAAATTACC 649
Query 43027 ATGTCGGGTAATTTTT-ATCTGAATCAGGCC--CAGAACGCCCTGCGTGATGCCTATGAC 43083
|||| ||||| | | | | || || | |||||| ||||||| ||||||| |||
Sbjct 650 CTGTCCGGTAACTGGTCAGCCGACGAAGCCGGGCAGAACACCCTGCGCAATGCCTACGAC 709
Query 43084 A---ATGACACGGTGTATGCGTTTAAGGTGCAGTTTCC 43118
| |||| || | ||||||||||||||||||| ||
Sbjct 710 ACCGATGA-AC--TCCATGCGTTTAAGGTGCAGTTCCC 744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 198731468815192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |