Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq3605 113 2e-20 >seq3605 Length=744 Score = 113 bits (124), Expect = 2e-20 Identities = 159/218 (73%), Gaps = 9/218 (4%) Strand=Plus/Plus Query 42907 GACTGCACCATCAAGGAAGTCCAGTTCACCGCCGGTCAGAAACAGGATATTGATGTGACC 42966 |||||||||| || || ||| | ||||| || |||||| || ||||| || ||| Sbjct 530 GACTGCACCACGAAAGAGGTCAGCTACACCGGTGGCCAGAAAAGTGACATTGAGGTCACC 589 Query 42967 ACGCTCTGCTCCACAGAGCAGGAGAACATCAACGGTCTGGGGGCGTCGTCCGAGATTTCC 43026 || || |||||||| |||||||||| | ||||||||| | ||| || ||| ||| || Sbjct 590 ACCCTGTGCTCCACCGAGCAGGAGATGACCAACGGTCTCGCGGCACCGGGCGAAATTACC 649 Query 43027 ATGTCGGGTAATTTTT-ATCTGAATCAGGCC--CAGAACGCCCTGCGTGATGCCTATGAC 43083 |||| ||||| | | | | || || | |||||| ||||||| ||||||| ||| Sbjct 650 CTGTCCGGTAACTGGTCAGCCGACGAAGCCGGGCAGAACACCCTGCGCAATGCCTACGAC 709 Query 43084 A---ATGACACGGTGTATGCGTTTAAGGTGCAGTTTCC 43118 | |||| || | ||||||||||||||||||| || Sbjct 710 ACCGATGA-AC--TCCATGCGTTTAAGGTGCAGTTCCC 744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198731468815192