Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq4364 132 5e-26 seq611 120 3e-22 seq616 114 1e-20 seq5007 109 5e-19 seq871 105 6e-18 seq311 105 6e-18 seq3368 102 8e-17 seq1821 89.7 5e-13 seq3387 87.8 2e-12 seq3195 87.8 2e-12 seq2300 87.8 2e-12 >seq4364 Length=177085 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| | ||| | || | ||| | || || || || || || ||||||||| Sbjct 156919 TCCACCGCGAAGTCGGAGTACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAATCGGA 156978 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| || || ||||| ||||| ||| ||||||| ||||||||||| ||||| Sbjct 156979 GAGAGTGCGACCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGG 157038 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| || ||||| ||| || ||| | | || | |||||||| || |||||| Sbjct 157039 AATGCCTTCTTTGTCTTGGATCTTGGCCTTCACGTTCTCAATGGTGTCCGAACCCTCGAC 157098 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | ||| ||||| || || || || || || |||||||| Sbjct 157099 TTCCAGGGTGATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 157146 >seq611 Length=17302 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | || | ||| | || ||||| || || || ||||| ||| Sbjct 4620 CCACCACGGAGTCGGAGGACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 4679 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| | |||||||||||||| || || || Sbjct 4680 AGGGTGCGACCATCTTCCAGCTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCTGGGGGA 4739 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| ||| || ||| | | |||| |||||||| | ||||| Sbjct 4740 ATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTGTCCGATCCTTCGACC 4799 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 |||| || | ||| ||||| |||| || || || || ||||||||| || Sbjct 4800 TCGAGTGTGATCGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATGCCT 4850 Score = 105 bits (116), Expect = 6e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || ||||| |||||||| | ||||| ||| || | ||| ||||| Sbjct 5363 GTGGATTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCTTCCAACTGCTTTCCG 5422 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||||||||||||||| || || || || ||||| || ||| || ||| Sbjct 5423 GCGAAGATCAATCGCTGCTGATCTGGGGGAATTCCTTCCTTATCTTGGATCTTGGCCTTC 5482 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||| |||| || || || || | ||| | ||||| ||||| || ||| Sbjct 5483 ACGTTCTCGATGGTATCCGAACCTTCAACCTCAAGGGTGATGGTTTTTCCGGTGAGCGTT 5542 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || ||||||||| || Sbjct 5543 TTGACGAAGATCTGCATGCCT 5563 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| ||| || ||||| ||||| Sbjct 9667 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTTCCG 9726 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||||||||| || || || || ||||||||| ||| || ||| Sbjct 9727 GCGAAGATGAGGCGCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTC 9786 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||||| | |||||| |||| ||| | || ||||| || || ||| Sbjct 9787 ACATTCTCGATGGTGTCCGAAGCCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTT 9846 Query 127097 TTTACAAAAATCTGCATGGC 127116 || || || || ||||| || Sbjct 9847 TTCACGAAGATTTGCATTGC 9866 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| | || | || | || | ||| || || || || || ||||| || Sbjct 4391 TCCACCGCGAAGACGAAGGACGAGGTGGAGCGTTGATTCCTTCTGGATGTTGTAGTCCGA 4450 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || |||||| ||| || ||||| ||||| ||| |||| | ||||| || || || || Sbjct 4451 CAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGGGG 4510 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| ||| || ||| | | |||| ||||||| | ||||| Sbjct 4511 AATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATAGTGTCCGATCCTTCGAC 4570 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||| | ||| | || ||||| || || || || || |||||||||||| Sbjct 4571 TTCCAGGGTAATGGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCATG 4619 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| || ||||| ||| || ||||||||||| Sbjct 5135 GTCGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCATCTTCCAGCTGTTTTCCG 5194 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || || ||||||||| |||||| ||| Sbjct 5195 GCGAAGATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATTTTGGCCTTC 5254 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||| || | || || || || | ||| | ||||| || || || || Sbjct 5255 ACGTTCTCAATGGTATCGGAACCTTCAACCTCAAGGGTGATGGTTTTTCCTGTGAGCGTC 5314 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || ||||||||| || Sbjct 5315 TTCACGAAGATCTGCATGCCT 5335 >seq616 Length=1528 Score = 114 bits (126), Expect = 1e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| ||| || ||||| ||| || ||||| ||||| Sbjct 1131 GTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCCTCGAGCTGCTTTCCG 1190 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||||||||||||| || ||||| || || |||||||| ||| || ||| Sbjct 1191 GCGAAGATCAATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTG 1250 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | | || ||||| | || | ||| || ||||| || || Sbjct 1251 ACATTCTCGATGGTGTCAGAGCCTTCAACTTCAAGAGTAATCGTCTTTCCGGTGAGCGTC 1310 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || ||||||||| || Sbjct 1311 TTGACGAAGATCTGCATGCCT 1331 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || |||||||| ||| | |||||| ||| || ||||| ||||| Sbjct 903 GTCGATTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTTCCG 962 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||||||||||||| || || || || || || || ||| ||| || ||| Sbjct 963 GCGAAGATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTATCCTGGATCTTGGCCTTC 1022 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | | || ||||| | || | || ||||| |||| || Sbjct 1023 ACGTTCTCAATCGTGTCGGAGCCTTCCACTTCCAGAGTGATGGTCTTGCCAGTCAAGGTC 1082 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || ||||| ||||||||| || Sbjct 1083 TTCACAAAGATCTGCATGCCT 1103 >seq5007 Length=89527 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || ||||| ||| | |||||| || || || || ||||| Sbjct 22290 GTCGACTCTTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCGTCCTCGAGTTGCTTTCCG 22349 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| ||||| |||||||| ||| || ||| Sbjct 22350 GCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTC 22409 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||| || | | ||||| |||| || | ||| || || || || ||| Sbjct 22410 ACGTTCTCGATGGTATCGGAGCCTTCGACCTCGAGCGTGATCGTCTTCCCTGTGAGGGTT 22469 Query 127097 TTTACAAAAATCTGCATGGCTTATT 127121 || ||||| |||||||||||| ||| Sbjct 22470 TTCACAAAGATCTGCATGGCTGATT 22494 >seq871 Length=2590 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | ||| | ||| | || || || ||||| || ||||| ||| Sbjct 726 TCCACCACGGAGACGGAGCACGAGATGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGTT 667 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || || || || ||||| ||||| ||| ||||||| ||||||||||| || || Sbjct 666 GAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCAGGGGG 607 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || |||||| ||| ||| ||| | | |||| | |||| | || || || Sbjct 606 AATACCTTCTTTGTCCTGGATCTTCGCCTTTACGTTCTCGATGCTGTCAGAACCTTCCAC 547 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116 ||| | ||| | ||| || ||||| || || || || || |||||||| || Sbjct 546 TTCCAGGGTGATCGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATTGC 496 >seq311 Length=48857 Score = 105 bits (116), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| ||||| ||| ||||||| ||||||||||| ||||| ||||||||||| Sbjct 16760 TCTTCGAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGATCTGGAGGAATGCCCTCCTTA 16701 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||| | | |||| | |||| | | |||||||||| ||| | Sbjct 16700 TCCTGGATCTTGGCCTTCACGTTCTCGATGCTGTCAGAAGCTTCGACTTCGAGGGTAATG 16641 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116 || || ||||| || || || || || |||||||| || Sbjct 16640 GTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATTGC 16603 >seq3368 Length=489 Score = 102 bits (112), Expect = 8e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030 || ||||| ||||||| ||||||||||| || || ||||| ||||| ||| ||| || Sbjct 306 TTACCAGCAAAGATCAAGCGCTGCTGATCTGGGGGAATGCCTTCCTTATCCTGGATCTTG 247 Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090 ||||| | ||||| |||||| | | ||||||||| | ||| | || |||||||| Sbjct 246 GCCTTGACATTTTCGATGGTGTCAGAGCCCTCGACTTCCAGGGTGATGGTCTTGCCGGTG 187 Query 127091 AGAGTTTTTACAAAAATCTGCATGGC 127116 || || || ||||| || ||||| || Sbjct 186 AGGGTCTTCACAAAGATTTGCATTGC 161 >seq1821 Length=3227 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 126885 CTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGC 126944 ||||||| || | || | |||| ||| | || ||||| || || || ||||| || Sbjct 1597 CTCCACCACGCAGACGAAGGACCAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 1656 Query 126945 CCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAG 127004 | | ||||| ||| ||||| || || || ||| ||| | || |||| || || | Sbjct 1657 CAAGAGTGCGGCCATCCTCTAGTTGCTTCCCGGCGAAGACGAGGCGTCGCTGGTCAGGCG 1716 Query 127005 GTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 |||| ||||| || |||||| ||| | | |||| ||||||||| | ||| | Sbjct 1717 AAGTGCCAACCTTGCCCTGGATTTTGGCCTTCACGTTTTCGGCGGTGTCCGAAGCCTCCA 1776 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||||| || ||||| |||| |||||| || ||||||||||| Sbjct 1777 CCTCGACGAGGCTGGTCTTGCCAGTCAAAGTTTTGACGAAAATCTGCAT 1825 >seq3387 Length=880 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030 || || ||| |||| | || |||||||| || || ||||||||||||||| ||| || Sbjct 704 TTACCGGCGAAGATAAGGCGTTGCTGATCAGGTGGAATGCCCTCCTTGTCCTGGATCTTG 645 Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090 ||| | | || | |||||||| | ||| || |||| ||| | ||| || || || Sbjct 644 GCCTTCACATTCTCAATGGTGTCCGATCCCTCCACCTCGAGGGTGATCGTCTTACCCGTG 585 Query 127091 AGAGTTTTTACAAAAATCTGCAT 127113 || ||||| || ||||||||||| Sbjct 584 AGGGTTTTGACGAAAATCTGCAT 562 >seq3195 Length=29224 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030 || || ||| |||||| |||||||| || || || ||||| ||||||||| ||| || Sbjct 25026 TTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTG 25085 Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090 |||| | |||| ||||||| | |||||| |||| ||| | || || || || Sbjct 25086 GCTTTGACATTCTCGATAGTGTCCGAAGCCTCGACCTCGAGGGTAATTGTCTTACCCGTT 25145 Query 127091 AGAGTTTTTACAAAAATCTGCAT 127113 || ||||| || ||||||||||| Sbjct 25146 AGGGTTTTGACGAAAATCTGCAT 25168 >seq2300 Length=323769 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030 || || ||| |||| | || ||||| || ||||| ||||||||||||||| ||| || Sbjct 1520 TTACCGGCGAAGATGAGGCGTTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTA 1461 Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090 ||| | | |||| |||||||| | ||| || |||| ||| | || || || || Sbjct 1460 GCCTTTACATTCTCGATGGTGTCCGAAGCCTCCACCTCGAGGGTAATTGTCTTACCCGTA 1401 Query 127091 AGAGTTTTTACAAAAATCTGCAT 127113 || ||||| || ||||||||||| Sbjct 1400 AGGGTTTTGACGAAAATCTGCAT 1378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475466124104160