Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq4364 132 5e-26
seq611 120 3e-22
seq616 114 1e-20
seq5007 109 5e-19
seq871 105 6e-18
seq311 105 6e-18
seq3368 102 8e-17
seq1821 89.7 5e-13
seq3387 87.8 2e-12
seq3195 87.8 2e-12
seq2300 87.8 2e-12
>seq4364
Length=177085
Score = 132 bits (146), Expect = 5e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
||||||||| | ||| | || | ||| | || || || || || || |||||||||
Sbjct 156919 TCCACCGCGAAGTCGGAGTACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAATCGGA 156978
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| |||||| || || ||||| ||||| ||| ||||||| ||||||||||| |||||
Sbjct 156979 GAGAGTGCGACCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGG 157038
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||| || ||||| ||| || ||| | | || | |||||||| || ||||||
Sbjct 157039 AATGCCTTCTTTGTCTTGGATCTTGGCCTTCACGTTCTCAATGGTGTCCGAACCCTCGAC 157098
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | ||| | ||| ||||| || || || || || || ||||||||
Sbjct 157099 TTCCAGGGTGATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 157146
>seq611
Length=17302
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | ||| | || | ||| | || ||||| || || || ||||| |||
Sbjct 4620 CCACCACGGAGTCGGAGGACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 4679
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || ||||| ||||||||| | |||||||||||||| || || ||
Sbjct 4680 AGGGTGCGACCATCTTCCAGCTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCTGGGGGA 4739
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || |||||||| ||| || ||| | | |||| |||||||| | |||||
Sbjct 4740 ATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTGTCCGATCCTTCGACC 4799
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
|||| || | ||| ||||| |||| || || || || ||||||||| ||
Sbjct 4800 TCGAGTGTGATCGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATGCCT 4850
Score = 105 bits (116), Expect = 6e-18
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || || ||||| |||||||| | ||||| ||| || | ||| |||||
Sbjct 5363 GTGGATTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCTTCCAACTGCTTTCCG 5422
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| ||||||||||||||||||| || || || || ||||| || ||| || |||
Sbjct 5423 GCGAAGATCAATCGCTGCTGATCTGGGGGAATTCCTTCCTTATCTTGGATCTTGGCCTTC 5482
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||| |||| || || || || | ||| | ||||| ||||| || |||
Sbjct 5483 ACGTTCTCGATGGTATCCGAACCTTCAACCTCAAGGGTGATGGTTTTTCCGGTGAGCGTT 5542
Query 127097 TTTACAAAAATCTGCATGGCT 127117
|| || || ||||||||| ||
Sbjct 5543 TTGACGAAGATCTGCATGCCT 5563
Score = 104 bits (114), Expect = 2e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || | ||||| ||| || ||||| |||||
Sbjct 9667 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTTCCG 9726
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | ||||||||||| || || || || ||||||||| ||| || |||
Sbjct 9727 GCGAAGATGAGGCGCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTC 9786
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| |||||||| | |||||| |||| ||| | || ||||| || || |||
Sbjct 9787 ACATTCTCGATGGTGTCCGAAGCCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTT 9846
Query 127097 TTTACAAAAATCTGCATGGC 127116
|| || || || ||||| ||
Sbjct 9847 TTCACGAAGATTTGCATTGC 9866
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
||||||||| | || | || | || | ||| || || || || || ||||| ||
Sbjct 4391 TCCACCGCGAAGACGAAGGACGAGGTGGAGCGTTGATTCCTTCTGGATGTTGTAGTCCGA 4450
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
|| |||||| ||| || ||||| ||||| ||| |||| | ||||| || || || ||
Sbjct 4451 CAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGGGG 4510
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || |||||||| ||| || ||| | | |||| ||||||| | |||||
Sbjct 4511 AATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATAGTGTCCGATCCTTCGAC 4570
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
||| | ||| | || ||||| || || || || || ||||||||||||
Sbjct 4571 TTCCAGGGTAATGGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCATG 4619
Score = 96.9 bits (106), Expect = 3e-15
Identities = 142/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| || ||||| ||| || |||||||||||
Sbjct 5135 GTCGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCATCTTCCAGCTGTTTTCCG 5194
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| || || || || || ||||||||| |||||| |||
Sbjct 5195 GCGAAGATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATTTTGGCCTTC 5254
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | ||| || | || || || || | ||| | ||||| || || || ||
Sbjct 5255 ACGTTCTCAATGGTATCGGAACCTTCAACCTCAAGGGTGATGGTTTTTCCTGTGAGCGTC 5314
Query 127097 TTTACAAAAATCTGCATGGCT 127117
|| || || ||||||||| ||
Sbjct 5315 TTCACGAAGATCTGCATGCCT 5335
>seq616
Length=1528
Score = 114 bits (126), Expect = 1e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || ||||| ||||| ||| || ||||| ||| || ||||| |||||
Sbjct 1131 GTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCCTCGAGCTGCTTTCCG 1190
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||||||||||||||| || ||||| || || |||||||| ||| || |||
Sbjct 1191 GCGAAGATCAATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTG 1250
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| |||||| | | || ||||| | || | ||| || ||||| || ||
Sbjct 1251 ACATTCTCGATGGTGTCAGAGCCTTCAACTTCAAGAGTAATCGTCTTTCCGGTGAGCGTC 1310
Query 127097 TTTACAAAAATCTGCATGGCT 127117
|| || || ||||||||| ||
Sbjct 1311 TTGACGAAGATCTGCATGCCT 1331
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || || || |||||||| ||| | |||||| ||| || ||||| |||||
Sbjct 903 GTCGATTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTTCCG 962
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||||||||||||||| || || || || || || || ||| ||| || |||
Sbjct 963 GCGAAGATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTATCCTGGATCTTGGCCTTC 1022
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | ||||| | | || ||||| | || | || ||||| |||| ||
Sbjct 1023 ACGTTCTCAATCGTGTCGGAGCCTTCCACTTCCAGAGTGATGGTCTTGCCAGTCAAGGTC 1082
Query 127097 TTTACAAAAATCTGCATGGCT 127117
|| ||||| ||||||||| ||
Sbjct 1083 TTCACAAAGATCTGCATGCCT 1103
>seq5007
Length=89527
Score = 109 bits (120), Expect = 5e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| |||||||| || || ||||| ||| | |||||| || || || || |||||
Sbjct 22290 GTCGACTCTTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCGTCCTCGAGTTGCTTTCCG 22349
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| || ||||| ||||| |||||||| ||| || |||
Sbjct 22350 GCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTC 22409
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||| || | | ||||| |||| || | ||| || || || || |||
Sbjct 22410 ACGTTCTCGATGGTATCGGAGCCTTCGACCTCGAGCGTGATCGTCTTCCCTGTGAGGGTT 22469
Query 127097 TTTACAAAAATCTGCATGGCTTATT 127121
|| ||||| |||||||||||| |||
Sbjct 22470 TTCACAAAGATCTGCATGGCTGATT 22494
>seq871
Length=2590
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | || | ||| | ||| | || || || ||||| || ||||| |||
Sbjct 726 TCCACCACGGAGACGGAGCACGAGATGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGTT 667
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || || || || ||||| ||||| ||| ||||||| ||||||||||| || ||
Sbjct 666 GAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCAGGGGG 607
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || || |||||| ||| ||| ||| | | |||| | |||| | || || ||
Sbjct 606 AATACCTTCTTTGTCCTGGATCTTCGCCTTTACGTTCTCGATGCTGTCAGAACCTTCCAC 547
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116
||| | ||| | ||| || ||||| || || || || || |||||||| ||
Sbjct 546 TTCCAGGGTGATCGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATTGC 496
>seq311
Length=48857
Score = 105 bits (116), Expect = 6e-18
Identities = 118/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| ||||| ||| ||||||| ||||||||||| ||||| |||||||||||
Sbjct 16760 TCTTCGAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGATCTGGAGGAATGCCCTCCTTA 16701
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||| | | |||| | |||| | | |||||||||| ||| |
Sbjct 16700 TCCTGGATCTTGGCCTTCACGTTCTCGATGCTGTCAGAAGCTTCGACTTCGAGGGTAATG 16641
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116
|| || ||||| || || || || || |||||||| ||
Sbjct 16640 GTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATTGC 16603
>seq3368
Length=489
Score = 102 bits (112), Expect = 8e-17
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030
|| ||||| ||||||| ||||||||||| || || ||||| ||||| ||| ||| ||
Sbjct 306 TTACCAGCAAAGATCAAGCGCTGCTGATCTGGGGGAATGCCTTCCTTATCCTGGATCTTG 247
Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090
||||| | ||||| |||||| | | ||||||||| | ||| | || ||||||||
Sbjct 246 GCCTTGACATTTTCGATGGTGTCAGAGCCCTCGACTTCCAGGGTGATGGTCTTGCCGGTG 187
Query 127091 AGAGTTTTTACAAAAATCTGCATGGC 127116
|| || || ||||| || ||||| ||
Sbjct 186 AGGGTCTTCACAAAGATTTGCATTGC 161
>seq1821
Length=3227
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 126885 CTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGC 126944
||||||| || | || | |||| ||| | || ||||| || || || ||||| ||
Sbjct 1597 CTCCACCACGCAGACGAAGGACCAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 1656
Query 126945 CCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAG 127004
| | ||||| ||| ||||| || || || ||| ||| | || |||| || || |
Sbjct 1657 CAAGAGTGCGGCCATCCTCTAGTTGCTTCCCGGCGAAGACGAGGCGTCGCTGGTCAGGCG 1716
Query 127005 GTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064
|||| ||||| || |||||| ||| | | |||| ||||||||| | ||| |
Sbjct 1717 AAGTGCCAACCTTGCCCTGGATTTTGGCCTTCACGTTTTCGGCGGTGTCCGAAGCCTCCA 1776
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| |||||| || ||||| |||| |||||| || |||||||||||
Sbjct 1777 CCTCGACGAGGCTGGTCTTGCCAGTCAAAGTTTTGACGAAAATCTGCAT 1825
>seq3387
Length=880
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030
|| || ||| |||| | || |||||||| || || ||||||||||||||| ||| ||
Sbjct 704 TTACCGGCGAAGATAAGGCGTTGCTGATCAGGTGGAATGCCCTCCTTGTCCTGGATCTTG 645
Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090
||| | | || | |||||||| | ||| || |||| ||| | ||| || || ||
Sbjct 644 GCCTTCACATTCTCAATGGTGTCCGATCCCTCCACCTCGAGGGTGATCGTCTTACCCGTG 585
Query 127091 AGAGTTTTTACAAAAATCTGCAT 127113
|| ||||| || |||||||||||
Sbjct 584 AGGGTTTTGACGAAAATCTGCAT 562
>seq3195
Length=29224
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030
|| || ||| |||||| |||||||| || || || ||||| ||||||||| ||| ||
Sbjct 25026 TTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTG 25085
Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090
|||| | |||| ||||||| | |||||| |||| ||| | || || || ||
Sbjct 25086 GCTTTGACATTCTCGATAGTGTCCGAAGCCTCGACCTCGAGGGTAATTGTCTTACCCGTT 25145
Query 127091 AGAGTTTTTACAAAAATCTGCAT 127113
|| ||||| || |||||||||||
Sbjct 25146 AGGGTTTTGACGAAAATCTGCAT 25168
>seq2300
Length=323769
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030
|| || ||| |||| | || ||||| || ||||| ||||||||||||||| ||| ||
Sbjct 1520 TTACCGGCGAAGATGAGGCGTTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTA 1461
Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090
||| | | |||| |||||||| | ||| || |||| ||| | || || || ||
Sbjct 1460 GCCTTTACATTCTCGATGGTGTCCGAAGCCTCCACCTCGAGGGTAATTGTCTTACCCGTA 1401
Query 127091 AGAGTTTTTACAAAAATCTGCAT 127113
|| ||||| || |||||||||||
Sbjct 1400 AGGGTTTTGACGAAAATCTGCAT 1378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475466124104160
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