Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq4388 163 1e-34
seq616 109 2e-18
seq5658 102 3e-16
seq4622 98.7 4e-15
seq611 96.9 1e-14
>seq4388
Length=30719
Score = 163 bits (180), Expect = 1e-34
Identities = 287/414 (69%), Gaps = 3/414 (1%)
Strand=Plus/Plus
Query 451192 AGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGA 451251
|| ||||||| | ||||||| | | ||||| ||||| ||||||||| |||| |||||
Sbjct 6241 AGCAAAGCCCAAGGTTCAAGTCGAACACAAAGGAGAAACAAAAACTTTTACTCCCGAAGA 6300
Query 451252 AATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCC 451311
|||||||| ||||| || | || |||||||| || || || | | || | |
Sbjct 6301 GATTTCATCGATGGTGCTAATCAAGATGAAAGAGACCGCTGAGGCTTTCCTGGGAACGAC 6360
Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371
| || || || |||| || ||||| |||||||| || ||||| || |||||
Sbjct 6361 GTGCAAAGACGCTGTTGTTACCGTACCCGCCTATTTCAACGACAGTCAACGTCAGGCAAC 6420
Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431
|||||||| || || | || ||||| ||||| || ||||| || ||||| || ||
Sbjct 6421 CAAAGATGCCGGTGCCATCTCCGGATTAAACGTTCTCCGCATTATCAACGAACCGACTGC 6480
Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGT 451491
|||||| | || ||||| || ||| || ||| | || || ||| ||| | | |
Sbjct 6481 TGCTGCTATCGCCTATGG-CTTGGACAAA-AAAGGTCACGGA-GAACGCAATGTCCTTAT 6537
Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATT 451551
|| ||| | || || ||||| |||| ||| | || | |||||||| || | ||
Sbjct 6538 TTTCGATCTCGGCGGTGGAACCTTTGATGTCTCTATCCTAACTATTGAAGAAGGAATTTT 6597
Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|||||| || | ||| || ||||||||||| || || |||||| |||||||
Sbjct 6598 TGAAGTCAAATCTACCGCCGGCGATACTCATCTCGGCGGAGAAGATTTTGATAA 6651
>seq616
Length=1528
Score = 109 bits (120), Expect = 2e-18
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || || || || || ||||||||||| |||||| |||
Sbjct 1327 ATGCAGATCTTCGTCAAGACGCTCACCGGAAAGACGATTACTCTTGAAGTTGAAGGCTCT 1268
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || | | ||| || || ||||| ||||||||||||||||| || ||
Sbjct 1267 GACACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAGGAAGGAATTCCTCCAGACCAG 1208
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || || || ||| | || || || || || ||||| | |||||| | || || ||
Sbjct 1207 CAGCGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACTTTGTCCGACTACAAC 1148
Query 391230 ATTGATAAGGATGCAACACTTCA 391252
||| | ||||| |||| || ||
Sbjct 1147 ATTCAGAAGGAGTCAACCCTCCA 1125
Score = 84.2 bits (92), Expect = 9e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || ||||| || || ||||| || || || || |||
Sbjct 365 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACGATTACCCTGGAGGTCGAGGGCTCT 306
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| ||| | | ||| || || || || || ||||||||||| || || ||
Sbjct 305 GATACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGACCAG 246
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || | |||||| | || || || || || ||||| | |||||| | || || ||
Sbjct 245 CAGCGCCTCATTTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTTTGTCCGACTACAAC 186
Query 391230 ATTGATAAGGA 391240
|| | |||||
Sbjct 185 ATCCAGAAGGA 175
>seq5658
Length=101664
Score = 102 bits (112), Expect = 3e-16
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 451311 CAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAA 451370
|||| || | || || |||||||| |||||||||||||| || | || || || || |
Sbjct 71363 CAGTGACCAACGCGGTTATTACTGTGCCCGCTTATTTCAACGACTCTCAGCGCCAGGCCA 71422
Query 451371 CTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAG 451430
| |||||||| ||||| ||| ||||| | |||||||| || |||| || || ||||| |
Sbjct 71423 CCAAAGATGCCGGACAAATTTCTGGTCTTAATGTTCTCCGTGTTATCAACGAGCCTACTG 71482
Query 451431 CAGCTGCTCTAGCATATGG 451449
| || || || || |||||
Sbjct 71483 CTGCCGCCCTTGCCTATGG 71501
>seq4622
Length=19983
Score = 98.7 bits (108), Expect = 4e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279
|| |||||||| || | ||| ||||||||||| | || || ||| | || | || |||
Sbjct 19772 AAGGGTGAAACCAAGTCCTTTACTCCTGAAGAAGTCTCGTCGATGATCCTCATCAAGATG 19831
Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCC 451339
|| ||||| || ||| | |||| || |||| | || || || || ||||| |||
Sbjct 19832 AAGGAAACCGCCGAAGCGTTCCTTGGATCAACAGTGAAGGACGCCGTCATCACTGTCCCC 19891
Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399
||||| ||||| || ||||| || ||||| ||||||||||| ||||| || |
Sbjct 19892 GCTTACTTCAACGACAGCCAACGCCAGGCAACCAAAGATGCAGGTGCCATTGCCGGACTC 19951
Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGC 451431
|| || | || || || || || ||||| ||
Sbjct 19952 AACGTCTTGCGCATCATCAACGAGCCTACCGC 19983
Score = 87.8 bits (96), Expect = 7e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279
|| |||||||| || | || | ||||||||| | || || ||| | || | || |||
Sbjct 14450 AAGGGTGAAACCAAGTCCTTCACACCTGAAGAAGTCTCGTCGATGATCCTGATCAAGATG 14391
Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCC 451339
|| ||||| || ||| || |||| || |||| | || || || || || || |||
Sbjct 14390 AAGGAAACCGCCGAAGCATTCCTTGGATCAACAGTGAAGGACGCCGTCATCACCGTCCCC 14331
Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399
||||| ||||| || ||||| || ||||| ||||||||||| ||||| || |
Sbjct 14330 GCTTACTTCAACGACAGCCAACGCCAGGCAACCAAAGATGCAGGTGCCATTGCCGGACTC 14271
Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437
|| || | || || || || || || || || || ||
Sbjct 14270 AACGTCTTGCGCATCATCAACGAGCCCACCGCGGCCGC 14233
>seq611
Length=17302
Score = 96.9 bits (106), Expect = 1e-14
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| ||||| || || || ||||| || || ||||| |||||| ||
Sbjct 5559 ATGCAGATCTTCGTCAAAACGCTCACCGGAAAAACCATCACCCTTGAGGTTGAAGGTTCG 5500
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| || | || || || |||||||||||||||||||| || |||||
Sbjct 5499 GATACCATCGAGAACGTGAAGGCCAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCAG 5440
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || || || ||| | || || || | |||||||| | || | ||||||| ||
Sbjct 5439 CAGCGATTGATCTTCGCCGGAAAGCAGTTGGAAGATGGCCGCACCCTCTCGGATTACAAC 5380
Query 391230 ATTGATAAGGA 391240
||| | |||||
Sbjct 5379 ATTCAGAAGGA 5369
Score = 93.3 bits (102), Expect = 2e-13
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || || || ||||| || || ||||| |||||| ||
Sbjct 5331 ATGCAGATCTTCGTGAAGACGCTCACAGGAAAAACCATCACCCTTGAGGTTGAAGGTTCC 5272
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| |||||| | || ||||| || || |||||||||||||| || || ||
Sbjct 5271 GATACCATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 5212
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || | || ||| | || ||||| || |||||||| | |||||| | || || ||
Sbjct 5211 CAGCGCCTCATCTTCGCCGGAAAACAGCTGGAAGATGGCCGCACTTTGTCCGACTACAAC 5152
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
|| | ||||| | || || |||
Sbjct 5151 ATCCAGAAGGAGTCGACTCTCCAC 5128
Score = 87.8 bits (96), Expect = 7e-12
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115
|| ||||| ||||| || || || || || || |||||||| || ||| ||||| |
Sbjct 6174 ATCTTCGTCAAAACGCTCACCGGAAAGACGATCACTCTTGAGGTCGAAGGCTCTGACACG 6115
Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175
||||| | || ||||| |||||||||||||||||||| || || || || ||
Sbjct 6114 ATTGAGAACGTGAAGGCCAAAATCCAAGATAAGGAAGGAATTCCCCCAGACCAGCAGCGC 6055
Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATAT 391231
| |||||| | || || || || || ||||| | |||||| | || || || ||
Sbjct 6054 CTGATTTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACTTTGTCCGACTACAACAT 5999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975570718754072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |