Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq5716 111 2e-19
>seq5716
Length=132174
Score = 111 bits (122), Expect = 2e-19
Identities = 455/713 (64%), Gaps = 27/713 (4%)
Strand=Plus/Minus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994
|| ||||| | |||||| || || | | ||||||| || || | |||||| ||||| ||
Sbjct 122653 TAAATGTTGGACGTGTACGGCTCGATGGATTCATTGTTTCCAAGGATTTGAGCGGTTGAT 122594
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054
|| || ||||| || || | | |||||||| || | || | | | ||| ||
Sbjct 122593 GCGGTCGGCATCGGGGCAAGAAGCAGACTGTTGCGTACCCCGTGCTTCGCGATTTTCTCT 122534
Query 106055 TTGAGAACATCCCAGTC----------GTAGTTGAGCTTGGTTTCAC--CTTC------C 106096
|||||| ||||||| |||| | |||||| | |||| |
Sbjct 122533 TTGAGAGATGCCCAGTCACACTGATCTGTAGGGACGACTGGTTTGCCGTCTTCTGTTTGC 122474
Query 106097 CACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAA 106156
||||| ||| | || || | |||||| | ||||| |||||| | || || || | |
Sbjct 122473 CACATTTCATACTGCAGAATTCCTTGGCTCACTGGAGACCCCTCATAGGTTTCGTAAGGA 122414
Query 106157 CCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAG 106216
|| | ||||| | ||| || ||| ||||| | ||||| || || |||||||||
Sbjct 122413 CCATATTTCTCAGCAAGTTCGCATGACGCTTCCAGAGCTGCGTAGTAAATTGTTTCAAAG 122354
Query 106217 ATACGAGCATTCATCTCCTTGGCTTCAT--CTGAATCAAATGCGTAGCGGCACAAAATAA 106274
|| || |||| || || | | ||| || | || ||| | || |
Sbjct 122353 ATTCGCTTGTTCACATCTCGAGCCTGAGGGCTGGTG--AACGGGTGGCGCATTAGCATGA 122296
Query 106275 ATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTC 106334
| |||| || | ||| ||||| || | || || || | || ||| | ||||| ||
Sbjct 122295 AGGCATCAGCCAAACCCTGAACTCCGATTCCTATTGGGCGATGACGCTTGTTAGAGGTTT 122236
Query 106335 GCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAA 106394
|| | | ||||| | || | |||||| | | ||| | ||| || | |
Sbjct 122235 CAGCTTCCGGTATAGGATAGTAGTTGCAGTCAATTATTTTGTTCAAATTGCGTGTGATGA 122176
Query 106395 TCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATA-C 106453
||| || || || ||||| |||||||| || || || | || || || ||| | |
Sbjct 122175 CCTTGGTAATCTCGTGAAGCTTTTCATAGTCGAAGGTCT---TGTCATCCTTCACAAATC 122119
Query 106454 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 106513
| | || | ||| || |||| |||||||||||| ||||| | |||||
Sbjct 122118 TGTTCAAAG-CGACGGAGGCCAGATTGCAAACAGCGACTTCATCTGGGGACGAGTACTGC 122060
Query 106514 AAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTT 106573
| ||||| || |||| || || | ||| ||||| ||||||||||| |||||| ||||
Sbjct 122059 ACTATTTCGGTGCACAGATTTGAGCACTTGATCGTTCCCAAATTCTTCTGGTTAGACTTT 122000
Query 106574 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626
||||| ||||| ||||| |||||||| || || || || || |||| ||
Sbjct 121999 CGATTGCATGCATCTTTGTAAAGCATGTAAGGAGTTCCGGTTTCGATCTGCGA 121947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589937775650160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |