Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5716 111 2e-19 >seq5716 Length=132174 Score = 111 bits (122), Expect = 2e-19 Identities = 455/713 (64%), Gaps = 27/713 (4%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | |||||| || || | | ||||||| || || | |||||| ||||| || Sbjct 122653 TAAATGTTGGACGTGTACGGCTCGATGGATTCATTGTTTCCAAGGATTTGAGCGGTTGAT 122594 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| || || | | |||||||| || | || | | | ||| || Sbjct 122593 GCGGTCGGCATCGGGGCAAGAAGCAGACTGTTGCGTACCCCGTGCTTCGCGATTTTCTCT 122534 Query 106055 TTGAGAACATCCCAGTC----------GTAGTTGAGCTTGGTTTCAC--CTTC------C 106096 |||||| ||||||| |||| | |||||| | |||| | Sbjct 122533 TTGAGAGATGCCCAGTCACACTGATCTGTAGGGACGACTGGTTTGCCGTCTTCTGTTTGC 122474 Query 106097 CACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAA 106156 ||||| ||| | || || | |||||| | ||||| |||||| | || || || | | Sbjct 122473 CACATTTCATACTGCAGAATTCCTTGGCTCACTGGAGACCCCTCATAGGTTTCGTAAGGA 122414 Query 106157 CCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAG 106216 || | ||||| | ||| || ||| ||||| | ||||| || || ||||||||| Sbjct 122413 CCATATTTCTCAGCAAGTTCGCATGACGCTTCCAGAGCTGCGTAGTAAATTGTTTCAAAG 122354 Query 106217 ATACGAGCATTCATCTCCTTGGCTTCAT--CTGAATCAAATGCGTAGCGGCACAAAATAA 106274 || || |||| || || | | ||| || | || ||| | || | Sbjct 122353 ATTCGCTTGTTCACATCTCGAGCCTGAGGGCTGGTG--AACGGGTGGCGCATTAGCATGA 122296 Query 106275 ATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTC 106334 | |||| || | ||| ||||| || | || || || | || ||| | ||||| || Sbjct 122295 AGGCATCAGCCAAACCCTGAACTCCGATTCCTATTGGGCGATGACGCTTGTTAGAGGTTT 122236 Query 106335 GCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAA 106394 || | | ||||| | || | |||||| | | ||| | ||| || | | Sbjct 122235 CAGCTTCCGGTATAGGATAGTAGTTGCAGTCAATTATTTTGTTCAAATTGCGTGTGATGA 122176 Query 106395 TCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATA-C 106453 ||| || || || ||||| |||||||| || || || | || || || ||| | | Sbjct 122175 CCTTGGTAATCTCGTGAAGCTTTTCATAGTCGAAGGTCT---TGTCATCCTTCACAAATC 122119 Query 106454 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 106513 | | || | ||| || |||| |||||||||||| ||||| | ||||| Sbjct 122118 TGTTCAAAG-CGACGGAGGCCAGATTGCAAACAGCGACTTCATCTGGGGACGAGTACTGC 122060 Query 106514 AAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTT 106573 | ||||| || |||| || || | ||| ||||| ||||||||||| |||||| |||| Sbjct 122059 ACTATTTCGGTGCACAGATTTGAGCACTTGATCGTTCCCAAATTCTTCTGGTTAGACTTT 122000 Query 106574 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 ||||| ||||| ||||| |||||||| || || || || || |||| || Sbjct 121999 CGATTGCATGCATCTTTGTAAAGCATGTAAGGAGTTCCGGTTTCGATCTGCGA 121947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589937775650160