Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq611 104 2e-17
seq5007 102 5e-17
seq616 100 2e-16
>seq611
Length=17302
Score = 104 bits (114), Expect = 2e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| |||||||| || | || |||| |||||||| |||||||| ||
Sbjct 9268 TCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAA 9327
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||||||| | || | || |||||||| ||||| ||||| |
Sbjct 9328 ATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTT 9387
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||||| |||| ||| ||||| ||||| ||||| ||||||||
Sbjct 9388 TCAATAGTGTCGGAACCTTCAACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTCACG 9447
Query 34971 AA 34972
||
Sbjct 9448 AA 9449
Score = 98.7 bits (108), Expect = 6e-16
Identities = 142/198 (72%), Gaps = 12/198 (6%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||||||||| || ||||| ||| | || |||| |||| ||| |||||||| ||
Sbjct 5368 TTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCTTCCAACTGCTTTCCGGCGAA 5427
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACG-- 34907
|| | ||| ||||| ||| | || | || ||||| || ||||| || |||
Sbjct 5428 GATCAATCGCTGCTGATCTGGGGGAATTCCTTCCTTATCTTGGATCTTGGCCTTCACGTT 5487
Query 34908 ---GATGCTAT-CGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGT 34963
|||| ||| ||| || | ||||| || | ||| ||||||||||| ||||| ||
Sbjct 5488 CTCGATGGTATCCGA---AC---CTTCAACCTCAAGGGTGATGGTTTTTCCGGTGAGCGT 5541
Query 34964 CTTCACAAAGATCTGCAT 34981
|| || |||||||||||
Sbjct 5542 TTTGACGAAGATCTGCAT 5559
>seq5007
Length=89527
Score = 102 bits (112), Expect = 5e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||||||||| ||||| || || | ||| | || || || || |||||||| ||
Sbjct 22068 TCTTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCGTCCTCGAGTTGCTTTCCGGCGAAG 22127
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||||||| | || | || |||||||| ||||| || |||
Sbjct 22128 ATGAGGCGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTC 22187
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||||||| |||| || || || || || ||||| || ||||||
Sbjct 22188 TCGATGGTATCGGAGCCCTCAACCTCGAGCGTGATCGTCTTCCCTGTGAGGGTTTTCACA 22247
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 22248 AAGATCTGCAT 22258
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||| ||||| ||||| || || | ||| | || || || || |||||||| ||
Sbjct 22296 TCTTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCGTCCTCGAGTTGCTTTCCGGCGAAG 22355
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||||||| | || | || |||||||| ||||| || |||
Sbjct 22356 ATGAGGCGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTC 22415
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | | || || |||| || || || || || ||||| || ||||||
Sbjct 22416 TCGATGGTATCGGAGCCTTCGACCTCGAGCGTGATCGTCTTCCCTGTGAGGGTTTTCACA 22475
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 22476 AAGATCTGCAT 22486
>seq616
Length=1528
Score = 100 bits (110), Expect = 2e-16
Identities = 142/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||||||||| ||||| |||||||||||| | || |||| || ||||| |||||||| ||
Sbjct 402 TTCTTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAA 461
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || ||||||||| | || | || |||||||| ||||| || ||
Sbjct 462 AATGAGGCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTCAC--- 518
Query 34910 TGCTATCGAT--TCACCG-GCC-TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965
| | ||||| | ||| ||| || || || | ||| || || || || ||||| || |
Sbjct 519 -GTTCTCGATGGTGTCCGAGCCTTCCACTTCCAAGGTGATCGTCTTGCCGGTGAGCGTTT 577
Query 34966 TCACAAAGATCTGCAT 34981
| || |||||||||||
Sbjct 578 TGACGAAGATCTGCAT 593
Score = 100 bits (110), Expect = 2e-16
Identities = 139/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| || | | || |||| || ||||| |||||||| ||
Sbjct 1137 TCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAG 1196
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| | ||| ||||||||| | || | || |||||||| ||||| |||||| ||
Sbjct 1197 ATCAATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTGAC--AT 1254
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | ||| | | ||||| || | || || || ||||| ||||| ||||| |
Sbjct 1255 TCTCGATGGTGTCAGAGCCTTCAACTTCAAGAGTAATCGTCTTTCCGGTGAGCGTCTTGA 1314
Query 34969 CAAAGATCTGCAT 34981
| |||||||||||
Sbjct 1315 CGAAGATCTGCAT 1327
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || | | || |||| || ||||| |||||||| ||
Sbjct 174 TTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAA 233
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || ||||||||| | || | || || ||||| ||||| ||||||
Sbjct 234 AATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTGACATT 293
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | ||| | |||| || || | ||| || || || || ||||| ||||||||
Sbjct 294 TTCGATGGTATCAGAGCCCTCGACCTCCAGGGTAATCGTCTTGCCAGTGAGGGTCTTCAC 353
Query 34970 AAAGATCTGCAT 34981
|||||||||||
Sbjct 354 GAAGATCTGCAT 365
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| || || ||||| || ||| | || |||| |||||||| |||||||| ||
Sbjct 908 TTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAA 967
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| | ||| ||||||||| | || | || || || || ||||| || |||
Sbjct 968 GATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTATCCTGGATCTTGGCCTTCACGTT 1027
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| |||| || | | || || || | || ||||| || || || | ||||||||
Sbjct 1028 CTCAATCGTGTCGGAGCCTTCCACTTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCAC 1087
Query 34970 AAAGATCTGCAT 34981
||||||||||||
Sbjct 1088 AAAGATCTGCAT 1099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324610517942352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |