Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_018874.1
Length=211518
Score E
Sequences producing significant alignments: (Bits) Value
seq4058 98.7 1e-15
>seq4058
Length=36080
Score = 98.7 bits (108), Expect = 1e-15
Identities = 145/203 (71%), Gaps = 2/203 (1%)
Strand=Plus/Minus
Query 197083 GGATTGTAACAGGCGAGTAAGAAAGCG-CCGTAGGTTCCCGTTCTCTTTCCCACCCCGTT 197141
|||| ||| || ||||| |||| | | || ||||||||||| | ||||| ||
Sbjct 33932 GGATCGTAGCACGCGAG-AAGATATCCTCCATAGGTTCCCGTACGTTTTCCGGTTCCACA 33874
Query 197142 GAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTT 197201
| |||||||| ||||| ||||| || ||||||| || || || | ||||| || ||
Sbjct 33873 ATATCCTCCGATGACCACGAGATCGAGCGTGTCGCCAACTCCATCTAGATAATCCTTTTT 33814
Query 197202 CAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGT 197261
|| || |||||||| || | ||||| |||||||| || |||| |||||| ||
Sbjct 33813 CAACTTCAGCCAGCTGTGCGAGCGTTTGGCGATCTCGTAAGTCGCGTGGTCGTCCAACGT 33754
Query 197262 CTTGATCATCAATCCCTCGCAAT 197284
||| | ||| | ||| |||||||
Sbjct 33753 CTTAACCATAAGTCCTTCGCAAT 33731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 676680249493920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |