Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq4058 98.7 1e-15 >seq4058 Length=36080 Score = 98.7 bits (108), Expect = 1e-15 Identities = 145/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 197083 GGATTGTAACAGGCGAGTAAGAAAGCG-CCGTAGGTTCCCGTTCTCTTTCCCACCCCGTT 197141 |||| ||| || ||||| |||| | | || ||||||||||| | ||||| || Sbjct 33932 GGATCGTAGCACGCGAG-AAGATATCCTCCATAGGTTCCCGTACGTTTTCCGGTTCCACA 33874 Query 197142 GAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTT 197201 | |||||||| ||||| ||||| || ||||||| || || || | ||||| || || Sbjct 33873 ATATCCTCCGATGACCACGAGATCGAGCGTGTCGCCAACTCCATCTAGATAATCCTTTTT 33814 Query 197202 CAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGT 197261 || || |||||||| || | ||||| |||||||| || |||| |||||| || Sbjct 33813 CAACTTCAGCCAGCTGTGCGAGCGTTTGGCGATCTCGTAAGTCGCGTGGTCGTCCAACGT 33754 Query 197262 CTTGATCATCAATCCCTCGCAAT 197284 ||| | ||| | ||| ||||||| Sbjct 33753 CTTAACCATAAGTCCTTCGCAAT 33731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676680249493920