Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq3195 84.2 2e-11 >seq3195 Length=29224 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||||||||| || ||||| ||||| || || | ||||| ||| |||||||| ||||| Sbjct 25025 CTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 25084 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 ||| ||| | | || || || ||||| ||||| | ||||| || || ||||| Sbjct 25085 GGCTTTGACATTCTCGATAGTGTCCGAAGCCTCGACCTCGAGGGTAATTGTCTTACCCGT 25144 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | ||||| || ||||||||||| Sbjct 25145 TAGGGTTTTGACGAAAATCTGCAT 25168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380910514622382