Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq5071 196 9e-45
>seq5071
Length=368534
Score = 196 bits (216), Expect = 9e-45
Identities = 306/438 (70%), Gaps = 0/438 (0%)
Strand=Plus/Plus
Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189
||| || ||||| | || | |||||| |||||| ||||| ||||| | | |||
Sbjct 135100 GCATGCGAAGTCGCGATGTAGGCCTTCATCCCGGGAAATGAGTTCGTTGCTGTGGGTGAG 135159
Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249
|||||||||| || | || ||| | |||||| || || ||||| || || ||||||||
Sbjct 135160 GCCAGGCATGAGACCACGCTTTTTCAACCAGAATATGGCAGCGAACGATCCTGAGAAGAA 135219
Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309
||||||||||| || ||||| ||| | | | |||||| || |||||||||||
Sbjct 135220 AATGCCCTCCACAGCAGCGAAGGCGATCACACGTGTTCCGAACGACGCGTTCTTGTCACC 135279
Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369
|||||| |||||||||||| || ||||| ||||||||||| | | |||||
Sbjct 135280 GATCCAACGAAGCGCCCAGTCAGCTTTCTTTTTGATGCATGGGAATTCTTGGATGGCGTT 135339
Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429
||||||||| || ||||| | || | || |||| | || ||| | ||||||
Sbjct 135340 GAAGAGCTTGTTCTTCTCACGAGGATCGGTCACGTAGGCCTCAATCATCTTCGAGTACAT 135399
Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489
|||||||| | ||| | ||||| ||||| | |||||| | |||||| ||
Sbjct 135400 TTCAGAGTGAATCCCCTCGACGGCGATTTGGAAGCTGTAGAACGAAAGGGCCTCCGGCAT 135459
Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549
|| || ||| | ||| | || | ||||| |||||||| || |||||||| || ||
Sbjct 135460 CTTGACCTCTTGAGTGAAACGATCGATGAGATTTTCATTGACGATGCCATCTGATGCTGC 135519
Query 48550 AAAGAAGGCAAGGACATG 48567
||||| || | |||||
Sbjct 135520 GAAGAATGCCAATACATG 135537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931464867970560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |