Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5071 196 9e-45 >seq5071 Length=368534 Score = 196 bits (216), Expect = 9e-45 Identities = 306/438 (70%), Gaps = 0/438 (0%) Strand=Plus/Plus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| || ||||| | || | |||||| |||||| ||||| ||||| | | ||| Sbjct 135100 GCATGCGAAGTCGCGATGTAGGCCTTCATCCCGGGAAATGAGTTCGTTGCTGTGGGTGAG 135159 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 |||||||||| || | || ||| | |||||| || || ||||| || || |||||||| Sbjct 135160 GCCAGGCATGAGACCACGCTTTTTCAACCAGAATATGGCAGCGAACGATCCTGAGAAGAA 135219 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||||||||||| || ||||| ||| | | | |||||| || ||||||||||| Sbjct 135220 AATGCCCTCCACAGCAGCGAAGGCGATCACACGTGTTCCGAACGACGCGTTCTTGTCACC 135279 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 |||||| |||||||||||| || ||||| ||||||||||| | | ||||| Sbjct 135280 GATCCAACGAAGCGCCCAGTCAGCTTTCTTTTTGATGCATGGGAATTCTTGGATGGCGTT 135339 Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429 ||||||||| || ||||| | || | || |||| | || ||| | |||||| Sbjct 135340 GAAGAGCTTGTTCTTCTCACGAGGATCGGTCACGTAGGCCTCAATCATCTTCGAGTACAT 135399 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 |||||||| | ||| | ||||| ||||| | |||||| | |||||| || Sbjct 135400 TTCAGAGTGAATCCCCTCGACGGCGATTTGGAAGCTGTAGAACGAAAGGGCCTCCGGCAT 135459 Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549 || || ||| | ||| | || | ||||| |||||||| || |||||||| || || Sbjct 135460 CTTGACCTCTTGAGTGAAACGATCGATGAGATTTTCATTGACGATGCCATCTGATGCTGC 135519 Query 48550 AAAGAAGGCAAGGACATG 48567 ||||| || | ||||| Sbjct 135520 GAAGAATGCCAATACATG 135537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931464867970560