Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_019514.1
Length=74669
Score E
Sequences producing significant alignments: (Bits) Value
seq5140 93.3 2e-14
>seq5140
Length=7192
Score = 93.3 bits (102), Expect = 2e-14
Identities = 174/252 (69%), Gaps = 14/252 (6%)
Strand=Plus/Minus
Query 17072 CTGCCTCGCAGTGGCCTTGGGCATAAATCTGGCATTGTACTTGGGAACCTGGTGGGTCTG 17131
||||| ||| |||||| || |||||| ||||| || | || |||||||| || |||
Sbjct 2924 CTGCCGCGCTCTGGCCTGGGCCATAAACACGGCATCGTGTTGGGCAACCTGGTCGGCCTG 2865
Query 17132 ATTGATTCGGACTATCAGGGTGAGCTGAAGGTTTCCCTGTGGAACCG----CAG--CGC- 17184
|| ||||||||||| ||||| || |||| ||| || |||||||| ||| |||
Sbjct 2864 ATCGATTCGGACTACCAGGGCGAACTGATGGTGTCATGCTGGAACCGTGGCCAGACCGCG 2805
Query 17185 TGAACCATACACTGTCAGCCCTGGTGAGCGTGTTGCCCAAATGGTTATCGTGCCAGTAGT 17244
| | ||| | ||||| || || || ||||||| |||| | ||||| || ||
Sbjct 2804 TTCAACAT-CGCTGTC------GGCGAACGCATTGCCCAGTTGGTACTGGTGCCGGTGGT 2752
Query 17245 GCAGGCACAGTTTGAGCTGGTTGATGAATTCACTGCTTCAGAACGTGGAGACGGCGGATT 17304
|||||| || || || ||||| | || || || | |||| || | ||||| ||
Sbjct 2751 GCAGGCGCACTTCGAACTGGTACAAGAGTTTGATGAAACCCAACGCGGCGCAGGCGGTTT 2692
Query 17305 TGGCCACACCGG 17316
||| || ||||
Sbjct 2691 TGGGCATTCCGG 2680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 238799019734620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |