Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq2264 116 2e-20
seq5658 107 1e-17
seq616 105 4e-17
seq611 105 4e-17
seq4443 96.9 2e-14
seq4386 93.3 3e-13
seq4684 86.0 4e-11
>seq2264
Length=15866
Score = 116 bits (128), Expect = 2e-20
Identities = 160/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 474653 TTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCA 474712
||| | || ||| |||| ||| | |||||| | | || ||||| ||| ||| ||
Sbjct 4748 TTTGCTCCCGAAGAAATCTCTGCCATGGTTCTTGGAAAGATGAAGGAAATCGCCGAATCG 4689
Query 474713 TATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCT 474772
|| || ||||||||||| | | || || | ||||| || || || || || ||| ||
Sbjct 4688 TACCTCGGACAAGAAGTCAAGCACGCCGTCGTCACTGTCCCGGCCTACTTCAACGATGCT 4629
Query 474773 CAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATT 474832
||||||||||| || || ||||| || || || || | ||||| ||||||| ||
Sbjct 4628 CAACGTCAAGCCACCAAGGATGCCGGCGTTATCGCTGGATTGAATGTAGTACGTATCATC 4569
Query 474833 AATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
|| ||||| || || ||||| |||| || || |||||||||||
Sbjct 4568 AACGAACCTACTGCCGCCGCTATTGCCTACGGCCTTGATAAGAA 4525
Score = 96.9 bits (106), Expect = 2e-14
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805
||||| || || || || || ||| ||||||||||||| || || ||||| || ||
Sbjct 5045 ACTGTCCCGGCCTACTTCAACGATGCTCAACGTCAAGCCACCAAGGATGCCGGTGTTATC 4986
Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865
|| ||| | |||||| ||||||| || || ||||| || || ||||| |||| || ||
Sbjct 4985 GCTGGTTTGAATGTTGTACGTATCATCAACGAACCTACTGCCGCCGCTATTGCCTACGGA 4926
Query 474866 CTTGATAAGAA 474876
|||||||||||
Sbjct 4925 CTTGATAAGAA 4915
>seq5658
Length=101664
Score = 107 bits (118), Expect = 1e-17
Identities = 107/139 (77%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
|| || |||||||| || || ||||| || || ||||| || || || || ||||||||
Sbjct 71374 GCGGTTATTACTGTGCCCGCTTATTTCAACGACTCTCAGCGCCAGGCCACCAAAGATGCC 71433
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
||| |||| | |||||||||||| | ||| |||| || || || || || ||||| |||
Sbjct 71434 GGACAAATTTCTGGTCTTAATGTTCTCCGTGTTATCAACGAGCCTACTGCTGCCGCCCTT 71493
Query 474857 GCTTATGGTCTTGATAAGA 474875
|| |||||| | || ||||
Sbjct 71494 GCCTATGGTTTGGACAAGA 71512
>seq616
Length=1528
Score = 105 bits (116), Expect = 4e-17
Identities = 115/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| || || |||||||| || || || | || || || || |||||||||||||||||
Sbjct 1172 ATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGAGGAATTCCTTCCTT 1231
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
|||||| ||||| ||||||| || || || |||| | | | |||||| |||||
Sbjct 1232 GTCTTGGATCTTGGCTTTGACATTCTCGATGGTGTCAGAGCCTTCAACTTCAAGAGTAAT 1291
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || |||||||| ||||| ||||| || ||
Sbjct 1292 CGTCTTTCCGGTGAGCGTCTTGACGAAGATCTG 1324
Score = 91.5 bits (100), Expect = 1e-12
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| || || |||||||| || ||||| || || || || || || ||||||||||| ||
Sbjct 210 ATCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCTTT 269
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
||| || ||||| ||||||| ||| || ||||||| | || ||||||||
Sbjct 270 GTCCTGGATCTTGGCTTTGACATTTTCGATGGTATCAGAGCCCTCGACCTCCAGGGTAAT 329
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || ||||| ||||| ||||| || ||
Sbjct 330 CGTCTTGCCAGTGAGGGTCTTCACGAAGATCTG 362
>seq611
Length=17302
Score = 105 bits (116), Expect = 4e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||||||||| || || ||||| || || || || || || || || | |||||
Sbjct 9237 ACGAAGACGAAGAACGAGATGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGAGT 9296
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | |||||| || |||||||| || ||||| || || || || || || ||||||||
Sbjct 9297 GCGGCCATCTTCCAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCTGGGGGAATTCC 9356
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||||||| || ||||| |||||| ||||||||| || | | | || ||
Sbjct 9357 TTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATAGTGTCGGAACCTTCAACCTCGAG 9416
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAA 480763
||| || || || || ||||| ||||| |||||
Sbjct 9417 GGTGATGGTCTTTCCAGTGAGGGTCTTCACGAA 9449
Score = 87.8 bits (96), Expect = 1e-11
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| || || |||||||| || || || || || ||||| || || ||||||||||||||
Sbjct 4463 ATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGGGGAATTCCTTCCTT 4522
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
|||||| ||||| || || || ||||| || | | ||| ||||||||
Sbjct 4523 GTCTTGGATCTTGGCCTTCACGTTCTCGATAGTGTCCGATCCTTCGACTTCCAGGGTAAT 4582
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || ||||| ||||| |||||||| ||
Sbjct 4583 GGTCTTGCCAGTGAGCGTCTTCACGAAAATCTG 4615
Score = 87.8 bits (96), Expect = 1e-11
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
|| ||||| || || ||||| || || ||| || || || ||||| | || ||
Sbjct 5339 CGGAGACGAAGGACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAATCCGAGAGGGTG 5398
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
| | |||||| | |||||||| || || || | || || ||||| || |||||||||
Sbjct 5399 CGGCCATCTTCCAACTGCTTTCCGGCGAAGATCAATCGCTGCTGATCTGGGGGAATTCCT 5458
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731
||||| ||||| ||||| || || || || ||||| | | | ||||||
Sbjct 5459 TCCTTATCTTGGATCTTGGCCTTCACGTTCTCGATGGTATCCGAACCTTCAACCTCAAGG 5518
Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || ||||| |||||||| || || ||||| || ||
Sbjct 5519 GTGATGGTTTTTCCGGTGAGCGTTTTGACGAAGATCTG 5556
Score = 86.0 bits (94), Expect = 4e-11
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| || ||||||||||| || ||||| || || || ||||| |||||||||||||||||
Sbjct 5612 ATCCTCGAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCTGGAGGAATTCCTTCCTT 5671
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
||| || ||||| ||| || ||||| ||||| | | | |||||||| ||
Sbjct 5672 GTCCTGGATCTTGGCTTTCACGTTCTCAATGGTATCGGAACCTTCAACCTCAAGGGTGAT 5731
Query 480737 AGTTTTACCGGT 480748
||||| || ||
Sbjct 5732 GGTTTTTCCTGT 5743
>seq4443
Length=182794
Score = 96.9 bits (106), Expect = 2e-14
Identities = 120/162 (74%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159
|| ||||| || ||||| ||||||||| | |||||| |||| ||||| ||| | || ||
Sbjct 142580 GACTTTTCGTCGCCAAACATTGCAAAGCAGATGCATGTTGGTCACTTAAGAACAACTATT 142639
Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGT-GGATGTGAAGTACAAAGAATAAA 817218
||||| || | | | | | | |||| | ||||| |||| ||| || | | | ||
Sbjct 142640 ATTGGAGATGTTATCTCTCGCCT-TATGGAGTTTGTTGGATTTGATGTTCTTCGTCTCAA 142698
Query 817219 TCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260
|||| | |||||||||||||| || ||||| ||| |||||||
Sbjct 142699 TCATTTGGGTGATTGGGGAACCCAGTTTGGAATGCTAATTGC 142740
>seq4386
Length=106676
Score = 93.3 bits (102), Expect = 3e-13
Identities = 155/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 474653 TTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCA 474712
||| | || ||| | || ||| | |||||| | | || |||| ||| ||| ||
Sbjct 94191 TTTGCTCCCGAAGAGATCTCTGCCATGGTTCTTGGAAAGATGAGGGAAATCGCTGAATCG 94132
Query 474713 TATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCT 474772
|| || ||| ||||||| | | || || | ||||| || || || || || ||| |
Sbjct 94131 TACCTAGGAAAAGAAGTTAAGCACGCCGTCGTCACTGTCCCTGCTTACTTCAACGATGCC 94072
Query 474773 CAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATT 474832
|| ||||| || || || ||||| || ||| || ||| | || ||| | ||||| ||
Sbjct 94071 CAGCGTCAGGCGACCAAGGATGCCGGCGTAATCGCTGGTTTGAACGTTGTCCGTATCATC 94012
Query 474833 AATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
|| ||||| || || ||||| |||| || || |||||||||||
Sbjct 94011 AACGAACCTACTGCCGCCGCTATTGCCTACGGACTTGATAAGAA 93968
>seq4684
Length=226209
Score = 86.0 bits (94), Expect = 4e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692
|| || ||||| || || ||||| || || |||||||||||||||||||| |||||
Sbjct 8835 CCGGCGAAAATCAGTCGCTGTTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCC 8894
Query 480693 TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGA 480752
|||||| |||||| || || | | | || |||||||| || || || || | |
Sbjct 8895 TTGACATTTTCAATGGTGTCGGAGGCCTCAACCTCGAGGGTAATGGTCTTGCCAGTCAAA 8954
Query 480753 GTCTTAACGAAAATTTG 480769
||||| |||||||| ||
Sbjct 8955 GTCTTGACGAAAATCTG 8971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267928951433432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |