Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq2453 91.5 2e-13
>seq2453
Length=141900
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
||| | || || || | ||||||||||| |||||||||||||||||||| || || ||
Sbjct 111542 ACAGCGATTGGTCCGGCTCCAGGACCTCCGCCTCCATGTGGAATACAGAACGTTTTGTGG 111483
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| || ||||||| || || ||| ||||| | || || || || || |||
Sbjct 111482 AGGTTAAGATGACTGACGTCACTACCGTAGTCGCCCGGGCGGCACAGCCCGACTTGAGCA 111423
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| ||||| || || || || || || ||||| ||||| || |||| | || || |
Sbjct 111422 TTGAGATTAGCGCCGTCAAGGTAGACTTGACCGCCATTTTCGTGAATTTTGTTGCACACA 111363
Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415
| || | ||| ||||| || ||||| || ||||| || | ||||||
Sbjct 111362 TCAACAATAGAGGATTCGAATACTCCGTGAGTTGAAGGATAAGTCACCATAAT 111310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578956176541680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |