Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2453 91.5 2e-13 >seq2453 Length=141900 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | || || || | ||||||||||| |||||||||||||||||||| || || || Sbjct 111542 ACAGCGATTGGTCCGGCTCCAGGACCTCCGCCTCCATGTGGAATACAGAACGTTTTGTGG 111483 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||||| || || ||| ||||| | || || || || || ||| Sbjct 111482 AGGTTAAGATGACTGACGTCACTACCGTAGTCGCCCGGGCGGCACAGCCCGACTTGAGCA 111423 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || ||||| || || || || || || ||||| ||||| || |||| | || || | Sbjct 111422 TTGAGATTAGCGCCGTCAAGGTAGACTTGACCGCCATTTTCGTGAATTTTGTTGCACACA 111363 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 | || | ||| ||||| || ||||| || ||||| || | |||||| Sbjct 111362 TCAACAATAGAGGATTCGAATACTCCGTGAGTTGAAGGATAAGTCACCATAAT 111310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578956176541680