Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq328 181 1e-39
seq4415 156 5e-32
seq3537 141 1e-27
seq2312 140 4e-27
seq3781 129 7e-24
seq3346 129 7e-24
seq3808 127 2e-23
seq4725 87.8 2e-11
>seq328
Length=891
Score = 181 bits (200), Expect = 1e-39
Identities = 172/220 (78%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||||||||| ||| ||| || || |||| ||||||||| ||||| | | ||
Sbjct 50 GCTTGGCCAGTTCGCCAGGCAGGATGAGTCGGACGGAGGTCTGGATTTCGCGAGAGGAGA 109
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| ||||||| ||||||| ||||||| || ||||||| |||| |
Sbjct 110 TGGTCGAGCGCTTGTTGTAGTGCGCGAGACGGCTGGCCTCGTTGGCGATGCGCTCGAAGA 169
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||| ||||||||||||| |||||| | ||| ||||| || ||||||||
Sbjct 170 CGTCGTTGACGAACGAGTTCATGATCGACATGGCCTTCGACGAGATTCCAGTGTCGGGGT 229
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562
|||||||||||||||| ||||| | | |||||| ||
Sbjct 230 GCACCTGCTTGAGCACGCGGTAGACGTAGACCGAGTAGGA 269
>seq4415
Length=18448
Score = 156 bits (172), Expect = 5e-32
Identities = 152/196 (78%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || || ||| | | ||| |||||||||| ||||||||| ||||| | ||
Sbjct 6467 GCTTGGCGAGCTCTCCGGGGAGGATGAGGCGCACGGAGGTCTGGATTTCGCGGGACGAGA 6526
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
||||| ||||||||| |||| || || || ||| ||| | ||||||| |||| |
Sbjct 6527 TCGTGGAGCGCTTGTTGTAGTGGGCGAGGCGCGAGGCTTCGCCGGCGATGCGCTCGAAGA 6586
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||| || ||||||||||||| ||||||| |||| |||||| || ||||||||
Sbjct 6587 CGTCGTTCACGAACGAGTTCATGATGGACATCGCCTTGGAGGAGATTCCGGTGTCGGGGT 6646
Query 1254523 GCACCTGCTTGAGCAC 1254538
||||||||||||||||
Sbjct 6647 GCACCTGCTTGAGCAC 6662
>seq3537
Length=139359
Score = 141 bits (156), Expect = 1e-27
Identities = 164/219 (75%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 92603 GGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCG--GTCGGAAAACATGTCGACG 92660
|||||| || |||||| |||||||||||||| || ||| ||| ||| ||||||
Sbjct 73945 GGCGATTTGCTTGGTGAGGCGCTCCTGCACCTGGAGCCGACGTCCGAA--CATCTCGACG 74002
Query 92661 ATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCACGTGGGCC 92720
||||||| || ||||| ||||||| |||| | ||||||||||||| | ||| |
Sbjct 74003 ATGCGCGCGAGTTTGCTGAGGCCGAGGATCTTCTTGTTGGGCAGGTAGCCGATGTGCACT 74062
Query 92721 TTGCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTCGCGCACG 92780
||||| || ||||| | || ||||||||||| | ||||| || |||| |||||||||
Sbjct 74063 TTGCCGATGAAGGGGACAAGGTGGTGCTCGCAGAGAGAGAAGAACTCGATGTCGCGCACC 74122
Query 92781 ATCACCATCTCGCCCGAGGCCTCGGCAAAGAGCGCGTCG 92819
| |||||||||| | | ||||| | || | ||| |||
Sbjct 74123 AGCACCATCTCGTCGTGGTCCTCGTCGAACACCGCTTCG 74161
>seq2312
Length=17903
Score = 140 bits (154), Expect = 4e-27
Identities = 161/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
|||||| |||||| ||| || |||||||| ||||| ||||||||||| | | |||||
Sbjct 2471 TGGCCAACTCGCCGGGCAGAATGAGGCGCACCGCGGTTTGGATCTCGCGGGAGGAGATCG 2530
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
|| ||||||||| | |||| || || || ||| || ||||||| |||| | ||
Sbjct 2531 TGGAGCGCTTGTTATACTGCGTGAGGCGCGACGCTTCGCTGGCGATGCGCTCGAAGACGT 2590
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
|| ||| ||||||||||||| ||||| | ||| |||||||| ||| |||||||
Sbjct 2591 CGCCGACGAACGAGTTCATGATGGACATTGCCTTCGACGAGATGCCGGTGTCCGGGTGCA 2650
Query 1254526 CCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562
||||||| | ||| ||||||| | |||||| ||
Sbjct 2651 CCTGCTTCATCACGCGGTAGATGTAGACCGAGTAGGA 2687
Score = 86.0 bits (94), Expect = 8e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
|||||| |||||| ||| || |||||||||||||| ||||||||||| | | |||||
Sbjct 4880 TGGCCAACTCGCCGGGCAGAATGAGGCGCACGGCGGTTTGGATCTCGCGGGAGGAGATCG 4821
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
|| ||||||||| | |||| || || || ||| || ||||||| |||| | ||
Sbjct 4820 TGGAGCGCTTGTTGTACTGCGTGAGGCGCGACGCTTCGCTGGCGATGCGCTCGAAGACGT 4761
Query 1254466 CG 1254467
||
Sbjct 4760 CG 4759
>seq3781
Length=46925
Score = 129 bits (142), Expect = 7e-24
Identities = 146/196 (74%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||||||| ||| | | ||| || || ||||||||||| || ||||| | ||
Sbjct 45300 GCTTGGCCAGTTCACCGGGGAGGATGAGACGGACGGCGGTCTGAATTTCGCGGGATGAGA 45241
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||| || || || ||| || | | ||||| |||| |
Sbjct 45240 TGGTGGAGCGCTTGTTGTAGTGGGCGAGGCGCGAGGCTTCCTGGGCAATGCGTTCGAAGA 45181
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||| ||||| ||||||||||||| ||||| | ||| |||||| || ||||||||
Sbjct 45180 CGTCATTGACGAACGAGTTCATGATGGACATGGCCTTCGAGGAGATTCCAGTGTCGGGGT 45121
Query 1254523 GCACCTGCTTGAGCAC 1254538
||||||||||||| ||
Sbjct 45120 GCACCTGCTTGAGAAC 45105
>seq3346
Length=85265
Score = 129 bits (142), Expect = 7e-24
Identities = 150/198 (76%), Gaps = 6/198 (3%)
Strand=Plus/Minus
Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165
||||||| || |||||||| | ||||||||| || | | | || || ||| |
Sbjct 67832 AGAAGCGAACTGACGACATTCCCGAGTGGGACAAATCCTTCTTCAAGGTTGACCAGGGAA 67773
Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAA--GCCTCTGCTCGATCT 1592223
| || || ||| ||||| | ||||||||||||||||| ||| ||||| || || ||
Sbjct 67772 CGCTGTTCGAGCTGATCTTGGCCGCCAACTACCTCGAGATCCGCGGCCTC--CTGGA-CT 67716
Query 1592224 TGGG-TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGA 1592282
|||| |||||| |||||||||||||||||||||| ||| ||||| || |||||| ||
Sbjct 67715 TGGGATGCAAGACTGTGGCCAACATGATCAAGGGAAAGAGCCCCGAAGATATCCGCCGGA 67656
Query 1592283 CCTTTAACATCAAGTACG 1592300
| || ||||||||| |||
Sbjct 67655 CGTTCAACATCAAGAACG 67638
>seq3808
Length=33171
Score = 127 bits (140), Expect = 2e-23
Identities = 144/193 (75%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
|||| || ||||| | | ||| ||||| |||| ||||||||| ||||| | || |
Sbjct 18856 TGGCGAGCTCGCCAGGGAGGATGAGGCGGACGGAGGTCTGGATTTCGCGGGAAGAAATGG 18797
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| |||||||| |||| || ||||| ||| ||| | ||||||| || | | ||
Sbjct 18796 TCGATCGCTTGTTGTAGTGAGCGAGACGCGAGGCTTCGCCGGCGATGCGCTCAAAGACGT 18737
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| ||||||||||||| ||||| | ||| |||||||| |||||||||||
Sbjct 18736 CGTTGACGAACGAGTTCATGATGGACATTGCCTTCGACGAGATGCCGGTGTCGGGGTGCA 18677
Query 1254526 CCTGCTTGAGCAC 1254538
|||||||||||||
Sbjct 18676 CCTGCTTGAGCAC 18664
>seq4725
Length=10679
Score = 87.8 bits (96), Expect = 2e-11
Identities = 164/236 (69%), Gaps = 5/236 (2%)
Strand=Plus/Plus
Query 733031 CAACGGCGACGGCGCCAACGCCGTCAAGATC-GTGACGCGCGCCATGCGCCAGCCCGAGT 733089
|||| |||||||| ||| |||||| ||| | | | ||| | ||||| || |
Sbjct 558 CAACTGCGACGGCAACAAATTCGTCAAAATCCGCGTC-CGCTCAGTGCGCTTCCCTCAAA 616
Query 733090 TGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACCGTGGGCAGCGTGCGCTCCA 733149
| ||||||||| | | || || ||||| || ||||| || |||| | | || | |
Sbjct 617 TCGGCGACAAATTCGCTTCCCGGCACGGTCAGAAGGGAACGATGGGAATCATGTACCGCC 676
Query 733150 CCGAGGACATGCCCTGGTCGCCGCGCGGCGGCGCCACGCCCGACATCGTGATCAACCCGC 733209
||||||||||| | || | | ||| || ||||||||||| | |||||||| |
Sbjct 677 AGGAGGACATGCCGT--TCAC-GTGCGAGGGAATTTCGCCCGACATCATCATCAACCCCC 733
Query 733210 ACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCCCTCCTGGGCAAG 733265
||||| |||| || || |||||||| ||| | || ||||| ||||| ||| |||
Sbjct 734 ACGCCGTCCCCTCTCGTATGACCATTGGCCATTTGATCGAGTGCCTCCAGGGGAAG 789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106660434639378
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