Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq4743 179 3e-40
>seq4743
Length=155390
Score = 179 bits (198), Expect = 3e-40
Identities = 227/312 (73%), Gaps = 0/312 (0%)
Strand=Plus/Minus
Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379
||| ||||| || || || | | || | || || ||||| ||||| |||||||| |
Sbjct 110134 AGTTTCCGGATTATCGCACGCGGTGCAAAGAACGAATTTGCGAATGAATCCATCAAGGAT 110075
Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439
||||| | ||| | | |||||| ||||| ||||| | ||||| || |||| ||
Sbjct 110074 ATCCTGCAGTTTAGCCGCGTCGTGATCACCGTTCACGATATAGCGTTCATTCTTGTTGTC 110015
Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG 34499
|| | |||||| || || || ||||| || |||||||| |||||||| | | || ||
Sbjct 110014 GATGTTCGTTTGAGCTCCAAGTTCGCATCCAAAGTACTTGGTCGGGTAGGTTGGTGGTCG 109955
Query 34500 TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTT 34559
| |||| ||| || || || ||| || |||||||||||||||||||||| || ||
Sbjct 109954 CTCGAGCGACTTAGCAATGTCAACCATATTAGCGATGACAGTCTTGATGCCGTTTCCTTT 109895
Query 34560 TCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATT 34619
|||||||||||| || ||| || ||||| |||||||| ||||| | ||| |||||
Sbjct 109894 TCCTTCGACCTTCGCCATGATCCGAGGCATCTTGTAGCGATAGAAGGGGTCGAGAACATT 109835
Query 34620 GCGGTTAACGTT 34631
|| || |||||
Sbjct 109834 ACGATTTACGTT 109823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412812246188162
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |