Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4743 179 3e-40 >seq4743 Length=155390 Score = 179 bits (198), Expect = 3e-40 Identities = 227/312 (73%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379 ||| ||||| || || || | | || | || || ||||| ||||| |||||||| | Sbjct 110134 AGTTTCCGGATTATCGCACGCGGTGCAAAGAACGAATTTGCGAATGAATCCATCAAGGAT 110075 Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439 ||||| | ||| | | |||||| ||||| ||||| | ||||| || |||| || Sbjct 110074 ATCCTGCAGTTTAGCCGCGTCGTGATCACCGTTCACGATATAGCGTTCATTCTTGTTGTC 110015 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG 34499 || | |||||| || || || ||||| || |||||||| |||||||| | | || || Sbjct 110014 GATGTTCGTTTGAGCTCCAAGTTCGCATCCAAAGTACTTGGTCGGGTAGGTTGGTGGTCG 109955 Query 34500 TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTT 34559 | |||| ||| || || || ||| || |||||||||||||||||||||| || || Sbjct 109954 CTCGAGCGACTTAGCAATGTCAACCATATTAGCGATGACAGTCTTGATGCCGTTTCCTTT 109895 Query 34560 TCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATT 34619 |||||||||||| || ||| || ||||| |||||||| ||||| | ||| ||||| Sbjct 109894 TCCTTCGACCTTCGCCATGATCCGAGGCATCTTGTAGCGATAGAAGGGGTCGAGAACATT 109835 Query 34620 GCGGTTAACGTT 34631 || || ||||| Sbjct 109834 ACGATTTACGTT 109823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412812246188162