Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq328 232 1e-54 seq4415 219 7e-51 seq2312 181 2e-39 seq3781 179 6e-39 seq3808 174 2e-37 seq3346 147 3e-29 seq3537 134 2e-25 seq4725 96.9 5e-14 seq4639 95.1 2e-13 seq604 86.0 1e-10 >seq328 Length=891 Score = 232 bits (256), Expect = 1e-54 Identities = 209/261 (80%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||||||||| ||| Sbjct 11 TGTACTTGGTGACGGCCTTGGTTCCCTCGGAGACGGCGTGCTTGGCCAGTTCGCCAGGCA 70 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 ||| || || |||| ||||||||| ||||| | | ||| || |||||||| |||| Sbjct 71 GGATGAGTCGGACGGAGGTCTGGATTTCGCGAGAGGAGATGGTCGAGCGCTTGTTGTAGT 130 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 ||||| || |||| ||||||| || ||||||| |||| | ||||||||| |||||||| Sbjct 131 GCGCG--AGACGGCTGGCCTCGTTGGCGATGCGCTCGAAGACGTCGTTGACGAACGAGTT 188 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||||||||| | || ||||| || |||||||||||||||||||||||| Sbjct 189 CATGATCGACATGGCCTTCGACGAGATTCCAGTGTCGGGGTGCACCTGCTTGAGCACGCG 248 Query 1485708 GTAAACAAAGGACGAGTACGA 1485728 ||| || || |||||| || Sbjct 249 GTAGACGTAGACCGAGTAGGA 269 >seq4415 Length=18448 Score = 219 bits (242), Expect = 7e-51 Identities = 192/237 (81%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| |||| || || ||| | | Sbjct 6428 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCTCCGGGGA 6487 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 ||| |||||||||| ||||||||| ||||||| ||||||| |||||||| |||| Sbjct 6488 GGATGAGGCGCACGGAGGTCTGGATTTCGCGGGACGAGATCGTGGAGCGCTTGTTGTAGT 6547 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| ||| ||| | ||||||| |||| | |||||| || |||||||| Sbjct 6548 GGGCG--AGGCGCGAGGCTTCGCCGGCGATGCGCTCGAAGACGTCGTTCACGAACGAGTT 6605 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||||| ||||||| ||| |||||| || |||||||||||||||||||||||| Sbjct 6606 CATGATGGACATCGCCTTGGAGGAGATTCCGGTGTCGGGGTGCACCTGCTTGAGCAC 6662 >seq2312 Length=17903 Score = 181 bits (200), Expect = 2e-39 Identities = 181/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||| || ||||| ||||| ||||| |||||| |||||| ||| Sbjct 2429 TGTACTTGGTGACCGCCTTAGTGCCCTCGGAGACCGCGTGTTTGGCCAACTCGCCGGGCA 2488 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || |||||||| ||||| ||||||||||||| | ||||||| |||||||||| Sbjct 2489 GAATGAGGCGCACCGCGGTTTGGATCTCGCGGGAGGAGATCGTGGAGCGCTTGTTATACT 2548 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||| ||||| || ||| || ||||||| |||| | |||| ||| |||||||||| Sbjct 2549 GCGTGAGGCGCGACGCTTCGCTGGCGATGCGCTCGAAGACGTCGCCGACGAACGAGTTCA 2608 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||| ||||| | || |||||||| ||| |||||||||||||| | ||| Sbjct 2609 TGATGGACATTGCCTTCGACGAGATGCCGGTGTCCGGGTGCACCTGCTTCATCAC 2663 Score = 138 bits (152), Expect = 2e-26 Identities = 131/165 (79%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||||| ||||| |||||| |||||| ||| Sbjct 4922 TGTACTTGGTGACCGCCTTGGTGCCCTCGGAGACCGCGTGTTTGGCCAACTCGCCGGGCA 4863 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || |||||||||||||| ||||||||||||| | ||||||| ||||||||| || | Sbjct 4862 GAATGAGGCGCACGGCGGTTTGGATCTCGCGGGAGGAGATCGTGGAGCGCTTGTT-GTAC 4804 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1485633 ||| ||||| || ||| || ||||||| |||| | |||| Sbjct 4803 TGCGTGAGGCGCGACGCTTCGCTGGCGATGCGCTCGAAGACGTCG 4759 >seq3781 Length=46925 Score = 179 bits (198), Expect = 6e-39 Identities = 182/235 (77%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 |||||||| || |||||||| ||||| |||||||||||| |||||||||| ||| | | | Sbjct 45337 TACTTGGTAACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGTTCACCGGGGAGG 45278 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGTGC 1485589 || || || ||||||||||| || ||||||| ||| ||| ||||||||| |||| Sbjct 45277 ATGAGACGGACGGCGGTCTGAATTTCGCGGGATGAGATGGTGGAGCGCTTGTTGTAGTGG 45218 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||| ||||| ||| || | | ||||| |||| | ||| ||||| |||||||||| Sbjct 45217 GCG--AGGCGCGAGGCTTCCTGGGCAATGCGTTCGAAGACGTCATTGACGAACGAGTTCA 45160 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||| ||||| | || |||||| || ||||||||||||||||||||| || Sbjct 45159 TGATGGACATGGCCTTCGAGGAGATTCCAGTGTCGGGGTGCACCTGCTTGAGAAC 45105 >seq3808 Length=33171 Score = 174 bits (192), Expect = 2e-37 Identities = 182/237 (77%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| |||||||||||||| ||||| ||||||||||| |||| || ||||| | | Sbjct 18898 TGTACTTCGTGACGGCCTTGGTTCCCTCGGAGACGGCGTGTTTGGCGAGCTCGCCAGGGA 18839 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 ||| ||||| |||| ||||||||| ||||||| || || |||||||| ||| Sbjct 18838 GGATGAGGCGGACGGAGGTCTGGATTTCGCGGGAAGAAATGGTCGATCGCTTGTTGTAGT 18779 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| | ||| ||| ||| | ||||||| || | | ||||||||| |||||||| Sbjct 18778 GAGCGAGACGCGA--GGCTTCGCCGGCGATGCGCTCAAAGACGTCGTTGACGAACGAGTT 18721 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||||| ||||| | || |||||||| |||||||||||||||||||||||| Sbjct 18720 CATGATGGACATTGCCTTCGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCAC 18664 >seq3346 Length=85265 Score = 147 bits (162), Expect = 3e-29 Identities = 150/196 (77%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || ||||| || ||||||||| | ||||||||| |||| | | |||| ||||| Sbjct 67833 GAGAAGCGAACTGACGACATTCCCGAGTGGGACAAATCCTTCTTCAAGGTTGACCAGGGA 67774 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 || || || ||| ||||| | ||||||||||||||||| ||| |||||| || ||| Sbjct 67773 ACGCTGTTCGAGCTGATCTTGGCCGCCAACTACCTCGAGATCCGCGGCCTCCTGGACTTG 67714 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 || |||||||| ||||||||| | |||||||| ||| ||||| || |||||| ||| Sbjct 67713 GGATGCAAGACTGTGGCCAACATGATCAAGGGAAAGAGCCCCGAAGATATCCGCCGGACG 67654 Query 2035746 TTTAACATCAAGTACG 2035761 || ||||||||| ||| Sbjct 67653 TTCAACATCAAGAACG 67638 >seq3537 Length=139359 Score = 134 bits (148), Expect = 2e-25 Identities = 146/192 (76%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 118709 GGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAGCG--GTCCGAGAGCATGTCGACG 118766 |||||| || ||||| |||||||||||||| || |||| || ||| |||||| Sbjct 73945 GGCGATTTGCTTGGTGAGGCGCTCCTGCACCTGGAGCCGACGTCC--GAACATCTCGACG 74002 Query 118767 ATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACGTGCGCC 118826 ||||||| || ||||| ||||||| |||| | |||||||||||| | |||| | Sbjct 74003 ATGCGCGCGAGTTTGCTGAGGCCGAGGATCTTCTTGTTGGGCAGGTAGCCGATGTGCACT 74062 Query 118827 TTGCCGATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCAATGTCGCGCACG 118886 |||||||| ||||| | || ||||||||||| | ||||| || || ||||||||||| Sbjct 74063 TTGCCGATGAAGGGGACAAGGTGGTGCTCGCAGAGAGAGAAGAACTCGATGTCGCGCACC 74122 Query 118887 GTCACCATCTCG 118898 |||||||||| Sbjct 74123 AGCACCATCTCG 74134 >seq4725 Length=10679 Score = 96.9 bits (106), Expect = 5e-14 Identities = 166/236 (70%), Gaps = 5/236 (2%) Strand=Plus/Plus Query 653596 CAACGGCGACGGCGCCAACGCGGTCAAGATCGTCACCCGCGCCATGCGCCAGCCCGAGGT 653655 |||| |||||||| ||| ||||| ||| | |||| | ||||| || | | Sbjct 558 CAACTGCGACGGCAACAAATTCGTCAAAATCCGCGTCCGCTCAGTGCGCTTCCCTCAAAT 617 Query 653656 GGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGGCAGCGTGCGCTCGAC 653715 ||||||||| | | || || ||||| || ||||| || |||| | | || | || | Sbjct 618 CGGCGACAAATTCGCTTCCCGGCACGGTCAGAAGGGAACGATGGGAATCATGTAC-CGCC 676 Query 653716 CG-AGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCGTCATCAACCCGC 653774 | |||| ||||||| || | | ||| ||| ||||||||||| |||||||||| | Sbjct 677 AGGAGGACATGCCGT--TCAC-GTGCGAGGGAATTTCGCCCGACATCATCATCAACCCCC 733 Query 653775 ACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTCCTGGGCAAG 653830 ||||| |||| || || |||||||| ||| | |||| ||| ||||| ||| ||| Sbjct 734 ACGCCGTCCCCTCTCGTATGACCATTGGCCATTTGATCGAGTGCCTCCAGGGGAAG 789 >seq4639 Length=501560 Score = 95.1 bits (104), Expect = 2e-13 Identities = 162/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || |||||| |||||| || || ||||| |||||||||||| ||| ||||| ||| | | Sbjct 60758 TGAACTTGGAGACGGCTTTCGTTCCCTCAGAGACGGCGTGCTTGGAAAGTTCACCGGGGA 60699 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGG-TGCCGATCGTGTTGCGCTTGTTAGTG 1485588 || || || | || ||||| | ||||||| || | | | | ||| |||||| Sbjct 60698 GGAGGAGACGAATAGCAGTCTGCACTTCGCGGGATGACAA----GGTCATCTTCTTAGTG 60643 Query 1485589 ---CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAG 1485645 ||| ||| |||| || | ||||||| |||| | ||| || || |||| Sbjct 60642 AGATGCGTCAGCTTCGCGGCTTCTCCGGCGATGCGTTCGAAGAGATCGATGCAAATCGAG 60583 Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTT 1485698 || | ||||||||| | ||| |||| | |||| |||||||| |||||||| Sbjct 60582 TTGAGGATCGACATGGCCTTGCTGGAAACGCCCTTCTCGGGGTGGACCTGCTT 60530 >seq604 Length=25766 Score = 86.0 bits (94), Expect = 1e-10 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 429527 CGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCCGTCGCTCCA 429586 ||||||||| ||| ||||| |||||| | ||| | ||||||||||| | ||||| Sbjct 20053 CGTCGAGCGACACATGCGCGATGGCGACATTATTGTCTTCAACCGGCAGCCAACTCTCCA 20112 Query 429587 CATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCC-GGTCGCACCTTCCGGCTCA 429645 || | | ||| | ||||| ||| | | | || ||||| || ||||| | | Sbjct 20113 CAAGATGAGTATGATGGGCCACAGAGTGAAGATCCTTCCATGGTCG-ACGTTCCGCATGA 20171 Query 429646 ACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACG 429705 | || |||| || |||||||||| ||||| ||||||||||||||||| ||||| Sbjct 20172 ATCTCTCCGTCACCACGCCCTACAACGCTGACTTCGACGGCGACGAGATGAATCTGCATC 20231 Query 429706 TGCCCCAGTCG 429716 | || |||||| Sbjct 20232 TTCCGCAGTCG 20242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915625810811126