Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq328 232 1e-54
seq4415 219 7e-51
seq2312 181 2e-39
seq3781 179 6e-39
seq3808 174 2e-37
seq3346 147 3e-29
seq3537 134 2e-25
seq4725 96.9 5e-14
seq4639 95.1 2e-13
seq604 86.0 1e-10
>seq328
Length=891
Score = 232 bits (256), Expect = 1e-54
Identities = 209/261 (80%), Gaps = 4/261 (2%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| |||||||||||| ||||||||||||| |||
Sbjct 11 TGTACTTGGTGACGGCCTTGGTTCCCTCGGAGACGGCGTGCTTGGCCAGTTCGCCAGGCA 70
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587
||| || || |||| ||||||||| ||||| | | ||| || |||||||| ||||
Sbjct 71 GGATGAGTCGGACGGAGGTCTGGATTTCGCGAGAGGAGATGGTCGAGCGCTTGTTGTAGT 130
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
||||| || |||| ||||||| || ||||||| |||| | ||||||||| ||||||||
Sbjct 131 GCGCG--AGACGGCTGGCCTCGTTGGCGATGCGCTCGAAGACGTCGTTGACGAACGAGTT 188
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707
|||||||||||| | || ||||| || ||||||||||||||||||||||||
Sbjct 189 CATGATCGACATGGCCTTCGACGAGATTCCAGTGTCGGGGTGCACCTGCTTGAGCACGCG 248
Query 1485708 GTAAACAAAGGACGAGTACGA 1485728
||| || || |||||| ||
Sbjct 249 GTAGACGTAGACCGAGTAGGA 269
>seq4415
Length=18448
Score = 219 bits (242), Expect = 7e-51
Identities = 192/237 (81%), Gaps = 4/237 (2%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| |||||||||||| |||| || || ||| | |
Sbjct 6428 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCTCCGGGGA 6487
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587
||| |||||||||| ||||||||| ||||||| ||||||| |||||||| ||||
Sbjct 6488 GGATGAGGCGCACGGAGGTCTGGATTTCGCGGGACGAGATCGTGGAGCGCTTGTTGTAGT 6547
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
| ||| ||||| ||| ||| | ||||||| |||| | |||||| || ||||||||
Sbjct 6548 GGGCG--AGGCGCGAGGCTTCGCCGGCGATGCGCTCGAAGACGTCGTTCACGAACGAGTT 6605
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
|||||| ||||||| ||| |||||| || ||||||||||||||||||||||||
Sbjct 6606 CATGATGGACATCGCCTTGGAGGAGATTCCGGTGTCGGGGTGCACCTGCTTGAGCAC 6662
>seq2312
Length=17903
Score = 181 bits (200), Expect = 2e-39
Identities = 181/235 (77%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| ||||| || ||||| ||||| ||||| |||||| |||||| |||
Sbjct 2429 TGTACTTGGTGACCGCCTTAGTGCCCTCGGAGACCGCGTGTTTGGCCAACTCGCCGGGCA 2488
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| |||||||| ||||| ||||||||||||| | ||||||| ||||||||||
Sbjct 2489 GAATGAGGCGCACCGCGGTTTGGATCTCGCGGGAGGAGATCGTGGAGCGCTTGTTATACT 2548
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||| ||||| || ||| || ||||||| |||| | |||| ||| ||||||||||
Sbjct 2549 GCGTGAGGCGCGACGCTTCGCTGGCGATGCGCTCGAAGACGTCGCCGACGAACGAGTTCA 2608
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
|||| ||||| | || |||||||| ||| |||||||||||||| | |||
Sbjct 2609 TGATGGACATTGCCTTCGACGAGATGCCGGTGTCCGGGTGCACCTGCTTCATCAC 2663
Score = 138 bits (152), Expect = 2e-26
Identities = 131/165 (79%), Gaps = 2/165 (1%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| ||||| ||||| |||||| |||||| |||
Sbjct 4922 TGTACTTGGTGACCGCCTTGGTGCCCTCGGAGACCGCGTGTTTGGCCAACTCGCCGGGCA 4863
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| |||||||||||||| ||||||||||||| | ||||||| ||||||||| || |
Sbjct 4862 GAATGAGGCGCACGGCGGTTTGGATCTCGCGGGAGGAGATCGTGGAGCGCTTGTT-GTAC 4804
Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1485633
||| ||||| || ||| || ||||||| |||| | ||||
Sbjct 4803 TGCGTGAGGCGCGACGCTTCGCTGGCGATGCGCTCGAAGACGTCG 4759
>seq3781
Length=46925
Score = 179 bits (198), Expect = 6e-39
Identities = 182/235 (77%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531
|||||||| || |||||||| ||||| |||||||||||| |||||||||| ||| | | |
Sbjct 45337 TACTTGGTAACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGTTCACCGGGGAGG 45278
Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGTGC 1485589
|| || || ||||||||||| || ||||||| ||| ||| ||||||||| ||||
Sbjct 45277 ATGAGACGGACGGCGGTCTGAATTTCGCGGGATGAGATGGTGGAGCGCTTGTTGTAGTGG 45218
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||| ||||| ||| || | | ||||| |||| | ||| ||||| ||||||||||
Sbjct 45217 GCG--AGGCGCGAGGCTTCCTGGGCAATGCGTTCGAAGACGTCATTGACGAACGAGTTCA 45160
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
|||| ||||| | || |||||| || ||||||||||||||||||||| ||
Sbjct 45159 TGATGGACATGGCCTTCGAGGAGATTCCAGTGTCGGGGTGCACCTGCTTGAGAAC 45105
>seq3808
Length=33171
Score = 174 bits (192), Expect = 2e-37
Identities = 182/237 (77%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||| |||||||||||||| ||||| ||||||||||| |||| || ||||| | |
Sbjct 18898 TGTACTTCGTGACGGCCTTGGTTCCCTCGGAGACGGCGTGTTTGGCGAGCTCGCCAGGGA 18839
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587
||| ||||| |||| ||||||||| ||||||| || || |||||||| |||
Sbjct 18838 GGATGAGGCGGACGGAGGTCTGGATTTCGCGGGAAGAAATGGTCGATCGCTTGTTGTAGT 18779
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
| ||| | ||| ||| ||| | ||||||| || | | ||||||||| ||||||||
Sbjct 18778 GAGCGAGACGCGA--GGCTTCGCCGGCGATGCGCTCAAAGACGTCGTTGACGAACGAGTT 18721
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
|||||| ||||| | || |||||||| ||||||||||||||||||||||||
Sbjct 18720 CATGATGGACATTGCCTTCGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCAC 18664
>seq3346
Length=85265
Score = 147 bits (162), Expect = 3e-29
Identities = 150/196 (77%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625
|| ||||| || ||||||||| | ||||||||| |||| | | |||| |||||
Sbjct 67833 GAGAAGCGAACTGACGACATTCCCGAGTGGGACAAATCCTTCTTCAAGGTTGACCAGGGA 67774
Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685
|| || || ||| ||||| | ||||||||||||||||| ||| |||||| || |||
Sbjct 67773 ACGCTGTTCGAGCTGATCTTGGCCGCCAACTACCTCGAGATCCGCGGCCTCCTGGACTTG 67714
Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745
|| |||||||| ||||||||| | |||||||| ||| ||||| || |||||| |||
Sbjct 67713 GGATGCAAGACTGTGGCCAACATGATCAAGGGAAAGAGCCCCGAAGATATCCGCCGGACG 67654
Query 2035746 TTTAACATCAAGTACG 2035761
|| ||||||||| |||
Sbjct 67653 TTCAACATCAAGAACG 67638
>seq3537
Length=139359
Score = 134 bits (148), Expect = 2e-25
Identities = 146/192 (76%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 118709 GGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAGCG--GTCCGAGAGCATGTCGACG 118766
|||||| || ||||| |||||||||||||| || |||| || ||| ||||||
Sbjct 73945 GGCGATTTGCTTGGTGAGGCGCTCCTGCACCTGGAGCCGACGTCC--GAACATCTCGACG 74002
Query 118767 ATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACGTGCGCC 118826
||||||| || ||||| ||||||| |||| | |||||||||||| | |||| |
Sbjct 74003 ATGCGCGCGAGTTTGCTGAGGCCGAGGATCTTCTTGTTGGGCAGGTAGCCGATGTGCACT 74062
Query 118827 TTGCCGATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCAATGTCGCGCACG 118886
|||||||| ||||| | || ||||||||||| | ||||| || || |||||||||||
Sbjct 74063 TTGCCGATGAAGGGGACAAGGTGGTGCTCGCAGAGAGAGAAGAACTCGATGTCGCGCACC 74122
Query 118887 GTCACCATCTCG 118898
||||||||||
Sbjct 74123 AGCACCATCTCG 74134
>seq4725
Length=10679
Score = 96.9 bits (106), Expect = 5e-14
Identities = 166/236 (70%), Gaps = 5/236 (2%)
Strand=Plus/Plus
Query 653596 CAACGGCGACGGCGCCAACGCGGTCAAGATCGTCACCCGCGCCATGCGCCAGCCCGAGGT 653655
|||| |||||||| ||| ||||| ||| | |||| | ||||| || | |
Sbjct 558 CAACTGCGACGGCAACAAATTCGTCAAAATCCGCGTCCGCTCAGTGCGCTTCCCTCAAAT 617
Query 653656 GGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGGCAGCGTGCGCTCGAC 653715
||||||||| | | || || ||||| || ||||| || |||| | | || | || |
Sbjct 618 CGGCGACAAATTCGCTTCCCGGCACGGTCAGAAGGGAACGATGGGAATCATGTAC-CGCC 676
Query 653716 CG-AGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCGTCATCAACCCGC 653774
| |||| ||||||| || | | ||| ||| ||||||||||| |||||||||| |
Sbjct 677 AGGAGGACATGCCGT--TCAC-GTGCGAGGGAATTTCGCCCGACATCATCATCAACCCCC 733
Query 653775 ACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTCCTGGGCAAG 653830
||||| |||| || || |||||||| ||| | |||| ||| ||||| ||| |||
Sbjct 734 ACGCCGTCCCCTCTCGTATGACCATTGGCCATTTGATCGAGTGCCTCCAGGGGAAG 789
>seq4639
Length=501560
Score = 95.1 bits (104), Expect = 2e-13
Identities = 162/233 (70%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||||| |||||| || || ||||| |||||||||||| ||| ||||| ||| | |
Sbjct 60758 TGAACTTGGAGACGGCTTTCGTTCCCTCAGAGACGGCGTGCTTGGAAAGTTCACCGGGGA 60699
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGG-TGCCGATCGTGTTGCGCTTGTTAGTG 1485588
|| || || | || ||||| | ||||||| || | | | | ||| ||||||
Sbjct 60698 GGAGGAGACGAATAGCAGTCTGCACTTCGCGGGATGACAA----GGTCATCTTCTTAGTG 60643
Query 1485589 ---CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAG 1485645
||| ||| |||| || | ||||||| |||| | ||| || || ||||
Sbjct 60642 AGATGCGTCAGCTTCGCGGCTTCTCCGGCGATGCGTTCGAAGAGATCGATGCAAATCGAG 60583
Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTT 1485698
|| | ||||||||| | ||| |||| | |||| |||||||| ||||||||
Sbjct 60582 TTGAGGATCGACATGGCCTTGCTGGAAACGCCCTTCTCGGGGTGGACCTGCTT 60530
>seq604
Length=25766
Score = 86.0 bits (94), Expect = 1e-10
Identities = 135/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 429527 CGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCCGTCGCTCCA 429586
||||||||| ||| ||||| |||||| | ||| | ||||||||||| | |||||
Sbjct 20053 CGTCGAGCGACACATGCGCGATGGCGACATTATTGTCTTCAACCGGCAGCCAACTCTCCA 20112
Query 429587 CATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCC-GGTCGCACCTTCCGGCTCA 429645
|| | | ||| | ||||| ||| | | | || ||||| || ||||| | |
Sbjct 20113 CAAGATGAGTATGATGGGCCACAGAGTGAAGATCCTTCCATGGTCG-ACGTTCCGCATGA 20171
Query 429646 ACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACG 429705
| || |||| || |||||||||| ||||| ||||||||||||||||| |||||
Sbjct 20172 ATCTCTCCGTCACCACGCCCTACAACGCTGACTTCGACGGCGACGAGATGAATCTGCATC 20231
Query 429706 TGCCCCAGTCG 429716
| || ||||||
Sbjct 20232 TTCCGCAGTCG 20242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915625810811126
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |