Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq616 134 9e-27
seq5007 122 6e-23
seq611 120 2e-22
seq311 91.5 1e-13
seq3195 82.4 5e-11
>seq616
Length=1528
Score = 134 bits (148), Expect = 9e-27
Identities = 160/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| ||||||||||||||| ||||| || | |||| ||||
Sbjct 1116 AGGACGAGATGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCC 1175
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||||||||||||||||| ||| ||||||||| | || | || ||||||||
Sbjct 1176 TCGAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCT 1235
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || |||||| || || || | ||| | | || || |||| || || |
Sbjct 1236 TGGATCTTGGCTTTGAC--ATTCTCGATGGTGTCAGAGCCTTCAACTTCAAGAGTAATCG 1293
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||||| ||||| ||||| || ||||||||||||
Sbjct 1294 TCTTTCCGGTGAGCGTCTTGACGAAGATCTGCATG 1328
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| |||||||| ||||| ||||| || | |||| ||||
Sbjct 154 AGGACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGACCATCC 213
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||||||||| || || || ||||||||| | || | || || |||||
Sbjct 214 TCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCC 273
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | | || | ||| | ||||||| || | ||| || |||
Sbjct 274 TGGATCTTGGCTTTGACATTTTCGATGGTATCAGAGCCCTCGACCTCCAGGGTAATCGTC 333
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || ||||||||||| || ||||||||||||
Sbjct 334 TTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 366
Score = 118 bits (130), Expect = 7e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| |||||||| || || ||||| || ||| |||| ||||
Sbjct 888 AGGACGAGGTGGAGGGTCGATTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGACCATCT 947
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||||||||||||||||| ||| ||||||||| | || | || || || ||
Sbjct 948 TCCAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTATCC 1007
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | | || || || | || ||||||
Sbjct 1008 TGGATCTTGGCCTTCACGTTCTCAATCGTGTCGGAGCCTTCCACTTCCAGAGTGATGGTC 1067
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || || | |||||| |||||||||||||||
Sbjct 1068 TTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1100
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | |||| || ||||| ||||| |||||||| ||| |||| ||||
Sbjct 382 AGGACGAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATCC 441
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||||||||| || || || ||||||||| | || | || ||||||||
Sbjct 442 TCAAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCT 501
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | | || || || | ||| || |||
Sbjct 502 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCCGAGCCTTCCACTTCCAAGGTGATCGTC 561
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||| || || || |||||||||||
Sbjct 562 TTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 593
>seq5007
Length=89527
Score = 122 bits (134), Expect = 6e-23
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806
|||||| || | || | ||||| || || | ||| ||| ||||||||||| |||||
Sbjct 22028 ATTTCCCCCACGCAGACGAAGGACGAGATGGAGGGTCGACTCTTTCTGAATGTTGTAGTC 22087
Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866
|| || |||| | || || |||||||||||||||||||| || || ||||||||| |
Sbjct 22088 GGAGAGCGTGCGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGG 22147
Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTC 34926
|| | || |||||||| | || || || ||| | || | || | ||||
Sbjct 22148 AGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAGCCCTC 22207
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || | || || ||||| || |||||||| || |||||||||||||||
Sbjct 22208 AACCTCGAGCGTGATCGTCTTCCCTGTGAGGGTTTTCACAAAGATCTGCATG 22259
Score = 114 bits (126), Expect = 8e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| ||| ||||| ||||| ||||| || || |||| | ||
Sbjct 22275 AGGACGAGATGGAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCGTCC 22334
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||||||||||||||| || || ||||||||| | || | || ||||||||
Sbjct 22335 TCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCT 22394
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | | ||||| || | || || |||
Sbjct 22395 TGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAGCCTTCGACCTCGAGCGTGATCGTC 22454
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || |||||||| || |||||||||||||||
Sbjct 22455 TTCCCTGTGAGGGTTTTCACAAAGATCTGCATG 22487
>seq611
Length=17302
Score = 120 bits (132), Expect = 2e-22
Identities = 144/194 (74%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| |||||||| ||| |||| |||| || || ||||||||||||||
Sbjct 9672 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAA 9731
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||| || || ||||| ||| | || | || |||||||| | || || || || |
Sbjct 9732 GATGAGGCGCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTCAC--A 9789
Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| || || | || |||||||| || | ||| |||||||| || |||||||| ||
Sbjct 9790 TTCTCGATGGTGTCCGAAGCCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTC 9849
Query 34964 ACAAAGATCTGCAT 34977
|| ||||| |||||
Sbjct 9850 ACGAAGATTTGCAT 9863
Score = 116 bits (128), Expect = 2e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | |||| || ||||| ||||| ||||| || | |||| ||||
Sbjct 5969 AGGACCAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGACAAAGTGCGACCATCC 6028
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||| ||||| || ||||||||| | || | || ||||| ||
Sbjct 6029 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTATCT 6088
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| || ||| | |||| ||| | | ||||| |||| || || |||
Sbjct 6089 TGGATTTTGGCCTTCACGTTCTCAATCGTGTCAGAGCCTTCGACCTCAAGAGTGATCGTC 6148
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTG 34974
||||| ||||| || || || ||||||||
Sbjct 6149 TTTCCGGTGAGCGTTTTGACGAAGATCTG 6177
Score = 114 bits (126), Expect = 8e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || |||||||| ||||| |||||||| ||| |||| ||||
Sbjct 4407 AGGACGAGGTGGAGCGTTGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCATCC 4466
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||||||||||||||| || || || |||||| | || | || ||||||||
Sbjct 4467 TCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGGGGAATTCCTTCCTTGTCT 4526
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | ||||| || | ||| ||||||
Sbjct 4527 TGGATCTTGGCCTTCACGTTCTCGATAGTGTCCGATCCTTCGACTTCCAGGGTAATGGTC 4586
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || ||||| ||||| || || |||||||||
Sbjct 4587 TTGCCAGTGAGCGTCTTCACGAAAATCTGCATG 4619
Score = 114 bits (126), Expect = 8e-21
Identities = 141/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| ||||| || | |||| |||| ||||| || |||||||||||
Sbjct 5140 CTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCATCTTCCAGCTGTTTTCCGGCGAA 5199
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||| || || ||||||||| | || | || |||||||| | ||||| || |||
Sbjct 5200 GATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATTTTGGCCTTCACGTT 5259
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | || | || || |||| ||| ||||| ||||| ||||| ||||| ||
Sbjct 5260 CTCAATGGTATCGGAACCTTCAACCTCAAGGGTGATGGTTTTTCCTGTGAGCGTCTTCAC 5319
Query 34966 AAAGATCTGCATG 34978
||||||||||||
Sbjct 5320 GAAGATCTGCATG 5332
Score = 114 bits (126), Expect = 8e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| |||||||||||||| || ||||| ||| |||| ||||
Sbjct 5348 AGGACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCT 5407
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||||||||||||||||| ||| ||||| ||| | || | || ||||| ||
Sbjct 5408 TCCAACTGCTTTCCGGCGAAGATCAATCGCTGCTGATCTGGGGGAATTCCTTCCTTATCT 5467
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | || || |||| ||| |||||
Sbjct 5468 TGGATCTTGGCCTTCACGTTCTCGATGGTATCCGAACCTTCAACCTCAAGGGTGATGGTT 5527
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| ||||| || || || ||||||||||||
Sbjct 5528 TTTCCGGTGAGCGTTTTGACGAAGATCTGCATG 5560
Score = 114 bits (126), Expect = 8e-21
Identities = 135/183 (74%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| |||||||| || |||| |||| ||||| ||||||||||||||
Sbjct 9267 CTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 9326
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|| || || ||||||||| | || | || |||||||| | || || |||||
Sbjct 9327 AATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 9386
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || | || | || || || | ||| ||||||||||| ||||||||||| ||
Sbjct 9387 TTCAATAGTGTCGGAACCTTCAACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTCAC 9446
Query 34966 AAA 34968
||
Sbjct 9447 GAA 9449
Score = 93.3 bits (102), Expect = 3e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|||||||| || | || ||||||||| ||||| ||||| || || |||| ||||
Sbjct 6247 AGGACCAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCATCC 6306
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||||||||||||||| || || ||||||||| | || | || ||||||||
Sbjct 6307 TCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTC 6365
>seq311
Length=48857
Score = 91.5 bits (100), Expect = 1e-13
Identities = 132/186 (71%), Gaps = 8/186 (4%)
Strand=Plus/Minus
Query 34796 ATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGT 34855
||||| ||||| ||| | || | || || || ||||||||||||||||||| ||
Sbjct 16787 ATGTTGTAGTCGTTGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAGCGC 16728
Query 34856 TGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT 34915
||||| ||| | || | |||||||| || | || || || ||| | |||||
Sbjct 16727 TGCTGATCTGGAGGAATGCCCTCCTTATCCTGGATCTTGGCCTTCACGT----TCTCGAT 16672
Query 34916 ----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGAT 34971
||| || ||||| || | ||| |||||||| || ||||||||||| || |||||
Sbjct 16671 GCTGTCAGAAGCTTCGACTTCGAGGGTAATGGTCTTCCCGGTGAGGGTCTTCACGAAGAT 16612
Query 34972 CTGCAT 34977
||||||
Sbjct 16611 CTGCAT 16606
>seq3195
Length=29224
Score = 82.4 bits (90), Expect = 5e-11
Identities = 107/146 (73%), Gaps = 4/146 (3%)
Strand=Plus/Plus
Query 34834 CTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTT 34893
||| |||||||||||||| || ||||||||| | || | || |||||||| | || ||
Sbjct 25025 CTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 25084
Query 34894 TTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951
|||||| || || || | || |||||||| || | ||| || ||||| |||
Sbjct 25085 GGCTTTGAC--ATTCTCGATAGTGTCCGAAGCCTCGACCTCGAGGGTAATTGTCTTACCC 25142
Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||||| || || || ||||||||
Sbjct 25143 GTTAGGGTTTTGACGAAAATCTGCAT 25168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325669642631246
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