Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq616 134 9e-27 seq5007 122 6e-23 seq611 120 2e-22 seq311 91.5 1e-13 seq3195 82.4 5e-11 >seq616 Length=1528 Score = 134 bits (148), Expect = 9e-27 Identities = 160/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| ||||||||||||||| ||||| || | |||| |||| Sbjct 1116 AGGACGAGATGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCC 1175 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||||| ||| ||||||||| | || | || |||||||| Sbjct 1176 TCGAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCT 1235 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || |||||| || || || | ||| | | || || |||| || || | Sbjct 1236 TGGATCTTGGCTTTGAC--ATTCTCGATGGTGTCAGAGCCTTCAACTTCAAGAGTAATCG 1293 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||||| ||||| ||||| || |||||||||||| Sbjct 1294 TCTTTCCGGTGAGCGTCTTGACGAAGATCTGCATG 1328 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| |||||||| ||||| ||||| || | |||| |||| Sbjct 154 AGGACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGACCATCC 213 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||||||||| || || || ||||||||| | || | || || ||||| Sbjct 214 TCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCC 273 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | | || | ||| | ||||||| || | ||| || ||| Sbjct 274 TGGATCTTGGCTTTGACATTTTCGATGGTATCAGAGCCCTCGACCTCCAGGGTAATCGTC 333 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||||||||| || |||||||||||| Sbjct 334 TTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 366 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| |||||||| || || ||||| || ||| |||| |||| Sbjct 888 AGGACGAGGTGGAGGGTCGATTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGACCATCT 947 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||||||||||||||||| ||| ||||||||| | || | || || || || Sbjct 948 TCCAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTATCC 1007 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || | | || || || | || |||||| Sbjct 1008 TGGATCTTGGCCTTCACGTTCTCAATCGTGTCGGAGCCTTCCACTTCCAGAGTGATGGTC 1067 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || | |||||| ||||||||||||||| Sbjct 1068 TTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1100 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| || ||||| ||||| |||||||| ||| |||| |||| Sbjct 382 AGGACGAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATCC 441 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||||||||| || || || ||||||||| | || | || |||||||| Sbjct 442 TCAAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCT 501 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || | | || || || | ||| || ||| Sbjct 502 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCCGAGCCTTCCACTTCCAAGGTGATCGTC 561 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| || || || ||||||||||| Sbjct 562 TTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 593 >seq5007 Length=89527 Score = 122 bits (134), Expect = 6e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806 |||||| || | || | ||||| || || | ||| ||| ||||||||||| ||||| Sbjct 22028 ATTTCCCCCACGCAGACGAAGGACGAGATGGAGGGTCGACTCTTTCTGAATGTTGTAGTC 22087 Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866 || || |||| | || || |||||||||||||||||||| || || ||||||||| | Sbjct 22088 GGAGAGCGTGCGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGG 22147 Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTC 34926 || | || |||||||| | || || || ||| | || | || | |||| Sbjct 22148 AGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAGCCCTC 22207 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || | || || ||||| || |||||||| || ||||||||||||||| Sbjct 22208 AACCTCGAGCGTGATCGTCTTCCCTGTGAGGGTTTTCACAAAGATCTGCATG 22259 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| ||| ||||| ||||| ||||| || || |||| | || Sbjct 22275 AGGACGAGATGGAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCGTCC 22334 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||||||||||||||| || || ||||||||| | || | || |||||||| Sbjct 22335 TCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCT 22394 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || | | ||||| || | || || ||| Sbjct 22395 TGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAGCCTTCGACCTCGAGCGTGATCGTC 22454 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || |||||||| || ||||||||||||||| Sbjct 22455 TTCCCTGTGAGGGTTTTCACAAAGATCTGCATG 22487 >seq611 Length=17302 Score = 120 bits (132), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| |||||||| ||| |||| |||| || || |||||||||||||| Sbjct 9672 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAA 9731 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||| ||| | || | || |||||||| | || || || || | Sbjct 9732 GATGAGGCGCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTCAC--A 9789 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || || | || |||||||| || | ||| |||||||| || |||||||| || Sbjct 9790 TTCTCGATGGTGTCCGAAGCCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTC 9849 Query 34964 ACAAAGATCTGCAT 34977 || ||||| ||||| Sbjct 9850 ACGAAGATTTGCAT 9863 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| || ||||| ||||| ||||| || | |||| |||| Sbjct 5969 AGGACCAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGACAAAGTGCGACCATCC 6028 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| ||||| || ||||||||| | || | || ||||| || Sbjct 6029 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTATCT 6088 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || ||| | |||| ||| | | ||||| |||| || || ||| Sbjct 6089 TGGATTTTGGCCTTCACGTTCTCAATCGTGTCAGAGCCTTCGACCTCAAGAGTGATCGTC 6148 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTG 34974 ||||| ||||| || || || |||||||| Sbjct 6149 TTTCCGGTGAGCGTTTTGACGAAGATCTG 6177 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || |||||||| ||||| |||||||| ||| |||| |||| Sbjct 4407 AGGACGAGGTGGAGCGTTGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCATCC 4466 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||| || || || |||||| | || | || |||||||| Sbjct 4467 TCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGGGGAATTCCTTCCTTGTCT 4526 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || | ||||| || | ||| |||||| Sbjct 4527 TGGATCTTGGCCTTCACGTTCTCGATAGTGTCCGATCCTTCGACTTCCAGGGTAATGGTC 4586 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||| ||||| || || ||||||||| Sbjct 4587 TTGCCAGTGAGCGTCTTCACGAAAATCTGCATG 4619 Score = 114 bits (126), Expect = 8e-21 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || | |||| |||| ||||| || ||||||||||| Sbjct 5140 CTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCATCTTCCAGCTGTTTTCCGGCGAA 5199 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||||||| | || | || |||||||| | ||||| || ||| Sbjct 5200 GATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATTTTGGCCTTCACGTT 5259 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | || || |||| ||| ||||| ||||| ||||| ||||| || Sbjct 5260 CTCAATGGTATCGGAACCTTCAACCTCAAGGGTGATGGTTTTTCCTGTGAGCGTCTTCAC 5319 Query 34966 AAAGATCTGCATG 34978 |||||||||||| Sbjct 5320 GAAGATCTGCATG 5332 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| |||||||||||||| || ||||| ||| |||| |||| Sbjct 5348 AGGACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCT 5407 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||||||||||||||||| ||| ||||| ||| | || | || ||||| || Sbjct 5408 TCCAACTGCTTTCCGGCGAAGATCAATCGCTGCTGATCTGGGGGAATTCCTTCCTTATCT 5467 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || | || || |||| ||| ||||| Sbjct 5468 TGGATCTTGGCCTTCACGTTCTCGATGGTATCCGAACCTTCAACCTCAAGGGTGATGGTT 5527 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| ||||| || || || |||||||||||| Sbjct 5528 TTTCCGGTGAGCGTTTTGACGAAGATCTGCATG 5560 Score = 114 bits (126), Expect = 8e-21 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| |||||||| || |||| |||| ||||| |||||||||||||| Sbjct 9267 CTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 9326 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || || ||||||||| | || | || |||||||| | || || ||||| Sbjct 9327 AATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 9386 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || | || || || | ||| ||||||||||| ||||||||||| || Sbjct 9387 TTCAATAGTGTCGGAACCTTCAACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTCAC 9446 Query 34966 AAA 34968 || Sbjct 9447 GAA 9449 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 |||||||| || | || ||||||||| ||||| ||||| || || |||| |||| Sbjct 6247 AGGACCAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCATCC 6306 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||||||||||||||| || || ||||||||| | || | || |||||||| Sbjct 6307 TCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTC 6365 >seq311 Length=48857 Score = 91.5 bits (100), Expect = 1e-13 Identities = 132/186 (71%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 34796 ATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGT 34855 ||||| ||||| ||| | || | || || || ||||||||||||||||||| || Sbjct 16787 ATGTTGTAGTCGTTGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAGCGC 16728 Query 34856 TGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT 34915 ||||| ||| | || | |||||||| || | || || || ||| | ||||| Sbjct 16727 TGCTGATCTGGAGGAATGCCCTCCTTATCCTGGATCTTGGCCTTCACGT----TCTCGAT 16672 Query 34916 ----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGAT 34971 ||| || ||||| || | ||| |||||||| || ||||||||||| || ||||| Sbjct 16671 GCTGTCAGAAGCTTCGACTTCGAGGGTAATGGTCTTCCCGGTGAGGGTCTTCACGAAGAT 16612 Query 34972 CTGCAT 34977 |||||| Sbjct 16611 CTGCAT 16606 >seq3195 Length=29224 Score = 82.4 bits (90), Expect = 5e-11 Identities = 107/146 (73%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 34834 CTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTT 34893 ||| |||||||||||||| || ||||||||| | || | || |||||||| | || || Sbjct 25025 CTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 25084 Query 34894 TTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 |||||| || || || | || |||||||| || | ||| || ||||| ||| Sbjct 25085 GGCTTTGAC--ATTCTCGATAGTGTCCGAAGCCTCGACCTCGAGGGTAATTGTCTTACCC 25142 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| || || || |||||||| Sbjct 25143 GTTAGGGTTTTGACGAAAATCTGCAT 25168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325669642631246