Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_022749.1
Length=39758
Score E
Sequences producing significant alignments: (Bits) Value
seq1811 179 9e-41
>seq1811
Length=36858
Score = 179 bits (198), Expect = 9e-41
Identities = 564/855 (66%), Gaps = 28/855 (3%)
Strand=Plus/Plus
Query 8410 CCGGCGCGGTGGCTGCAATGGCGGATGAGCCGTTTGATTATATCGGCCTGCCGTTCAACG 8469
||| |||| |||| || ||| ||||| |||||||| | ||| | | ||| | | ||
Sbjct 22781 CCGCCGCGCTGGCGGCGTTGGGTGATGAACCGTTTGAATTCATCTGTCAGCCCTGGAGCG 22840
Query 8470 ACACGGCCTCCGTTAACACGCTGGTGACCGA-GATGAACGATACCAGCGGTCGCTGGAGC 8528
| |||||| | | || | |||| | ||| |||| ||||||| ||| |||||| |
Sbjct 22841 ATACGGCCACGCTCGACGC-CTGGAAAGCGACGATGGACGATACGGCCGGGCGCTGGTCC 22899
Query 8529 TATGCGCGTCAGCTGTATGGTCATGTGTATACGGCAAAGATCGGCA-CGCTGTCAGAACT 8587
| || ||||| ||||| ||||| || | || ||| ||| | || | | || ||
Sbjct 22900 TGGGCCAAGCAGCTCTATGGCCATGTTTACAGCGCCAAGCGCGGTAGCGTCGGC-GAGCT 22958
Query 8588 GGTGACCGCAGGT--GACCAGTTTAACCAGCAGCACATTACCCTGGCGGGGTACGAAAAA 8645
|||| |||| || | || | ||| | |||||||| || || || | ||||
Sbjct 22959 GGTGGCCGCCGGCCGGGCCCGC--AACGACCAGCACATGACTTTGCACGGCTTCGAACGC 23016
Query 8646 GACA---CCCAGACGCCTGCCGATGAGCTGGCGGCAAGCCGTACCGCCCGCGCA--GCGG 8700
| ||||| || || | || |||| || || |||| |||| | ||||
Sbjct 23017 GGGTTGCCCCAGCCGG-TGTGG--GAAGTGGCCGC--GCAGTACGCGGCGCGAACGGCGG 23071
Query 8701 TGTTTATTCGCAACGATCCGGCACGTCCCACGCAGACCGGTGAGCTGGTGGGTATGCTGC 8760
|||| || | ||| || | || || ||||||||||| ||| ||| || |
Sbjct 23072 TGTTCATCAGTGCCGACCCCGGCCGGCCAACGCAGACCGGCACCCTGTCGGGCATTGATC 23131
Query 8761 CTGCGCCGAAGGGGAAACGGTTCACGATGACCGAACAACAGACCCTGCTGTCTCATGGCG 8820
| || ||| | | || || || ||||||| | || | |||||| | |||
Sbjct 23132 CGGCCCCGGCCAGCGACCGCTTTACACTGACCGAGCGTCAATCGCTGCTGAGCTACGGCA 23191
Query 8821 TGGCAACGGCGTATGTCGAAAGCGGG--GTACTGCGCATTCAGCGTGATGTCACCACGTA 8878
| || || ||||| ||| |||| |||| ||||||||||| | || || |||||
Sbjct 23192 TTGCTACCGCGTACTACGAGGGCGGTTCGTAC--CGCATTCAGCGCGCCGTGACGACGTA 23249
Query 8879 CAGGAAAAACGCTTACGGGGTTGCGGATAACAGCTACCTCGACAGCGAGACGCTGCATAC 8938
| | ||||| ||||| || |||| ||| || ||||||||| |||||| ||
Sbjct 23250 CCAGCGCAACGCATACGGCCAGGCCGATACGTCCTATCTGGACAGCGAGCCGCTGC--AC 23307
Query 8939 CAG--CGCGTATGTACTGCGCAAACTG-AAATCCGTCATTACCAGTAAGTACGGGCGTCA 8995
||| ||| | || | ||||| ||| || |||| |||||||| || ||||| |||||
Sbjct 23308 CAGTCGGCGCACGTGATTCGCAACCTGCAAGGCCGT-ATTACCAGCAAATACGGCCGTCA 23366
Query 8996 CAAGCTTGCCAGTGACGGTACCCGCTTTGGTCCCGGTCAGGCGATTGTCACCCCGGCGGT 9055
|||||| |||| || || ||| ||| || |||||||| || || || ||| |||
Sbjct 23367 CAAGCTGGCCAACGATGGCACCGCCTTCGGCGATGGTCAGGCCATCGTGACGCCGTTGGT 23426
Query 9056 GATCAAAGGGGAACTGCTGGCAACCTACCGTCAGCTTGAGCGAGCGGGGATCGTGGAAAA 9115
|||| || || ||| |||| ||||| | |||| ||||| || || | || || ||
Sbjct 23427 GATCCGTGGCGAGCTGGTGGCGGCCTACGGCGAGCTGGAGCGCGCCGGCCTGGTCGAGAA 23486
Query 9116 CTACGAACTGTTTAAGCAGTACCTGGTTTTGGAGCGTGATGCCAGCGATCCGAACCGCCT 9175
| || ||||| ||||| ||||| | | ||||| || || | || |||||||| |
Sbjct 23487 CATGGAGCTGTTCAAGCAACACCTGATCGTTGAGCGCGACGCGAAAGACCCGAACCGAAT 23546
Query 9176 GAACACGCTGTTCCCGCCTGACTATGTTAACCAGTTGCGTGTCTTTGCCGTGGTTAACCA 9235
|||||||||||| || || |||||| |||| ||| | ||| || | ||
Sbjct 23547 CGCGGTGCTGTTCCCGCCGGATCTGGTCAACCAGCTGCGCGTCCTGGCCCTGTCGTATCA 23606
Query 9236 GCTCCGTCTTCAGTA 9250
| |||| || |||||
Sbjct 23607 GTTCCGGCTGCAGTA 23621
Score = 140 bits (154), Expect = 8e-29
Identities = 306/459 (67%), Gaps = 17/459 (4%)
Strand=Plus/Plus
Query 10318 CTTCCCATGTCTGCAGACGGGATCGCGGAAATTGTGGCGGCTGGCGGTCAGGCCGGGATT 10377
|| || ||| | || ||||||||||| |||| || ||||||||||||||| | || |||
Sbjct 24778 CTGCCGATGGCGGCGGACGGGATCGCTAAAATCGTTGCGGCTGGCGGTCAGTCGGGCATT 24837
Query 10378 GC---------------ACGTGATGAACTGATGCAGTTTGCCACTGATGCGGTGAAGATG 10422
|| ||| || || || | ||||| ||| || ||||| || |||
Sbjct 24838 GCCCGGAAAGGTTTCGAACGGGAAGACCTCAACCAGTTCGCCGAGGACGCGGTAAAAATG 24897
Query 10423 GGCGTGGCCTTTGATACCACGGCTGAAGAGTCCGGGCAGATGATGGCCCAGTGGCGTACT 10482
|||||||| || || ||||| ||| |||||||| | |||||||| ||||||| ||
Sbjct 24898 GGCGTGGCTTTCGACCAGACGGCCGAACAGTCCGGGGAAATGATGGCGAAGTGGCGCACC 24957
Query 10483 GCGTTTAATATGACGCAGGATGAAGTGGCCGGGCTGGCTGACAAAATCAACTACCTTGGT 10542
|||||| | |||| || ||||||| ||||| ||||| |||||||| || |
Sbjct 24958 GCGTTTCACATGAGCCAAACCGAAGTGGTGACCCTGGCCGACAAGATCAACTATCTAGCG 25017
Query 10543 AATACCGGCCCAGCGAACGCGAAGAAAATCTCCGATATTGTTACGCGTATTGGTCCTTTA 10602
|| | |||| | || | | | ||||||| | || || || || || || ||
Sbjct 25018 AACAACGGCGCGGCCAGTACCGCGCAAATCTCGGCCATCGTGACAGCCATCGGCCCGTTG 25077
Query 10603 GGTGGTGTTGCAGGTGTGGCTTCCGGCGAAATCGCGGCAATGGGGGCAACCATTGCCGGG 10662
|| | || || || || | || | ||||||| |||||| | | | ||||||
Sbjct 25078 GGCGAGGTGGCCGGGGTCAACGCTGGGCAGCTCGCGGCGATGGGGTCGGCTCTGGCCGGG 25137
Query 10663 ATGGGCGTGGAGTCA-GAAATTGCCGCCACAGGGGTCAAGAACTTCATGCTTTCCCTGAC 10721
|||| | | | || || | || ||||| || |||| ||||| ||||| | ||||
Sbjct 25138 GTGGGAATCG-GCCAGGAGGTGGCAGCCACCGGCATCAAAAACTTTATGCTGACGCTGAG 25196
Query 10722 CGCGGGAAATTCTGCGACAAAATCGCAGAAACAGGCATT 10760
||| || | | || || || ||||||||| | || ||
Sbjct 25197 CGCCGGCACGGCGGCTACTAAGTCGCAGAAAGAAGCGTT 25235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127095194393760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |