Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_023588.1 Length=33525 Score E Sequences producing significant alignments: (Bits) Value seq1811 185 2e-42 >seq1811 Length=36858 Score = 185 bits (204), Expect = 2e-42 Identities = 374/553 (68%), Gaps = 29/553 (5%) Strand=Plus/Plus Query 18863 GGCCATGGAGTTCGAATCCGCCATGGCCGACGTCAAGAAGGTGGTCGACTTCGACACGCC 18922 ||| || |||| ||| ||||||||| ||||| |||||||| || |||||||| ||||| Sbjct 24669 GGCAATCAAGTTTGAAAGCGCCATGGCGGACGTAAAGAAGGTCGTTGACTTCGAGACGCC 24728 Query 18923 CGATGGCTTCGAGAAGATGGGCGACGATATTCAGGAGCTGTCGCGGCGCCTGCCCATGGT 18982 || ||| || |||||| || ||| ||| | | ||||| |||||||| |||| Sbjct 24729 CGCGCAGTTCAAGGCGATGGGGGAGGATGTTCTGAACCTGTCCGAACGCCTGCCGATGGC 24788 Query 18983 GCCCACCGACATTGCCAAGATCGTTGCTGCCGCTGGCCAAGCTGGCATCGCCAGCACTG- 19041 | | || || || || |||||||| || | || || | ||||| ||| | | | Sbjct 24789 GGCGGACGGGATCGCTAAAATCGTTGCGGCTGGCGGTCAGTCGGGCATTGCCCGGAAAGG 24848 Query 19042 --------------AGCTGACTCGCTTCGCCGAGGACGCGGCGAAGATGGGCGTAGCCTT 19087 | || | | |||||||||||||||| || |||||||| || || Sbjct 24849 TTTCGAACGGGAAGACCTCAACCAGTTCGCCGAGGACGCGGTAAAAATGGGCGTGGCTTT 24908 Query 19088 CGACACCACCGCCGAAGACGCCGGCCAGACGATGGCCACCTGGCGCACCGCCTTCCGCAT 19147 |||| || |||||| | |||| | | |||||| | ||||||||||| || | ||| Sbjct 24909 CGACCAGACGGCCGAACAGTCCGGGGAAATGATGGCGAAGTGGCGCACCGCGTTTCACAT 24968 Query 19148 GGGCCAGGATGACGTGGTCGTGCTGGCCGACAAGATCAACTACCTGGGCAACACCGGCCC 19207 | |||| || ||||| |||||||||||||||||||| || | |||| |||| | Sbjct 24969 GAGCCAAACCGAAGTGGTGACCCTGGCCGACAAGATCAACTATCTAGCGAACAACGGCGC 25028 Query 19208 GGC---TAGCGTCCAGAAGATCAGCGAGGTGGTGAACCGGATCGGCGCGCTCGGCGAGGT 19264 ||| || || || || || || | | |||| |||||| || | |||||||| Sbjct 25029 GGCCAGTACCGCGCA-AATCTCGGCCA--TCGTGACAGCCATCGGCCCGTTGGGCGAGGT 25085 Query 19265 CGCCGGCCTTGGT-AGC---GGCCCGCTGGCGGCGCTTGGCGCCACGGTGGCCGGTATGG 19320 ||||| ||| | | || | ||| |||||| | || | | ||||||| ||| Sbjct 25086 GGCCGG----GGTCAACGCTGGGCAGCTCGCGGCGATGGGGTCGGCTCTGGCCGGGGTGG 25141 Query 19321 GCATCGAGTCGGAAGTGTCTGCCACGGGCATCAAGAACATGCTGCTCACCCTGTCCTCGG 19380 | |||| ||| ||| | ||||| |||||||| ||| | |||| || ||| | | | Sbjct 25142 GAATCGGCCAGGAGGTGGCAGCCACCGGCATCAAAAACTTTATGCTGACGCTGAGCGCCG 25201 Query 19381 GCGAGGCGGCAAC 19393 || |||||| || Sbjct 25202 GCACGGCGGCTAC 25214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107150976199996