Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq5140 98.7 1e-15 >seq5140 Length=7192 Score = 98.7 bits (108), Expect = 1e-15 Identities = 174/250 (70%), Gaps = 9/250 (4%) Strand=Plus/Plus Query 99860 CCAAAACCACCTGCGCCGCGTTCAGTTTCCGTACTGAACTCATCCACCTGTTTGAACAGA 99919 |||||||| ||||||||||||| ||||| | ||||| | ||| ||| ||| | Sbjct 2689 CCAAAACCGCCTGCGCCGCGTTGGGTTTC---ATCAAACTCTTGTACCAGTTCGAAGTGC 2745 Query 99920 CCCATCACCACCGGTTGAATCAGGTATTGCGCAATACGGTCGCCACGAGAGATTTTAAAC 99979 || ||||||||| | | | || ||||| || ||||| || ||| || ||| Sbjct 2746 GCCTGCACCACCGGCACCAGTACCAACTGGGCAATGCGTTCGCCGACAGCGATGTTGAAC 2805 Query 99980 GCAGGTCCCTGAGTGTTACGGTTCCACAGTGAAACCATCAGCTGCCCGTTGTAGTCTGCA 100039 || ||| ||| | ||||||||| ||| |||||||| | || | |||||| | | Sbjct 2806 GC-GGT--CTG---GCCACGGTTCCAGCATGACACCATCAGTTCGCCCTGGTAGTCCGAA 2859 Query 100040 TCAATGACGCCCGTCAGGTTACCCAGTACGATACCGTGTTTGTGACCCAGACCGGAGCGA 100099 || || | ||| |||||| |||| ||||| |||||||| || ||||| || ||||| Sbjct 2860 TCGATCAGGCCGACCAGGTTGCCCAACACGATGCCGTGTTTATGGCCCAGGCCAGAGCGC 2919 Query 100100 GGGTGAATCA 100109 || | |||| Sbjct 2920 GGCAGGATCA 2929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698505857745360