Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_024365.1 Length=51090 Score E Sequences producing significant alignments: (Bits) Value seq1811 170 6e-38 >seq1811 Length=36858 Score = 170 bits (188), Expect = 6e-38 Identities = 359/526 (68%), Gaps = 32/526 (6%) Strand=Plus/Plus Query 12960 ATCACCGCGCAGCAACTACTGCAGATCCTCCCGAACGCCGGCCAGAGAGCCGGCGTTTTT 13019 ||||| | |||||| | |||||||||||||| |||||| ||| ||| ||||||||| Sbjct 34129 ATCACAGAGCAGCAGTTGCTGCAGATCCTCCCCAACGCCCGCCGCCAAGCGGGCGTTTTT 34188 Query 13020 GCACCCGTTCTCAATACGGCGATGAGCAAGTACCAGATCGTGACACCGCTGCGCATCGCG 13079 | || | || || || | |||||||| ||| |||| | || | |||| || ||| Sbjct 34189 GTTCCTGCCCTAAACGCGACCATGAGCAAATACGCGATCATCACTCGCTTGCGGATTGCG 34248 Query 13080 GCATTCATTGCCCAGGTCGGTCATGAATCCGGCCAACTGCGCTACGTGCGTGAGATATGG 13139 || ||||| || ||| |||| || || || ||||| |||| |||||||| ||| | ||| Sbjct 34249 GCGTTCATCGCGCAGATCGGCCACGAGTCTGGCCAGCTGCAGTACGTGCGCGAGCT-TGG 34307 Query 13140 GGGCCGACCCCGCAGCAGTTGGG---GTACG--AGGGGC------GCAAAG-ACCTGGGC 13187 | |||| ||| | || | ||||| | ||| || ||| ||||||| Sbjct 34308 TAG-CGAC----CAGTACCTGAGCAAGTACGACACCGGCACCCTGGCCAAGCGCCTGGGC 34362 Query 13188 AATACC------GTGCCGGGCGATGGCTCCAAATACCGTGGGCGCGGCCTGATCCAGATC 13241 |||||| | | ||||| || || ||||| || | || ||||| ||| || Sbjct 34363 AATACCCCCGAAGCGGATGGCGACGGTCAGAAGTACCGGGGCAGGGGGCTGATTCAGGTC 34422 Query 13242 ACCGGACGGGCAAACTATGCTGAGTGCGGCGAAGCGCTG----GGCCTG--GGCCTGATC 13295 || || ||||| ||||||| | || ||||||||||| | || | ||| || Sbjct 34423 ACGGGCCGGGCGAACTATGAAGCCTGTAGCGAAGCGCTGTTCAGCGATGCTCGACTGCTC 34482 Query 13296 GACCACCCCGAATTGCTCGAGCTACCGCAGCACGCCGCGATGTCGGCAGCGTGGTTCTGG 13355 || ||| || |||| || ||| | |||||| ||||||| | ||||||||| Sbjct 34483 AACACCCCGGAGCTGCTGGAAAACCCGGTCTATGCCGCGTTGTCGGCGGGTTGGTTCTGG 34542 Query 13356 -GGCAAGAGTGGGCTCAATACGCTGGCAGACAAAAGCGAGTTCGTGACCATCACCCGGCG 13414 || | | || || || || ||||| ||||| |||| ||| | || |||||| ||| Sbjct 34543 CAGCGTGCG-GGCCTGAACACCCTGGCCGACAAGGGCGACTTCCTCACGATCACCAAGCG 34601 Query 13415 CATCAACGGCGGCACGAATGGCTTGGCTGATCGGCAGGCGCTTTAT 13460 |||||||||||| | || ||| |||| || || ||||||| ||| Sbjct 34602 CATCAACGGCGGAATCAACGGCCTGGCGGACCGTGAGGCGCTGTAT 34647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163355082180016