Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq5716 98.7 2e-15
>seq5716
Length=132174
Score = 98.7 bits (108), Expect = 2e-15
Identities = 159/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATT-CTTAGAACTTCGTAA 110815
||||| || || |||||||||||||| ||||||| || || || || ||| || ||
Sbjct 121602 TTTGCGATTTACGTCGAACCTTGGCATGCAGATATCTTCGAGTTTCTGAGA-CTGAAGAA 121660
Query 110816 AAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGA 110875
||| || | |||||| || | || || ||| | ||||| || |||||||| | ||
Sbjct 121661 GAATACCGGCTCAGAAGAAGAACGTGCTCGAGATCTTTTTTACGCTTTGTGGATTCCTGA 121720
Query 110876 TTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTC 110935
||| || ||| |||| || | ||| | ||||||||||||||| ||||| |
Sbjct 121721 TTTGTTTATGGAACGAGTAAAGGAAGACAAAGAGTGGTCTCTTATGTGCCCTCACAAGTG 121780
Query 110936 TCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTAC 110981
|| ||||| ||||| |||||| | ||||| ||| | || |||
Sbjct 121781 CCCAGGTCTCCCTGATTGTTATGGAGAGGAGTTCGAAAAACTCTAC 121826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186724087968474
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |