Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq616 132 1e-25
seq611 129 1e-24
seq4364 105 2e-17
seq5007 102 2e-16
seq871 98.7 2e-15
>seq616
Length=1528
Score = 132 bits (146), Expect = 1e-25
Identities = 155/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| |||||||| ||||| ||||| ||| | ||||| ||| | ||||||
Sbjct 1324 CAGATCTTCGTCAAGACGCTCACCGGAAAGACGATTACTCTTGAAGTTGAAGGCTCTGAC 1265
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| |||| || ||||| || ||| ||||| || ||||||||| || ||| ||
Sbjct 1264 ACCATCGAGAATGTCAAAGCCAA-GATCCAAGACAAGGAAGGAATTCCTCCAGACCAGCA 1206
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|| | |||||||||||||||||| | || ||||| | |||||| |||| |||||| |
Sbjct 1205 GCGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACTTTGTCCGACTACAACAT 1146
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || || || ||
Sbjct 1145 TCAGAAGGAGTCAACCCTCCATCTCGT 1119
Score = 120 bits (132), Expect = 7e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||||||||| || || |||||||| |||||||||||| | || |||
Sbjct 590 CAGATCTTCGTCAAAACGCTCACCGGCAAGACGATCACCTTGGAAGTGGAAGGCTCGGAC 531
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| || |||||||| || ||| ||
Sbjct 530 ACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAGCAG 471
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || || ||||||||||||||| | || ||||| | || | | || |||||| ||
Sbjct 470 CGCCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTTTCGGACTACAACATC 411
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
|||||||| || || || || || ||
Sbjct 410 CAGAAAGAATCCACCCTCCATCTCGT 385
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || || || |||||| ||||||||||| | || |||
Sbjct 1096 CAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAAGTGGAAGGCTCCGAC 1037
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || |||||||||||| || ||| ||
Sbjct 1036 ACGATTGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGAATTCCCCCAGACCAGCAG 977
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | |||||||||||||||||| |||||||||| | || | |||| ||||| ||
Sbjct 976 CGATTGATCTTCGCCGGAAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAATATC 917
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || || || || ||||| ||
Sbjct 916 CAGAAGGAATCGACCCTCCACCTCGT 891
Score = 105 bits (116), Expect = 2e-17
Identities = 142/195 (73%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || ||||| || |||| || || | ||||| || |||||
Sbjct 350 AAGACCCTCACTGGCAAGACGATTACCCTGGAGGTCGAGGGCTCTGATACCATCGAAAAT 291
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| || ||| || || |||||||||||| || ||| || | || || ||
Sbjct 290 GTCAAAGCCAA-GATCCAGGACAAAGAAGGAATTCCCCCAGACCAGCAGCGCCTCATTTT 232
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||||||||||| | || ||||| | |||||| |||| |||||| ||||||| || ||
Sbjct 231 CGCCGGAAAGCAGCTCGAGGATGGTCGCACTTTGTCCGACTACAACATCCAGAAGGAATC 172
Query 206364 TACTCTTCACCTTGT 206378
|| || || || ||
Sbjct 171 GACCCTCCATCTCGT 157
>seq611
Length=17302
Score = 129 bits (142), Expect = 1e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||||||||| ||||| ||||||||| | || || ||| | ||||||
Sbjct 6177 CAGATCTTCGTCAAAACGCTCACCGGAAAGACGATCACTCTTGAGGTCGAAGGCTCTGAC 6118
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| || || ||||| || ||||||||| || ||| ||
Sbjct 6117 ACGATTGAGAACGTGAAGGCCAAAATCCAAGATAAGGAAGGAATTCCCCCAGACCAGCAG 6058
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || || |||||||| |||||| | || ||||| | |||||| |||| |||||| ||
Sbjct 6057 CGCCTGATTTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACTTTGTCCGACTACAACATC 5998
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
|||||||| || || || ||||| ||
Sbjct 5997 CAGAAAGAATCCACCCTCCACCTGGT 5972
Score = 125 bits (138), Expect = 2e-23
Identities = 141/189 (75%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| ||||||||||||||||| ||||| | || || ||| |||| || || | ||
Sbjct 5316 AAGACGCTCACAGGAAAAACCATCACCCTTGAGGTTGAAGGTTCCGATACCATTGAGAAC 5257
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || || || || || ||||||||| || ||| || | || ||||||
Sbjct 5256 GTGAAGGCCAAAATCCAGGACAAGGAAGGAATTCCCCCAGACCAGCAGCGCCTCATCTTC 5197
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||| ||| |||||||||| | |||||| |||| |||||| ||||||| |||||
Sbjct 5196 GCCGGAAAACAGCTGGAAGATGGCCGCACTTTGTCCGACTACAACATCCAGAAGGAGTCG 5137
Query 206365 ACTCTTCAC 206373
||||| |||
Sbjct 5136 ACTCTCCAC 5128
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||||||||| |||||||| ||||| | || || ||| |||| ||
Sbjct 5556 CAGATCTTCGTCAAAACGCTCACCGGAAAAACCATCACCCTTGAGGTTGAAGGTTCGGAT 5497
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| || ||||||||| || || ||
Sbjct 5496 ACCATCGAGAACGTGAAGGCCAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCAGCAG 5437
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||||||||||||||||||||||||||| | || | | ||||||||| |
Sbjct 5436 CGATTGATCTTCGCCGGAAAGCAGTTGGAAGATGGCCGCACCCTCTCGGATTACAACATT 5377
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || || ||||| || || ||
Sbjct 5376 CAGAAGGAATCCACTCTCCATCTCGT 5351
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| ||||| || ||||| | || || ||| |||| ||||| | |||
Sbjct 9443 AAGACCCTCACTGGAAAGACCATCACCCTCGAGGTTGAAGGTTCCGACACTATTGAAAAT 9384
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || ||||||||| || ||| || | || || |||
Sbjct 9383 GTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAGCAGCGCCTCATTTTC 9324
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| |||||||||| | ||| | | || |||||| | ||||| |||||
Sbjct 9323 GCCGGAAAGCAGCTGGAAGATGGCCGCACTCTCTCGGACTACAACATTCAGAAGGAGTCG 9264
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| || || ||| | | |||||
Sbjct 9263 ACTCTCCATCTCGTTCTTCGTCTTCG 9238
Score = 107 bits (118), Expect = 5e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| |||||||| || || || || || ||||||| ||| | || ||||| ||||
Sbjct 4603 AAGACGCTCACTGGCAAGACCATTACCCTGGAAGTCGAAGGATCGGACACTATCGAGAAC 4544
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| || ||||||||| || ||| || | || ||||||
Sbjct 4543 GTGAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAACAGCGCCTCATCTTC 4484
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | || ||||| | || || | || |||||| ||||||| || ||
Sbjct 4483 GCCGGAAAGCAGCTCGAGGATGGTCGCACCCTGTCGGACTACAACATCCAGAAGGAATCA 4424
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 4423 ACGCTCCACCTCGT 4410
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| ||||| || || || ||||| | || || || ||| ||||| ||||
Sbjct 9848 AAAACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGGCTTCGGACACCATCGAGAAT 9789
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || ||||||||| || || || | || ||||||
Sbjct 9788 GTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAGCAGCGCCTCATCTTC 9729
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | || ||||| | || | | || |||||| ||||||| |||||
Sbjct 9728 GCCGGAAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCG 9669
Query 206365 ACTCTTCACCTTGT 206378
||||| || || ||
Sbjct 9668 ACTCTCCATCTCGT 9655
Score = 86.0 bits (94), Expect = 1e-11
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 204769 GTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 204828
||| ||||| ||||| ||||||| || ||||| | |||||| | ||||||||||||||
Sbjct 5128 GTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCATCTTCCAGCTG 5187
Query 204829 CTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||||||||| || || || ||
Sbjct 5188 TTTTCCGGCGAAGATGAGGCGCTGCTG 5214
>seq4364
Length=177085
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || |||||||| ||||||| || |||| ||||| | ||
Sbjct 157131 AAGACCCTCACTGGCAAGACGATCACCCTGGAAGTCGAGGGTTCGGACACCATTGAGAAC 157072
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| |||||||| ||| || || || | | ||||||
Sbjct 157071 GTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCAGATCAGCAGCGTTTGATCTTC 157012
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | ||||| || | ||| | ||||||||||| ||||||| || ||
Sbjct 157011 GCCGGAAAGCAGCTCGAAGACGGTCGCACTCTCTCCGATTACAACATCCAGAAGGAATCG 156952
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| || || || || | |||||||
Sbjct 156951 ACCCTCCATCTCGTACTCCGACTTCG 156926
>seq5007
Length=89527
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| |||||||| || |||||||| | || || ||| | || ||
Sbjct 22483 CAGATCTTTGTGAAAACCCTCACAGGGAAGACGATCACGCTCGAGGTCGAAGGCTCCGAT 22424
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| || ||||| || || ||| ||
Sbjct 22423 ACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAGCAG 22364
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||||||||| | || || ||| | || | |||| |||||| ||
Sbjct 22363 CGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGCACGCTCTCCGACTACAACATC 22304
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||||||||| || || || || ||
Sbjct 22303 CAGAAAGAGTCGACCCTCCATCTCGT 22278
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| |||||||| || |||||||| | || || || | || ||
Sbjct 22255 CAGATCTTTGTGAAAACCCTCACAGGGAAGACGATCACGCTCGAGGTTGAGGGCTCCGAT 22196
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| || ||||| || || ||| ||
Sbjct 22195 ACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAGCAG 22136
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||||||||| | || || ||| | || | |||| |||||| |
Sbjct 22135 CGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGCACGCTCTCCGACTACAACATT 22076
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||||||||| || || || || ||
Sbjct 22075 CAGAAAGAGTCGACCCTCCATCTCGT 22050
>seq871
Length=2590
Score = 98.7 bits (108), Expect = 2e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || |||||||| ||||||||||| ||||||||| ||||
Sbjct 514 AAGACCCTCACCGGGAAGACGATCACCCTGGAAGTGGAAGGTTCTGACAGCATCGAGAAC 573
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||| || || |||||||| ||| || || || | | ||||||
Sbjct 574 GTAAAGGCGAAGATCCAGGACAAAGAAGGTATTCCCCCTGATCAGCAGCGTTTGATCTTC 633
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | ||||| || | || | ||| |||||| |||| || || ||
Sbjct 634 GCCGGAAAGCAGCTCGAAGACGGCCGAACCCTCAACGACTACAACATCCAAAAGGAATCG 693
Query 206365 ACTCTTCACCTTGT 206378
||| | || || ||
Sbjct 694 ACTTTGCATCTCGT 707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181732461111114
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