Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq328 190 3e-42 seq4415 174 2e-37 seq3781 156 6e-32 seq2312 145 1e-28 seq3808 132 7e-25 seq3537 129 8e-24 >seq328 Length=891 Score = 190 bits (210), Expect = 3e-42 Identities = 191/247 (77%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 || |||||| || ||||| ||||||||||||||||||||| || ||| Sbjct 269 TCCTACTCGGTCTACGTCTACCGCGTGCTCAAGCAGGTGCACCCCGACAC---TGGAATC 213 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || || || | |||||||||||||||||||||| ||||||||| | |||| |||||| Sbjct 212 TCGTCGAA---GGCCATGTCGATCATGAACTCGTTCGTCAACGACGTCTTCGAGCGCATC 156 Query 725016 GGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075 | || ||||||| | || || |||| || |||||||||| || ||| | | ||||| Sbjct 155 GCCAACGAGGCCAGCCGTCTCGCGCACTACAACAAGCGCTCGACCATCTCCTCTCGCGAA 96 Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAG 725135 ||||||||| |||| || || ||| ||| ||||||||||||| |||||||||||||||| Sbjct 95 ATCCAGACCTCCGTCCGACTCATCCTGCCTGGCGAACTGGCCAAGCACGCCGTCTCCGAG 36 Query 725136 GGCACCA 725142 || |||| Sbjct 35 GGAACCA 29 >seq4415 Length=18448 Score = 174 bits (192), Expect = 2e-37 Identities = 173/223 (78%), Gaps = 6/223 (3%) Strand=Plus/Minus Query 724920 GTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTCGATC 724979 ||||||||||||||||||||| |||| ||| ||| |||| | ||||| ||| Sbjct 6662 GTGCTCAAGCAGGTGCACCCCGACACCGGA-----ATC-TCCTCCAAGGCGATGTCCATC 6609 Query 724980 ATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCG 725039 ||||||||||| || |||||| | |||| ||||||| | ||| ||| ||||| || Sbjct 6608 ATGAACTCGTTCGTGAACGACGTCTTCGAGCGCATCGCCGGCGAAGCCTCGCGCCTCGCC 6549 Query 725040 CGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATC 725099 | || |||||||||| ||||||| | ||||| ||||||||| |||||||||| ||| Sbjct 6548 CACTACAACAAGCGCTCCACGATCTCGTCCCGCGAAATCCAGACCTCCGTGCGCCTCATC 6489 Query 725100 ATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | ||| || || |||| ||||||||||||||||||||||| Sbjct 6488 CTCCCCGGAGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 6446 >seq3781 Length=46925 Score = 156 bits (172), Expect = 6e-32 Identities = 169/223 (76%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 724920 GTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTCGATC 724979 || |||||||||||||||||| || ||| ||||| || | ||||||| ||| Sbjct 45105 GTTCTCAAGCAGGTGCACCCCGACAC---TGGAATCTCCTCGAA---GGCCATGTCCATC 45158 Query 724980 ATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCG 725039 ||||||||||| ||||| ||| | |||| ||||| | | || ||| ||||| || Sbjct 45159 ATGAACTCGTTCGTCAATGACGTCTTCGAACGCATTGCCCAGGAAGCCTCGCGCCTCGCC 45218 Query 725040 CGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATC 725099 | || |||||||||| ||| ||| | ||||| || ||||||||||| || || ||| Sbjct 45219 CACTACAACAAGCGCTCCACCATCTCATCCCGCGAAATTCAGACCGCCGTCCGTCTCATC 45278 Query 725100 ATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | ||| |||||||||| ||||||||||||||||||||||| Sbjct 45279 CTCCCCGGTGAACTGGCCAAGCACGCCGTCTCCGAGGGCACCA 45321 >seq2312 Length=17903 Score = 145 bits (160), Expect = 1e-28 Identities = 180/245 (73%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 || |||||| || |||||| ||| | |||||||||||||| |||| || Sbjct 2687 TCCTACTCGGTCTACATCTACCGCGTGATGAAGCAGGTGCACCCGGACACCGG-----CA 2633 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || || ||| | ||||| |||||||||||||| ||| |||| | |||| |||||| Sbjct 2632 TC-TCGTCGAAGGCAATGTCCATCATGAACTCGTTCGTCGGCGACGTCTTCGAGCGCATC 2574 Query 725016 GGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075 | || ||| || ||||| ||| | ||||||||| ||||||| | | |||||| Sbjct 2573 GCCAGCGAAGCGTCGCGCCTCACGCAGTATAACAAGCGCTCCACGATCTCCTCCCGCGAG 2514 Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAG 725135 ||||| ||||| |||||||| || ||| |||||| |||||| ||||| ||||||||| Sbjct 2513 ATCCAAACCGCGGTGCGCCTCATTCTGCCCGGCGAGTTGGCCAAACACGCGGTCTCCGAG 2454 Query 725136 GGCAC 725140 ||||| Sbjct 2453 GGCAC 2449 Score = 120 bits (132), Expect = 4e-21 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 724997 CGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAA 725056 |||| | |||| ||||||| || ||| || ||||| ||| | |||||||||| Sbjct 4759 CGACGTCTTCGAGCGCATCGCCAGCGAAGCGTCGCGCCTCACGCAGTACAACAAGCGCTC 4818 Query 725057 CACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGC 725116 ||||||| | | ||||||||||| |||||||||||||| || ||| |||||| |||| Sbjct 4819 CACGATCTCCTCCCGCGAGATCCAAACCGCCGTGCGCCTCATTCTGCCCGGCGAGTTGGC 4878 Query 725117 CAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||||| |||||||||||||||| Sbjct 4879 CAAACACGCGGTCTCCGAGGGCACCA 4904 >seq3808 Length=33171 Score = 132 bits (146), Expect = 7e-25 Identities = 164/223 (74%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 724920 GTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTCGATC 724979 ||||||||||||||||||||| |||| |||| || ||| | ||||| ||| Sbjct 18664 GTGCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCGAAGGCAATGTCCATC 18717 Query 724980 ATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCG 725039 ||||||||||| ||||||||| | | || ||||||| | ||| ||| || || || Sbjct 18718 ATGAACTCGTTCGTCAACGACGTCTTTGAGCGCATCGCCGGCGAAGCCTCGCGTCTCGCT 18777 Query 725040 CGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATC 725099 | || ||||||||| || || | ||||| ||||||||| |||| ||||| ||| Sbjct 18778 CACTACAACAAGCGATCGACCATTTCTTCCCGCGAAATCCAGACCTCCGTCCGCCTCATC 18837 Query 725100 ATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | ||||| || |||| ||||||||||||||||| |||| Sbjct 18838 CTCCCTGGCGAGCTCGCCAAACACGCCGTCTCCGAGGGAACCA 18880 >seq3537 Length=139359 Score = 129 bits (142), Expect = 8e-24 Identities = 146/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 2133558 GACGAGATGGTGACGGTGCGCGATATTGACTTTTTCTCCATGTGCGAGCACCACCTGCTG 2133617 |||||||||||| ||||||||| || || || ||||| | |||||||||||||| | Sbjct 74136 GACGAGATGGTGCTGGTGCGCGACATCGAGTTCTTCTCTCTCTGCGAGCACCACCTTGTC 74077 Query 2133618 CCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCCCGCGGGCAAGATCATCGGTCTGAGC 2133677 ||||| |||||||| | ||| | |||||||||||| |||||| |||| || ||| Sbjct 74076 CCCTTCATCGGCAAAGTGCACATCGGCTACCTGCCCAACAAGAAGATCCTCGGCCTCAGC 74017 Query 2133678 AAGATCCCGCGCATCGTCGACATGTTTTCCGAC--CGCTTCCAAGTACAGGAGGCACTCA 2133735 || || ||||||||||||| ||| ||| ||| || |||| || |||||| |||| Sbjct 74016 AAACTCGCGCGCATCGTCGAGATG--TTCGGACGTCGGCTCCAGGTGCAGGAGCGCCTCA 73959 Query 2133736 CGCGCCAGATCGCC 2133749 | || |||||| Sbjct 73958 CCAAGCAAATCGCC 73945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177248499977108