Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5716 145 9e-30 >seq5716 Length=132174 Score = 145 bits (160), Expect = 9e-30 Identities = 476/734 (65%), Gaps = 33/734 (4%) Strand=Plus/Plus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| ||| ||| | | || || | ||| || || || || ||||||||||||||||| Sbjct 121929 TGGGAAGAGATTGTTACTTCGCAGATCGAAACCGGAACTCCTTACATGCTTTACAAAGAT 121988 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 || || || | |||| ||| || ||||||||||| ||||||| | || ||||| || Sbjct 121989 GCATGCAATCGAAAGTCTAACCAGAAGAATTTGGGAACGATCAAGTGCTCAAATCTGTGC 122048 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 || ||||| || | | | | |||||| ||||| || || || || || || Sbjct 122049 ACCGAAATAGTGCAGTACTCGTCCCCAGATGAAGTCGCTGTTTGCAATCTGGCCTCCGTC 122108 Query 105068 GCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTGATTATGAAAAACTCCACGA 105126 ||| | || | |||| | || ||| ||||| || || |||||||| || ||||| Sbjct 122109 GCTTTGAACAGATTTGTGAA---GGATGAC-AAGACCTTCGACTATGAAAAGCTTCACGA 122164 Query 105127 AGTTACGAAAACTGTCACCAAA---AACCTAAACAGAGTTATTGATAGAAATTTTTACCC 105183 |||| || |||| || | || | |||| | | ||||| | || | || || Sbjct 122165 GATTACCAA---GGTCATCACACGCAATTTGAACAAAATAATTGACTGCAACTACTATCC 122221 Query 105184 CGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGG 105243 | | ||| | ||||| | | | || || ||||| || |||| |||||||| Sbjct 122222 TATACCGGAAGCTGAAACCTCTAACAAGCGTCATCGCCCAATAGGAATCGGAGTTCAGGG 122281 Query 105244 TCTCGCGGATGTATTCATTCTTTGTCGCCACGCATT--TGATTCCGACGAAGCGAAGGAA 105301 | | || |||| ||||| || |||||| | || | || | ||| || Sbjct 122282 TTTGGCTGATGCCTTCATGCTAATGCGCCACCCGTTCACCAGCCCTCAGGCTCGA--GAT 122339 Query 105302 ATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTG 105361 | || ||| || ||||| || || || |||| ||||| || ||| | || | Sbjct 122340 GTGAACAAGCGAATCTTTGAAACAATTTACTACGCAGCTCTGGAAGCGTCATGCGAACTT 122399 Query 105362 GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTT 105421 || ||| ||||||| || ||||||| |||||| ||||||| ||||| | || Sbjct 122400 GCTGAGAAATATGGTCCTTACGAAACCTATGAGGGGTCTCCAGTGAGCCAAGGAATTCTG 122459 Query 105422 CAATTTGATATGTGG------GAAG--GTGAGACCAAGCTTCACTAC----------GAC 105463 || | ||| |||||| |||| | | |||| | || |||| ||| Sbjct 122460 CAGTATGAAATGTGGCAAACAGAAGACGGCAAACCAGTCGTCCCTACAGATCAGTGTGAC 122519 Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 |||| | ||||||| || ||| | || | || | || |||||||| || | || Sbjct 122520 TGGGCATCTCTCAAAGAGAAAATCGCGAAGCACGGGGTACGCAACAGTCTGCTTCTTGCC 122579 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 || ||||| || || || ||||| |||||| | || || ||||||| | | || || ||| Sbjct 122580 CCGATGCCGACCGCATCAACCGCTCAAATCCTTGGAAACAATGAATCCATCGAGCCGTAC 122639 Query 105584 ACGACGAACATCTA 105597 ||| | ||||| || Sbjct 122640 ACGTCCAACATTTA 122653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583218265706160