Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq611 178 1e-39
seq5716 170 2e-37
seq616 170 2e-37
seq4364 145 9e-30
seq5007 141 1e-28
seq871 136 5e-27
seq2300 120 3e-22
seq3368 118 1e-21
seq311 118 1e-21
seq1821 116 4e-21
seq4684 105 8e-18
seq3387 102 9e-17
seq3195 96.9 4e-15
seq5329 82.4 9e-11
>seq611
Length=17302
Score = 178 bits (196), Expect = 1e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || || || || || |||||||| || || || ||||| ||| |
Sbjct 9864 AATGCAAATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGGCTTC 9805
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||| | ||| ||||||| || || ||||||||||| |||||||| ||||| ||
Sbjct 9804 GGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCA 9745
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| || || || || || ||||| |||||||||| || ||||| | ||||| ||
Sbjct 9744 GCAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAA 9685
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| ||||| ||| | ||||||||||| ||
Sbjct 9684 CATCCAGAAGGAGTCGACTCTCCATCTCGTCCTTCGTCTTCGCGGAGG 9637
Score = 163 bits (180), Expect = 3e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || |||||||| || |||||||| ||||| || || || || |
Sbjct 4618 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACCATTACCCTGGAAGTCGAAGGATCG 4559
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || ||||||| || || || |||||||| |||||||| ||||||||
Sbjct 4558 GACACTATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAA 4499
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||||| ||| ||||| | ||||| ||
Sbjct 4498 CAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTGTCGGACTACAAC 4439
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| |||||||| || || || || ||| | |||||||||||||||
Sbjct 4438 ATCCAGAAGGAATCAACGCTCCACCTCGTCCTTCGTCTTCGCGGTGGA 4391
Score = 163 bits (180), Expect = 3e-35
Identities = 173/227 (76%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 27409 CAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG---T 27465
|| ||||| ||||| ||||| ||||| ||||| || ||||||||||| || ||| |
Sbjct 6177 CAGATCTTCGTCAAAACGCTCACCGGAAAGACGATCACTCTTGAGGTCGA---AGGCTCT 6121
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || ||||||| ||||| || || ||||| |||||||| |||||||||
Sbjct 6120 GACACGATTGAGAACGTGAAGGCCAAAATCCAAGATAAGGAAGGAATTCCCCCAGACCAG 6061
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || ||||| || || ||||| |||||||||| ||| || | | ||||| ||
Sbjct 6060 CAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACTTTGTCCGACTACAAC 6001
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || |||||||| || || || ||| | || || ||||| ||
Sbjct 6000 ATCCAGAAAGAATCCACCCTCCACCTGGTCCTTCGGCTCCGCGGAGG 5954
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| | || |||||||| || || || ||||| || |
Sbjct 4846 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACGATCACACTCGAGGTCGAAGGATCG 4787
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||||| || || || |||||||| |||||||| |||||||||
Sbjct 4786 GACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 4727
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | ||||| ||||| ||||| || || |||| ||| ||||| | ||||| ||
Sbjct 4726 CAGCGATTGATTTTCGCTGGAAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAAC 4667
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| ||||| ||| | || || || |||||
Sbjct 4666 ATCCAGAAGGAGTCGACTCTCCATCTTGTCCTCCGACTCCGTGGTGG 4620
Score = 149 bits (164), Expect = 7e-31
Identities = 167/222 (75%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT---GATAGC 27471
|| || ||||| || || || ||||| || || || |||||||| |||| || |
Sbjct 9449 TTCGTGAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTTGA---AGGTTCCGACACT 9393
Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531
|||| |||| | ||||| || || ||||||||||| |||||||| ||||||||||||||
Sbjct 9392 ATTGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAGCAGCGC 9333
Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591
|| ||||| || || ||||| || || |||| || || || | ||||| || | ||
Sbjct 9332 CTCATTTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTCTCGGACTACAACATTCAG 9273
Query 27592 AAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
||||| || ||||| ||||| || | |||||||| ||||||
Sbjct 9272 AAGGAGTCGACTCTCCATCTCGTTCTTCGTCTTCGTGGTGGA 9231
Score = 145 bits (160), Expect = 9e-30
Identities = 171/230 (74%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| ||||| ||||| ||||| || || || || ||||||||||| ||||
Sbjct 5559 ATGCAGATCTTCGTCAAAACGCTCACCGGAAAAACCATCACCCTTGAGGTTGA---AGGT 5503
Query 27466 ---GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|||| ||| | || ||||||| || || || || ||||| |||||||| |||||
Sbjct 5502 TCGGATACCATCGAGAACGTGAAGGCCAAGATCCAAGATAAGGAAGGAATTCCCCCAGAT 5443
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||||| | || || || || ||||| | || |||| || ||||| | || ||
Sbjct 5442 CAGCAGCGATTGATCTTCGCCGGAAAGCAGTTGGAAGATGGCCGCACCCTCTCGGATTAC 5383
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | || |||||||||||||| ||||| ||| | ||||| || || ||
Sbjct 5382 AACATTCAGAAGGAATCCACTCTCCATCTCGTCCTTCGTCTCCGAGGAGG 5333
Score = 143 bits (158), Expect = 3e-29
Identities = 156/206 (76%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || |||||||| || || || || || || ||||||||||| ||||
Sbjct 5331 ATGCAGATCTTCGTGAAGACGCTCACAGGAAAAACCATCACCCTTGAGGTTGA---AGGT 5275
Query 27466 ---GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|||| ||||| || ||||||| ||||| ||||||||||| |||||||| ||||||
Sbjct 5274 TCCGATACCATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGAATTCCCCCAGAC 5215
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||||| || || || || || || || || || |||| || || | | |||||
Sbjct 5214 CAGCAGCGCCTCATCTTCGCCGGAAAACAGCTGGAAGATGGCCGCACTTTGTCCGACTAC 5155
Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608
|| |||| ||||| || ||||| ||
Sbjct 5154 AACATCCAGAAGGAGTCGACTCTCCA 5129
Score = 123 bits (136), Expect = 3e-23
Identities = 114/143 (80%), Gaps = 6/143 (4%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT---GATAGCATTGCAAATTTGAAG 27486
|| || || || || || ||||||||||| |||| |||| ||||| || ||||
Sbjct 5743 ACAGGAAAAACCATCACCCTTGAGGTTGA---AGGTTCCGATACCATTGAGAACGTGAAA 5687
Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546
|| || || ||||||||||| |||||||||||||| |||||||| || ||||| || ||
Sbjct 5686 GCCAAGATCCAGGACAAGGAAGGAATTCCTCCAGATCAGCAGCGCCTGATTTTCGCCGGA 5627
Query 27547 AAGCAACTCGAGGATGATCGTAC 27569
|||||||||||||||| ||||||
Sbjct 5626 AAGCAACTCGAGGATGGTCGTAC 5604
Score = 116 bits (128), Expect = 4e-21
Identities = 113/144 (78%), Gaps = 6/144 (4%)
Strand=Plus/Minus
Query 27409 CAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT--- 27465
|| ||||| ||||| ||||| ||||| ||||| || ||||||||||| || |||
Sbjct 5117 CAGATCTTCGTCAAAACGCTCACCGGAAAGACGATCACTCTTGAGGTCGA---AGGCTCC 5061
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || ||||||| || || |||||||||||||||||||| ||||| |||
Sbjct 5060 GACACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGATCAG 5001
Query 27526 CAGCGTCTAATTTTTGCTGGTAAG 27549
||||| || || ||||||||| ||
Sbjct 5000 CAGCGACTGATCTTTGCTGGTTAG 4977
Score = 116 bits (128), Expect = 4e-21
Identities = 105/132 (80%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552
|| ||||||||||| |||||||| |||||||||||||| || || || || || |||||
Sbjct 6371 ATCCAGGACAAGGAAGGAATTCCCCCAGACCAGCAGCGCCTCATCTTCGCCGGAAAGCAG 6312
Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTA 27612
|||||||||| || || || | ||||| || |||| ||||| || ||||| |||||
Sbjct 6311 CTCGAGGATGGCCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTCCATCTG 6252
Query 27613 GTCTTGCGTCTT 27624
||| | ||||||
Sbjct 6251 GTCCTTCGTCTT 6240
Score = 113 bits (124), Expect = 5e-20
Identities = 114/147 (78%), Gaps = 6/147 (4%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG- 27464
||||| |||||||| ||||| | || |||||||| || || || ||||| || |||
Sbjct 5952 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACGATCACACTCGAGGTCGA---AGGC 5896
Query 27465 --TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
||| | |||| || ||||||| || || ||||||||||| |||||||| ||||||
Sbjct 5895 TCTGACACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGAC 5836
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|||||||| || || ||||||||| ||
Sbjct 5835 CAGCAGCGCCTGATCTTTGCTGGTTAG 5809
>seq5716
Length=132174
Score = 170 bits (188), Expect = 2e-37
Identities = 380/566 (67%), Gaps = 7/566 (1%)
Strand=Plus/Minus
Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600
|||||| || | ||||| || || | | | ||||||||| | | || ||||| ||
Sbjct 122474 CCACATTTCATACTGCAGAATTCCTTGGCTCACTGGAGACCCCTCATAGGTTTCGTAAGG 122415
Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660
|| | ||| || || || || ||| | || || |||| ||||| |||||
Sbjct 122414 ACCATATTTCTCAGCAAGTTCGCATGACGCTTCCAGAGCTGCGTAGTAAATTGTTTCAAA 122355
Query 80661 GACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAA 80720
|| | |||||||||| | || ||||| ||| | ||||| || ||| | ||||||
Sbjct 122354 GATTCGCTTGTTCACATCTCGAGCCTGAGGGCTGGTGAACGGGTGGCGCATTAGCATGAA 122295
Query 80721 CACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTC 80780
| ||||||| |||||||| ||||| | || ||||| || |||||||| || ||
Sbjct 122294 GGCATCAGCCAAACCCTGAACTCCGATTCCTATTGGGCGATGACGCTTGTTAGAGGTTTC 122235
Query 80781 GGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAAC 80840
|| ||||| || || || |||| || || | ||||| |||||||| | ||
Sbjct 122234 AGCTTCCGGTATAGGATAGTAGTTGCAGTCAATTATTTTGTTCAAATTGCGTGTGATGAC 122175
Query 80841 CCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGTTCCCCTTCACAAATGCCGG 80897
| |||| || ||||| || | | ||||||| | || ||||||||||| | |
Sbjct 122174 CTTGGTAATCTCGTGAAGCTTTTCATAGTCGAAGGTCTTGTCATCCTTCACAAAT-CTGT 122116
Query 80898 --AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACG 80955
|| || | ||| ||||||||||| || || || || || | | ||| ||
Sbjct 122115 TCAAAGCG-ACGGAGGCCAGATTGCAAACAGCGACTTCATCTGGGGACGAGTACTGCACT 122057
Query 80956 ATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCG 81015
||||| ||||||| ||| || |||| || || |||| || |||||||| |||||
Sbjct 122056 ATTTCGGTGCACAGATTTGAGCACTTGATCGTTCCCAAATTCTTCTGGTTAGACTTTCGA 121997
Query 81016 TTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATG 81075
||||| || || ||||| |||||| || || ||||| |||| ||| || | | ||
Sbjct 121996 TTGCATGCATCTTTGTAAAGCATGTAAGGAGTTCCGGTTTCGATCTGCGAAGTAACAATC 121937
Query 81076 GCGTCCCAAATCTCGCGCGCCTTGAC 81101
| ||||||| |||| ||||| ||
Sbjct 121936 TCTTCCCAAAGAGCGCGAGCCTTCAC 121911
>seq616
Length=1528
Score = 170 bits (188), Expect = 2e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || |||||||| ||||| || ||||| ||| |
Sbjct 365 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACGATTACCCTGGAGGTCGAGGGCTCT 306
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | |||| | || || || || |||||||| || |||||||| |||||||||
Sbjct 305 GATACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGACCAG 246
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || ||||| || || ||||| |||||||||| ||| || | | ||||| ||
Sbjct 245 CAGCGCCTCATTTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTTTGTCCGACTACAAC 186
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| || || ||||| ||| | || || ||||| ||
Sbjct 185 ATCCAGAAGGAATCGACCCTCCATCTCGTCCTTCGGCTCCGCGGAGG 139
Score = 163 bits (180), Expect = 3e-35
Identities = 175/230 (76%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG- 27464
||||| ||||| ||||||||||| ||||| ||||| ||||||||||| ||||| |||
Sbjct 1327 ATGCAGATCTTCGTCAAGACGCTCACCGGAAAGACGATTACTCTTGAAGTTGA---AGGC 1271
Query 27465 --TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
||| | ||| | ||| | || || || || || |||||||| |||||||||||||||
Sbjct 1270 TCTGACACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAGGAAGGAATTCCTCCAGAC 1211
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||||| | || || || || ||||| |||||||||| || || | | |||||
Sbjct 1210 CAGCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACTTTGTCCGACTAC 1151
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | || ||||| || || || ||||| ||| | || |||||||| ||
Sbjct 1150 AACATTCAGAAGGAGTCAACCCTCCATCTCGTCCTTCGGCTTCGCGGAGG 1101
Score = 154 bits (170), Expect = 2e-32
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGA-GTCAG 27463
|||||| ||||| ||||| ||||| ||||||||||| || || | || || || | |
Sbjct 594 AATGCAGATCTTCGTCAAAACGCTCACCGGCAAGACGATCACCTTGGAAGTGGAAGGCTC 535
Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
| || | ||| | || ||||||| || || || |||||||| ||||| || |||||||
Sbjct 534 G-GACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATCCCCCCAGACC 476
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||||| || ||||| || || ||||| || ||||||| || ||||| | ||||| |
Sbjct 475 AGCAGCGCCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTTTCGGACTACA 416
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||| || |||||||| || ||||| ||| | || || ||||| ||
Sbjct 415 ACATCCAGAAAGAATCCACCCTCCATCTCGTCCTCCGACTCCGCGGAGG 367
Score = 145 bits (160), Expect = 9e-30
Identities = 171/230 (74%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | || |||||||| || ||||| || || || |||
Sbjct 1099 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAAGTGGA---AGGC 1043
Query 27466 ---GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | |||| || ||||||| || || ||||| || || |||||||| ||||||
Sbjct 1042 TCCGACACGATTGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGAATTCCCCCAGAC 983
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||||| | || || || || ||||| || || |||| ||| ||||| | |||||
Sbjct 982 CAGCAGCGATTGATCTTCGCCGGAAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTAC 923
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||| |||| |||||||| || || || || ||| | || |||||||| ||
Sbjct 922 AATATCCAGAAGGAATCGACCCTCCACCTCGTCCTTCGGCTTCGCGGAGG 873
Score = 107 bits (118), Expect = 2e-18
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || ||||| || || || |
Sbjct 871 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAAGTGGAAGGATCC 812
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || ||||||| || || || |||||||| |||||||||||||| |||
Sbjct 811 GACACGATTGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATTCCTCCAGATCAG 752
Query 27526 CAGCGTCTAATTTTTGCTGGTAAG 27549
||||| | || ||||||||| ||
Sbjct 751 CAGCGATTGATCTTTGCTGGTTAG 728
Score = 95.1 bits (104), Expect = 1e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | || |||||||| || || || || || || |
Sbjct 137 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACGATCACACTGGAAGTGGAAGGATCC 78
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || ||||||| || || |||||||| || |||||||| |||||||||
Sbjct 77 GACACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGACCAG 18
Query 27526 CAGCGTCTAATTTTTGC 27542
||||| || ||||| ||
Sbjct 17 CAGCGCCTCATTTTCGC 1
Score = 82.4 bits (90), Expect = 9e-11
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541
||||||| || || ||||||||||| |||||||| |||||||||||||| || || ||||
Sbjct 1524 TGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAGCAGCGCCTGATCTTTG 1465
Query 27542 CTGGTAAG 27549
||||| ||
Sbjct 1464 CTGGTTAG 1457
>seq4364
Length=177085
Score = 145 bits (160), Expect = 9e-30
Identities = 172/232 (74%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || ||||| || || |||||||| || || || || || ||| ||
Sbjct 157147 AATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACGATCACCCTGGAAGTCGAG---GG 157091
Query 27465 T---GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521
| || | ||||| || ||||||| || || || ||||| || || |||||||||||
Sbjct 157090 TTCGGACACCATTGAGAACGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCAGA 157031
Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581
||||||||| | || || || || ||||| ||||| || | ||| || || | || ||
Sbjct 157030 TCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAAGACGGTCGCACTCTCTCCGATTA 156971
Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|| |||| |||||||| || || ||||| || | || ||||||||||||
Sbjct 156970 CAACATCCAGAAGGAATCGACCCTCCATCTCGTACTCCGACTTCGCGGTGGA 156919
>seq5007
Length=89527
Score = 141 bits (156), Expect = 1e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || || || || ||||| || || || |||||||||
Sbjct 22258 ATGCAGATCTTTGTGAAAACCCTCACAGGGAAGACGATCACGCTCGAGGTTGAGGGCTCC 22199
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || ||||||| || || || |||||||| || || ||||||||||||
Sbjct 22198 GATACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAG 22139
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || |||||||||||||| | || || || | ||||| ||
Sbjct 22138 CAGCGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGCACGCTCTCCGACTACAAC 22079
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| || || || || || || ||||| ||| | ||||| || || |||
Sbjct 22078 ATTCAGAAAGAGTCGACCCTCCATCTCGTCCTTCGTCTGCGTGGGGGA 22031
Score = 141 bits (156), Expect = 1e-28
Identities = 170/230 (74%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || || || || ||||| || || || ||||| || |||
Sbjct 22486 ATGCAGATCTTTGTGAAAACCCTCACAGGGAAGACGATCACGCTCGAGGTCGA---AGGC 22430
Query 27466 ---GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|||| ||| | || ||||||| || || || |||||||| || || |||||||||
Sbjct 22429 TCCGATACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGAC 22370
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||||| || || || || || |||||||||||||| | || || || | |||||
Sbjct 22369 CAGCAGCGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGCACGCTCTCCGACTAC 22310
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| || || || || || ||||| ||| | ||||| ||||| ||
Sbjct 22309 AACATCCAGAAAGAGTCGACCCTCCATCTCGTCCTTCGTCTGCGCGGAGG 22260
>seq871
Length=2590
Score = 136 bits (150), Expect = 5e-27
Identities = 170/232 (73%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || ||||| || ||||| ||||| || || || || || || |||
Sbjct 498 AATGCAGATCTTCGTGAAGACCCTCACCGGGAAGACGATCACCCTGGAAGTGGA---AGG 554
Query 27465 T---GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521
| || ||||| | || | ||||| || || |||||||| || || ||||| || ||
Sbjct 555 TTCTGACAGCATCGAGAACGTAAAGGCGAAGATCCAGGACAAAGAAGGTATTCCCCCTGA 614
Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581
||||||||| | || || || || ||||| ||||| || | || ||||| |||||
Sbjct 615 TCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGAACCCTCAACGACTA 674
Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|| ||||||||||||| ||| | ||||| || | ||||| || ||||||
Sbjct 675 CAACATCCAAAAGGAATCGACTTTGCATCTCGTGCTCCGTCTCCGTGGTGGA 726
>seq2300
Length=323769
Score = 120 bits (132), Expect = 3e-22
Identities = 114/146 (78%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 27404 TAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAG 27463
||||||| || || ||||| || ||||| || ||||| ||||| || ||||| ||| |
Sbjct 1376 TAATGCAGATTTTCGTCAAAACCCTTACGGGTAAGACAATTACCCTCGAGGTGGAGGCTT 1435
Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||| | ||| | |||||||| || |||||||||||||| |||||||||||||
Sbjct 1436 CGGACACCATCGAGAATGTAAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCAGACC 1495
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAG 27549
|||| || || || || || ||||||
Sbjct 1496 AGCAACGCCTCATCTTCGCCGGTAAG 1521
>seq3368
Length=489
Score = 118 bits (130), Expect = 1e-21
Identities = 113/145 (78%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||||||||| ||||| || ||||||||||| || || || || || |||
Sbjct 163 AATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAAGTCGAGGGCTC 222
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||| | |||| | ||||| || || ||||| ||||| || ||||| ||||| ||
Sbjct 223 TGACACCATCGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCAGATCA 282
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAG 27549
|||||| | || ||||||||||||
Sbjct 283 GCAGCGCTTGATCTTTGCTGGTAAG 307
>seq311
Length=48857
Score = 118 bits (130), Expect = 1e-21
Identities = 127/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || ||||| || ||||| ||||| ||||| || || || || |
Sbjct 16605 AATGCAGATCTTCGTGAAGACCCTCACCGGGAAGACCATTACCCTCGAAGTCGAAGCTTC 16664
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| ||||| | || ||||||| || || ||||| |||||||| ||||||||||| ||
Sbjct 16665 TGACAGCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATTCCTCCAGATCA 16724
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT 27572
|||||| | || || || || ||||| ||||| || | || |||||
Sbjct 16725 GCAGCGCTTGATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGAACCCT 16772
Score = 98.7 bits (108), Expect = 1e-15
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 27502 AAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGAT 27561
||||| |||||||||||||| ||||||||| | || || || || ||||| ||||| ||
Sbjct 17032 AAGGAAGGAATTCCTCCAGATCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAAGAC 17091
Query 27562 GATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621
| || || || | ||||| || |||| |||||||| || |||||||| || | ||
Sbjct 17092 GGCCGAACTCTCTCCGACTACAACATCCAGAAGGAATCGACCCTTCATCTCGTACTCCGC 17151
Query 27622 CTTCGCGGTGGA 27633
|| || ||||||
Sbjct 17152 CTCCGTGGTGGA 17163
>seq1821
Length=3227
Score = 116 bits (128), Expect = 4e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 27404 TAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTT-GAGGTTGAGTCA 27462
||||||| || || ||||| || | || |||||||| | ||| | ||||| ||| |
Sbjct 1827 TAATGCAGATTTTCGTCAAAACTTTGACTGGCAAGACCAGC-CTCGTCGAGGTGGAGGCT 1769
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | | | ||| ||||||| ||||| |||| ||||| || | | | || |||
Sbjct 1768 TCGGACACCGCCGAAAACGTGAAGGCCAAAATCCAGGGCAAGGTTGGCACTTCGCCTGAC 1709
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||| || || | || || || |||||||| ||||||| || || || || |||||
Sbjct 1708 CAGCGACGCCTCGTCTTCGCCGGGAAGCAACTAGAGGATGGCCGCACTCTTGCGGACTAC 1649
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|| |||| ||||| || ||||||||||| ||| | ||||| || ||||||
Sbjct 1648 AACATCCAGAAGGAGTCGACTCTTCATCTGGTCCTTCGTCTGCGTGGTGGA 1598
>seq4684
Length=226209
Score = 105 bits (116), Expect = 8e-18
Identities = 179/273 (66%), Gaps = 46/273 (17%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | || |||||||| ||||| || ||||||||| |
Sbjct 8974 ATGCAGATTTTCGTCAAGACTTTGACTGGCAAGACCATTACCCTCGAGGTTGAGGCCTCC 8915
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| |||| | ||||| || || || |||||||| |||||||| ||||||||
Sbjct 8914 GACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAA 8855
Query 27526 CAGCGTCTAATTTTTGCTGGTA-------------------------------------- 27547
||||| || ||||| || ||||
Sbjct 8854 CAGCGACTGATTTTCGCCGGTATAATTTTAGTCTGTAGATTTTTTTTAACGAAGTGACTT 8795
Query 27548 --------AGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATC 27599
|||| || ||||||| |||||||| | ||||| || |||| ||||||||
Sbjct 8794 TGTAGGTAAGCAGCTTGAGGATGGACGTACCCTCTCTGACTACAACATCCAGAAGGAATC 8735
Query 27600 CACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||||||| ||| | ||||| || |||||
Sbjct 8734 AACTCTTCATCTTGTCCTTCGTCTCCGTGGTGG 8702
>seq3387
Length=880
Score = 102 bits (112), Expect = 9e-17
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 27404 TAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAG 27463
||||||| || || ||||| || || || || ||||| || || || ||||| ||| |
Sbjct 560 TAATGCAGATTTTCGTCAAAACCCTCACGGGTAAGACGATCACCCTCGAGGTGGAGGGAT 619
Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||||| ||| ||||||| || || |||||||||||||| ||||| || || |
Sbjct 620 CGGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCACCTGATC 679
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAG 27549
|||| || || || || || ||||||
Sbjct 680 AGCAACGCCTTATCTTCGCCGGTAAG 705
>seq3195
Length=29224
Score = 96.9 bits (106), Expect = 4e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 27404 TAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAG 27463
||||||| || || ||||| || || || || ||||| ||||| || ||||| ||| |
Sbjct 25170 TAATGCAGATTTTCGTCAAAACCCTAACGGGTAAGACAATTACCCTCGAGGTCGAGGCTT 25111
Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | || | ||| | || || || || ||||||||||| || ||||| |||||||
Sbjct 25110 CGGACACTATCGAGAATGTCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACC 25051
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAG 27549
||||||| || || || || ||||||
Sbjct 25050 AGCAGCGCCTGATCTTCGCCGGTAAG 25025
>seq5329
Length=523892
Score = 82.4 bits (90), Expect = 9e-11
Identities = 135/189 (71%), Gaps = 7/189 (4%)
Strand=Plus/Minus
Query 31164 CAAGAAAACAGATG--GGTCCAAAAAGTCT-CGAA--TTACGGGAATTCCGAAGCTCGAC 31218
||||| || | ||| | || || ||| || |||| | | |||||||||||| || |||
Sbjct 503936 CAAGACAAGAAATGCAGCTCAAAGAAGACTTCGAAACTGAAGGGAATTCCGAAACTGGAC 503877
Query 31219 GACGCCAACTGGGCCGGTACCCACAAGTCGCACGAGTGCACGCTTATTATTACCGAGGGT 31278
||||||||| ||||| || | ||| || || |||||| || ||| | || |||||
Sbjct 503876 GACGCCAACGACGCCGGAACGCGCAATTCTCATTTGTGCACCCTGATTCTGACTGAGGGA 503817
Query 31279 GACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTT-CGG 31337
|| || || || | ||||| || | || | |||||||||| ||| | |||| |||
Sbjct 503816 GATTCAGCCAAAACACTTGCGGTTTCGGGACTCGGTGTTGTGGGACGCGA-CCGTTACGG 503758
Query 31338 GGTGTTTCC 31346
||||| ||
Sbjct 503757 TGTGTTCCC 503749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570268810114080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |