Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq4364 131 1e-25
seq616 123 2e-23
seq871 120 3e-22
seq5007 118 9e-22
seq611 111 1e-19
>seq4364
Length=177085
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || |||||| | || || || ||||| || ||
Sbjct 157146 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACGATCACCCTGGAAGTCGAGGGTTCG 157087
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || ||||||||||||||||| || || |||||
Sbjct 157086 GACACCATTGAGAACGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCAGATCAG 157027
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | |||||| || || | |||||| || || | ||||||||||||
Sbjct 157026 CAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAAGACGGTCGCACTCTCTCCGATTACAAC 156967
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| |||||| | ||| | || | || | || ||||| ||
Sbjct 156966 ATCCAGAAGGAATCGACCCTCCATCTCGTACTCCGACTTCGCGGTGGAAT 156917
>seq616
Length=1528
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || ||||| ||| | |||||||||||||| ||| ||
Sbjct 1328 CATGCAGATCTTCGTCAAGACGCTCACCGGAAAGACGATTACTCTTGAAGTTGAAGGCTC 1269
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| |||||| || || |||||||| ||||| || || || || ||
Sbjct 1268 TGACACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAGGAAGGAATTCCTCCAGACCA 1209
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||| || || | |||||| || || | || || | || | ||||| |||||
Sbjct 1208 GCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACTTTGTCCGACTACAA 1149
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| ||| | ||| | || | || | || || |||||
Sbjct 1148 CATTCAGAAGGAGTCAACCCTCCATCTCGTCCTTCGGCTTCGCGGAGGCAT 1098
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || |||||| | ||||| || || || || ||
Sbjct 366 CATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACGATTACCCTGGAGGTCGAGGGCTC 307
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | || || | |||||| || || || ||||||||||| || || || || ||
Sbjct 306 TGATACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGACCA 247
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||| | || | |||||| || || | || || || || | ||||| |||||
Sbjct 246 GCAGCGCCTCATTTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTTTGTCCGACTACAA 187
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || ||||| |||||| | ||| | || | || | || || |||||
Sbjct 186 CATCCAGAAGGAATCGACCCTCCATCTCGTCCTTCGGCTCCGCGGAGGCAT 136
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || |||| |||||| | || || || ||||||||| ||
Sbjct 138 CATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACGATCACACTGGAAGTGGAAGGATC 79
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| ||||||||| || || || || || ||||||||||| || || || || ||
Sbjct 78 CGACACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGACCA 19
Query 27107 ACAGCG 27112
|||||
Sbjct 18 GCAGCG 13
>seq871
Length=2590
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043
||| |||||||| || || || || || ||||| ||| | || || || |||||||||
Sbjct 495 CGCAATGCAGATCTTCGTGAAGACCCTCACCGGGAAGACGATCACCCTGGAAGTGGAAGG 554
Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103
|| ||| || |||| || || || || || ||||||||||| || || || ||
Sbjct 555 TTCTGACAGCATCGAGAACGTAAAGGCGAAGATCCAGGACAAAGAAGGTATTCCCCCTGA 614
Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163
||| |||||||| || | |||||| || || | |||||| | ||| | ||| ||
Sbjct 615 TCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGAACCCTCAACGACTA 674
Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||| |||||||| ||||| || ||| | || | ||| | || |||||
Sbjct 675 CAACATCCAAAAGGAATCGACTTTGCATCTCGTGCTCCGTCTCCGTGGTGG 725
>seq5007
Length=89527
Score = 118 bits (130), Expect = 9e-22
Identities = 166/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044
||||||||||| ||||| ||||| || || || ||| | || || || || || |||
Sbjct 22489 GCCATGCAGATCTTTGTGAAAACCCTCACAGGGAAGACGATCACGCTCGAGGTCGAAGGC 22430
Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104
||||| | || |||| || || || || |||||||| |||||||| || || ||
Sbjct 22429 TCCGATACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGAC 22370
Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164
|| ||||| | || | |||||| || ||| | || ||| | || | ||||| |||
Sbjct 22369 CAGCAGCGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGCACGCTCTCCGACTAC 22310
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || || ||||||||| | ||| | || | ||| |||| || |||||
Sbjct 22309 AACATCCAGAAAGAGTCGACCCTCCATCTCGTCCTTCGTCTGCGCGGAGGCAT 22257
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| ||||| || || || ||| | || || || || || || ||
Sbjct 22259 CATGCAGATCTTTGTGAAAACCCTCACAGGGAAGACGATCACGCTCGAGGTTGAGGGCTC 22200
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| || || || || |||||||| |||||||| || || || ||
Sbjct 22199 CGATACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCA 22140
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||| | || | |||||| || ||| | || ||| | || | ||||| |||||
Sbjct 22139 GCAGCGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGCACGCTCTCCGACTACAA 22080
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||| || ||||||||| | ||| | || | ||| |||| || ||
Sbjct 22079 CATTCAGAAAGAGTCGACCCTCCATCTCGTCCTTCGTCTGCGTGGGGG 22032
>seq611
Length=17302
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||| |||||| | || || || || || ||| ||
Sbjct 4847 CATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACGATCACACTCGAGGTCGAAGGATC 4788
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| || || || || |||||||| ||||| || || || || ||
Sbjct 4787 GGACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCA 4728
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||| || || | ||| || || || ||||||| || ||| | ||||| |||||
Sbjct 4727 GCAGCGATTGATTTTCGCTGGAAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAA 4668
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || ||||||||||| | ||| | || | || | || ||||||||
Sbjct 4667 CATCCAGAAGGAGTCGACTCTCCATCTTGTCCTCCGACTCCGTGGTGGCAT 4617
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || ||||| || ||||| || | || || ||||| || ||| ||
Sbjct 5560 CATGCAGATCTTCGTCAAAACGCTCACCGGAAAAACCATCACCCTTGAGGTTGAAGGTTC 5501
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | || |||| || || || || ||||| || ||||| || || || |||||
Sbjct 5500 GGATACCATCGAGAACGTGAAGGCCAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCA 5441
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||| || || | |||||| || || |||||||| | ||| | || ||||||||
Sbjct 5440 GCAGCGATTGATCTTCGCCGGAAAGCAGTTGGAAGATGGCCGCACCCTCTCGGATTACAA 5381
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| ||||| || || | ||| | || | ||| | || || |||||
Sbjct 5380 CATTCAGAAGGAATCCACTCTCCATCTCGTCCTTCGTCTCCGAGGAGGCAT 5330
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || || || | || || ||||| || ||| ||
Sbjct 5332 CATGCAGATCTTCGTGAAGACGCTCACAGGAAAAACCATCACCCTTGAGGTTGAAGGTTC 5273
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| || || ||||| || ||||| ||||| || || || || ||
Sbjct 5272 CGATACCATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGAATTCCCCCAGACCA 5213
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||| | || | |||||| ||||| ||||||| | || | ||||| |||||
Sbjct 5212 GCAGCGCCTCATCTTCGCCGGAAAACAGCTGGAAGATGGCCGCACTTTGTCCGACTACAA 5153
Query 27167 CATTCAAAAGGAGTCGAC 27184
||| || |||||||||||
Sbjct 5152 CATCCAGAAGGAGTCGAC 5135
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || || || || || ||| | || || || || || ||| |||||| | |||
Sbjct 9449 TTCGTGAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTTGAAGGTTCCGACACTATT 9390
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || || || ||||| ||||| || || || || || ||||| |
Sbjct 9389 GAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAGCAGCGCCTC 9330
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | |||||| || || ||||||| | || | || || ||||||||||| |||
Sbjct 9329 ATTTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTCTCGGACTACAACATTCAGAAG 9270
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||| | ||| | ||| | ||| | || |||||
Sbjct 9269 GAGTCGACTCTCCATCTCGTTCTTCGTCTTCGTGGTGG 9232
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044
|| ||||| || || || ||||| || || |||||| | || || || || || || |
Sbjct 9866 GCAATGCAAATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGGCT 9807
Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104
|| ||| | || |||| || || || || || ||||| ||||| || || || |||
Sbjct 9806 TCGGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGAT 9747
Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164
|| ||||| | || | |||||| || || | || || | ||| | || || |||
Sbjct 9746 CAGCAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTAC 9687
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||||||||| | ||| | || | ||| | || || |||||
Sbjct 9686 AACATCCAGAAGGAGTCGACTCTCCATCTCGTCCTTCGTCTTCGCGGAGGCAT 9634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434886683575680
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