Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq5716 223 5e-53
>seq5716
Length=132174
Score = 223 bits (246), Expect = 5e-53
Identities = 503/758 (66%), Gaps = 21/758 (3%)
Strand=Plus/Minus
Query 77106 AGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTA 77165
||||||||||| ||||| ||||| || |||||||||| || | ||| ||||||| ||
Sbjct 122704 AGGAGATGAGGGTTAACGATTTGGAAGTCTCCAGACAGCACGCGTCGACTGTAAATGTTG 122645
Query 77166 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGC 77225
|| || || || | |||||||||||||| | |||||||| || || || || |||
Sbjct 122644 GACGTGTACGGCTCGATGGATTCATTGTTTCCAAGGATTTGAGCGGTTGATGCGGTCGGC 122585
Query 77226 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATAT 77285
|| || || | | | ||| || | | || || | |||||| ||||| ||| ||
Sbjct 122584 ATCGGGGCAAGAAGCAGACTGTTGCGTACCCCGTGCTTCGCGATTTTCTCTTTGAGAGAT 122525
Query 77286 TTCCAATCCCAAAGATCTGAAGGTACAACA------------------TCCCAAAGATCG 77327
||| || || |||||| ||| || || | ||| | ||
Sbjct 122524 GCCCAGTCACACTGATCTGTAGGGACGACTGGTTTGCCGTCTTCTGTTTGCCACATTTCA 122465
Query 77328 TATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTT 77387
|| || |||||||| | || | || || | ||| ||||| ||||| || | | |
Sbjct 122464 TACTGCAGAATTCCTTGGCTCACTGGAGACCCCTCATAGGTTTCGTAAGGACCATATTTC 122405
Query 77388 TCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTA 77447
||||| ||||| || |||||||| ||| |||| ||||||||||| || || |||
Sbjct 122404 TCAGCAAGTTCGCATGACGCTTCCAGAGCTGCGTAGTAAATTGTTTCAAAGATTCGCTTG 122345
Query 77448 TTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCT 77507
|| | |||| | || | | || ||||| | | | || || |||||||| ||
Sbjct 122344 TTCACATCTCGAGCCTGAGGGCTGGTGAACGGGTGGCGCATTAGCATGAAGGCATCAGCC 122285
Query 77508 AATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGA 77567
|| ||||||||||| || || || || | ||| | ||| || || ||| |||||| ||
Sbjct 122284 AAACCCTGAACTCCGATTCCTATTGGGCGATGACGCTTGTTAGAGGTTTCAGCTTCCGGT 122225
Query 77568 ATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACG 77627
|||||||| || || ||| || ||||| || | ||| | | || || |
Sbjct 122224 ATAGGATAGTAGTTGCAGTCAATTATTTTGTTCAAATTGCGTGTGATGACCTTGGTAATC 122165
Query 77628 TCCTTTAGTTTAAGAAAATCAAA--TCTT-CCATCTATAACAAACATGTTCAAAGCTATA 77684
|| | || || | | || || |||| |||| | ||||| |||||||||| |
Sbjct 122164 TCGTGAAGCTTTTCATAGTCGAAGGTCTTGTCATCCTTCACAAATCTGTTCAAAGCGACG 122105
Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACAT 77744
|| || ||||| ||||| || || |||| | | | || || | ||| ||||| ||
Sbjct 122104 GAGGCCAGATTGCAAACAGCGACTTCATCTGGGGACGAGTACTGCACTATTTCGGTGCAC 122045
Query 77745 AGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCC 77804
||||| || ||||| || |||| ||| | ||||| |||| |||||||| ||
Sbjct 122044 AGATTTGAGCACTTGATCGTTCCCAAATTCTTCTGGTTAGACTTTCGATTGCATGCATCT 121985
Query 77805 TTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842
|| ||||| || | ||||| |||||||| ||||| ||
Sbjct 121984 TTGTAAAGCATGTAAGGAGTTCCGGTTTCGATCTGCGA 121947
Score = 122 bits (134), Expect = 1e-22
Identities = 175/244 (72%), Gaps = 2/244 (1%)
Strand=Plus/Minus
Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457
|||||| ||||| || | || || | ||| || |||||||| || || | ||| ||
Sbjct 121133 AGTTCCGGCATTGAAAAGCGTAGGCGTTGCGTGTGTAAACCAGCGATCGGACATTAGGTT 121074
Query 78458 GTATGTTTCAATAGCTGATTCTAT-GTCCCATTGATGAATTCCTACCGCTACACGCATCA 78516
||| ||||||||||| | ||| || | | ||| || || || || || || |||||||
Sbjct 121073 GTAAGTTTCAATAGCGGCTTCAATTGAATCTTTG-TGGATACCCACAGCGACTCGCATCA 121015
Query 78517 ACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 78576
|| ||||| || | ||||| || | || |||||||||||||| || ||||
Sbjct 121014 GCAAGTGCTGTGGACGCTCAACAACTTTTTGGTTGATTTTCAACAAGTAAGAGCGCTCCA 120955
Query 78577 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTA 78636
| ||||| ||||| ||||| |||||||||| || | ||||| | |||| | ||||| |
Sbjct 120954 ACGTTTTGAAACCGAAATACGTGTATGAAAAATCGCGATCGTAGACAATAGCTGAATTCA 120895
Query 78637 GTTT 78640
|||
Sbjct 120894 ATTT 120891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694618141277760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |