Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5716 223 5e-53 >seq5716 Length=132174 Score = 223 bits (246), Expect = 5e-53 Identities = 503/758 (66%), Gaps = 21/758 (3%) Strand=Plus/Minus Query 77106 AGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTA 77165 ||||||||||| ||||| ||||| || |||||||||| || | ||| ||||||| || Sbjct 122704 AGGAGATGAGGGTTAACGATTTGGAAGTCTCCAGACAGCACGCGTCGACTGTAAATGTTG 122645 Query 77166 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGC 77225 || || || || | |||||||||||||| | |||||||| || || || || ||| Sbjct 122644 GACGTGTACGGCTCGATGGATTCATTGTTTCCAAGGATTTGAGCGGTTGATGCGGTCGGC 122585 Query 77226 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATAT 77285 || || || | | | ||| || | | || || | |||||| ||||| ||| || Sbjct 122584 ATCGGGGCAAGAAGCAGACTGTTGCGTACCCCGTGCTTCGCGATTTTCTCTTTGAGAGAT 122525 Query 77286 TTCCAATCCCAAAGATCTGAAGGTACAACA------------------TCCCAAAGATCG 77327 ||| || || |||||| ||| || || | ||| | || Sbjct 122524 GCCCAGTCACACTGATCTGTAGGGACGACTGGTTTGCCGTCTTCTGTTTGCCACATTTCA 122465 Query 77328 TATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTT 77387 || || |||||||| | || | || || | ||| ||||| ||||| || | | | Sbjct 122464 TACTGCAGAATTCCTTGGCTCACTGGAGACCCCTCATAGGTTTCGTAAGGACCATATTTC 122405 Query 77388 TCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTA 77447 ||||| ||||| || |||||||| ||| |||| ||||||||||| || || ||| Sbjct 122404 TCAGCAAGTTCGCATGACGCTTCCAGAGCTGCGTAGTAAATTGTTTCAAAGATTCGCTTG 122345 Query 77448 TTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCT 77507 || | |||| | || | | || ||||| | | | || || |||||||| || Sbjct 122344 TTCACATCTCGAGCCTGAGGGCTGGTGAACGGGTGGCGCATTAGCATGAAGGCATCAGCC 122285 Query 77508 AATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGA 77567 || ||||||||||| || || || || | ||| | ||| || || ||| |||||| || Sbjct 122284 AAACCCTGAACTCCGATTCCTATTGGGCGATGACGCTTGTTAGAGGTTTCAGCTTCCGGT 122225 Query 77568 ATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACG 77627 |||||||| || || ||| || ||||| || | ||| | | || || | Sbjct 122224 ATAGGATAGTAGTTGCAGTCAATTATTTTGTTCAAATTGCGTGTGATGACCTTGGTAATC 122165 Query 77628 TCCTTTAGTTTAAGAAAATCAAA--TCTT-CCATCTATAACAAACATGTTCAAAGCTATA 77684 || | || || | | || || |||| |||| | ||||| |||||||||| | Sbjct 122164 TCGTGAAGCTTTTCATAGTCGAAGGTCTTGTCATCCTTCACAAATCTGTTCAAAGCGACG 122105 Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACAT 77744 || || ||||| ||||| || || |||| | | | || || | ||| ||||| || Sbjct 122104 GAGGCCAGATTGCAAACAGCGACTTCATCTGGGGACGAGTACTGCACTATTTCGGTGCAC 122045 Query 77745 AGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCC 77804 ||||| || ||||| || |||| ||| | ||||| |||| |||||||| || Sbjct 122044 AGATTTGAGCACTTGATCGTTCCCAAATTCTTCTGGTTAGACTTTCGATTGCATGCATCT 121985 Query 77805 TTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842 || ||||| || | ||||| |||||||| ||||| || Sbjct 121984 TTGTAAAGCATGTAAGGAGTTCCGGTTTCGATCTGCGA 121947 Score = 122 bits (134), Expect = 1e-22 Identities = 175/244 (72%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 |||||| ||||| || | || || | ||| || |||||||| || || | ||| || Sbjct 121133 AGTTCCGGCATTGAAAAGCGTAGGCGTTGCGTGTGTAAACCAGCGATCGGACATTAGGTT 121074 Query 78458 GTATGTTTCAATAGCTGATTCTAT-GTCCCATTGATGAATTCCTACCGCTACACGCATCA 78516 ||| ||||||||||| | ||| || | | ||| || || || || || || ||||||| Sbjct 121073 GTAAGTTTCAATAGCGGCTTCAATTGAATCTTTG-TGGATACCCACAGCGACTCGCATCA 121015 Query 78517 ACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 78576 || ||||| || | ||||| || | || |||||||||||||| || |||| Sbjct 121014 GCAAGTGCTGTGGACGCTCAACAACTTTTTGGTTGATTTTCAACAAGTAAGAGCGCTCCA 120955 Query 78577 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTA 78636 | ||||| ||||| ||||| |||||||||| || | ||||| | |||| | ||||| | Sbjct 120954 ACGTTTTGAAACCGAAATACGTGTATGAAAAATCGCGATCGTAGACAATAGCTGAATTCA 120895 Query 78637 GTTT 78640 ||| Sbjct 120894 ATTT 120891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694618141277760