Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq5007 183 7e-41
seq616 178 3e-39
seq611 172 1e-37
seq4364 168 2e-36
seq871 168 2e-36
seq3387 131 4e-25
seq2300 122 2e-22
seq311 122 2e-22
seq3195 118 3e-21
seq4684 104 6e-17
seq3368 95.1 3e-14
>seq5007
Length=89527
Score = 183 bits (202), Expect = 7e-41
Identities = 164/206 (80%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || |||||||| |||||||| || |||||||| |||||||| ||| |||| ||
Sbjct 22483 CAGATCTTTGTGAAAACCCTCACAGGGAAGACGATCACGCTCGAGGTCGAAGGCTCCGAT 22424
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||||||||| || ||||| || ||||| ||||| |||||||| ||||||||
Sbjct 22423 ACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAGCAG 22364
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| || ||||| || ||| | || || |||| || ||| ||
Sbjct 22363 CGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGCACGCTCTCCGACTACAACATC 22304
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| ||||| || || || ||||| ||
Sbjct 22303 CAGAAAGAGTCGACCCTCCATCTCGT 22278
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || |||||||| |||||||| || |||||||| |||||||| || |||| ||
Sbjct 22255 CAGATCTTTGTGAAAACCCTCACAGGGAAGACGATCACGCTCGAGGTTGAGGGCTCCGAT 22196
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||||||||| || ||||| || ||||| ||||| |||||||| ||||||||
Sbjct 22195 ACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAGCAG 22136
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| || ||||| || ||| | || || |||| || ||| |
Sbjct 22135 CGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGCACGCTCTCCGACTACAACATT 22076
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| ||||| || || || ||||| ||
Sbjct 22075 CAGAAAGAGTCGACCCTCCATCTCGT 22050
>seq616
Length=1528
Score = 178 bits (196), Expect = 3e-39
Identities = 163/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| ||||| ||||| || || ||||||||| | || |||||| |||| |||
Sbjct 590 CAGATCTTCGTCAAAACGCTCACCGGCAAGACGATCACCTTGGAAGTGGAAGGCTCGGAC 531
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||||||||| || ||||| || ||||| ||||||||||| || ||||||||
Sbjct 530 ACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAGCAG 471
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||||||||| ||||| || ||||| | || ||| | || || ||| ||
Sbjct 470 CGCCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTTTCGGACTACAACATC 411
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| |||||||| || || ||||| ||
Sbjct 410 CAGAAAGAATCCACCCTCCATCTCGT 385
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| || || ||||| ||||| ||||| || |||| ||
Sbjct 362 CAGATCTTCGTGAAGACCCTCACTGGCAAGACGATTACCCTGGAGGTCGAGGGCTCTGAT 303
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || |||||| ||||| ||||||||||||||||| || || ||||||||
Sbjct 302 ACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGACCAGCAG 243
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||||||||| |||||||| ||||| | ||| | |||| || ||| ||
Sbjct 242 CGCCTCATTTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTTTGTCCGACTACAACATC 183
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || ||||| ||
Sbjct 182 CAGAAGGAATCGACCCTCCATCTCGT 157
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| ||||| ||||| || || || || ||| |||| |||
Sbjct 1324 CAGATCTTCGTCAAGACGCTCACCGGAAAGACGATTACTCTTGAAGTTGAAGGCTCTGAC 1265
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| |||||| ||||| || ||||| |||||||| ||||| ||||||||
Sbjct 1264 ACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAGGAAGGAATTCCTCCAGACCAGCAG 1205
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||||||||| |||||||| ||||| | ||| | |||| || ||| |
Sbjct 1204 CGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACTTTGTCCGACTACAACATT 1145
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || ||||| || ||||| ||
Sbjct 1144 CAGAAGGAGTCAACCCTCCATCTCGT 1119
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || | || || || || ||||| || || |||||| |||| |||
Sbjct 1096 CAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAAGTGGAAGGCTCCGAC 1037
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||||||| || ||||| ||||| ||||||||||| || || ||||||||
Sbjct 1036 ACGATTGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGAATTCCCCCAGACCAGCAG 977
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||||||||| ||||| |||||||| | || || |||| || || ||
Sbjct 976 CGATTGATCTTCGCCGGAAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAATATC 917
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || || || ||
Sbjct 916 CAGAAGGAATCGACCCTCCACCTCGT 891
Score = 102 bits (112), Expect = 2e-16
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || | || || || |||||||| || || |||||| | || |||
Sbjct 134 CAGATCTTTGTGAAGACCTTGACTGGCAAGACGATCACACTGGAAGTGGAAGGATCCGAC 75
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||||||| || ||||| ||||||||||||||||| || || ||||||||
Sbjct 74 ACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGACCAGCAG 15
Query 178044 CGACTTATCTTCGC 178057
|| || || |||||
Sbjct 14 CGCCTCATTTTCGC 1
>seq611
Length=17302
Score = 172 bits (190), Expect = 1e-37
Identities = 158/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || |||||||||||||| |||||||| ||||| ||| | || ||
Sbjct 5328 CAGATCTTCGTGAAGACGCTCACAGGAAAAACCATCACCCTTGAGGTTGAAGGTTCCGAT 5269
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct 5268 ACCATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGAATTCCCCCAGACCAGCAG 5209
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||||||||| |||||||| | ||| | |||| || ||| ||
Sbjct 5208 CGCCTCATCTTCGCCGGAAAACAGCTGGAAGATGGCCGCACTTTGTCCGACTACAACATC 5149
Query 178104 CAAAAAGAATCAACACTGCA 178123
|| || || || || || ||
Sbjct 5148 CAGAAGGAGTCGACTCTCCA 5129
Score = 165 bits (182), Expect = 2e-35
Identities = 160/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||||||||| ||||| || || || |||||||||||||| || || |||
Sbjct 9860 CAAATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGGCTTCGGAC 9801
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| |||||||| |||||||| || || || |||||
Sbjct 9800 ACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAGCAG 9741
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| |||||||| ||||| | || || | || || ||| ||
Sbjct 9740 CGCCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAACATC 9681
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||| ||
Sbjct 9680 CAGAAGGAGTCGACTCTCCATCTCGT 9655
Score = 159 bits (176), Expect = 8e-34
Identities = 159/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || | || || || |||||||| |||||||| ||| | || |||
Sbjct 4843 CAGATCTTCGTGAAGACCTTGACTGGCAAGACGATCACACTCGAGGTCGAAGGATCGGAC 4784
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||||||||| || ||||| || ||||| |||||||| || || ||||||||
Sbjct 4783 ACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAGCAG 4724
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | || ||||| ||||| ||||| |||||||| | || || |||| || ||| ||
Sbjct 4723 CGATTGATTTTCGCTGGAAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAACATC 4664
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||||||
Sbjct 4663 CAGAAGGAGTCGACTCTCCATCTTGT 4638
Score = 159 bits (176), Expect = 8e-34
Identities = 159/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| ||||| ||||| |||||||| |||||||| ||||| ||| | || ||
Sbjct 5556 CAGATCTTCGTCAAAACGCTCACCGGAAAAACCATCACCCTTGAGGTTGAAGGTTCGGAT 5497
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||||||||| || ||||| || || || |||||||| || || || |||||
Sbjct 5496 ACCATCGAGAACGTGAAGGCCAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCAGCAG 5437
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||||||||| ||| | |||||||| | || || | ||||| ||| |
Sbjct 5436 CGATTGATCTTCGCCGGAAAGCAGTTGGAAGATGGCCGCACCCTCTCGGATTACAACATT 5377
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || ||||| ||
Sbjct 5376 CAGAAGGAATCCACTCTCCATCTCGT 5351
Score = 159 bits (176), Expect = 8e-34
Identities = 156/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
|||||||| || ||||| ||||| || |||||||||||||| ||| | || ||||| ||
Sbjct 9449 TTCGTGAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTTGAAGGTTCCGACACTATT 9390
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| |||||||| |||||||| || || |||||||| || ||
Sbjct 9389 GAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAGCAGCGCCTC 9330
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
|| ||||||||||| ||||| |||||||| | ||||| | || || ||| | || ||
Sbjct 9329 ATTTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTCTCGGACTACAACATTCAGAAG 9270
Query 178110 GAATCAACACTGCATCTTGTT 178130
|| || || || ||||| |||
Sbjct 9269 GAGTCGACTCTCCATCTCGTT 9249
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || ||||| || || || || ||||| || || ||| | || |||
Sbjct 4615 CAGATTTTCGTGAAGACGCTCACTGGCAAGACCATTACCCTGGAAGTCGAAGGATCGGAC 4556
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||||||||| || ||||| || ||||| |||||||| || || ||||| ||
Sbjct 4555 ACTATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAACAG 4496
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| |||||||| ||||| | || || | || || ||| ||
Sbjct 4495 CGCCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTGTCGGACTACAACATC 4436
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || |||||||| || || || ||
Sbjct 4435 CAGAAGGAATCAACGCTCCACCTCGT 4410
Score = 134 bits (148), Expect = 3e-26
Identities = 110/134 (82%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
||||||||||| |||||||| ||||| ||| | || || ||||| |||||||| |||
Sbjct 5743 ACAGGAAAAACCATCACCCTTGAGGTTGAAGGTTCCGATACCATTGAGAACGTGAAAGCC 5684
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||| |||||||| |||||||| ||||| || ||||| || || || |||||||||||
Sbjct 5683 AAGATCCAGGACAAGGAAGGAATTCCTCCAGATCAGCAGCGCCTGATTTTCGCCGGAAAG 5624
Query 178065 CAGCTCGAAGATGG 178078
|| ||||| |||||
Sbjct 5623 CAACTCGAGGATGG 5610
Score = 104 bits (114), Expect = 6e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 178008 ATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAG 178067
|| |||||||| |||||||| || || |||||||| || || |||||||||||||| |||
Sbjct 6371 ATCCAGGACAAGGAAGGAATTCCCCCAGACCAGCAGCGCCTCATCTTCGCCGGAAAGCAG 6312
Query 178068 CTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTT 178127
||||| ||||| | || || |||| || ||| |||| || || || || || |||||
Sbjct 6311 CTCGAGGATGGCCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTCCATCTG 6252
Query 178128 GT 178129
||
Sbjct 6251 GT 6250
>seq4364
Length=177085
Score = 168 bits (186), Expect = 2e-36
Identities = 161/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| || || ||||||||||| || || || | || |||
Sbjct 157143 CAGATCTTCGTGAAGACCCTCACTGGCAAGACGATCACCCTGGAAGTCGAGGGTTCGGAC 157084
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| || ||||| || ||||||||||| || ||||| || |||||
Sbjct 157083 ACCATTGAGAACGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCAGATCAGCAG 157024
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||||||||| ||||||||||| || | ||||| ||||||| ||| ||
Sbjct 157023 CGTTTGATCTTCGCCGGAAAGCAGCTCGAAGACGGTCGCACTCTCTCCGATTACAACATC 156964
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || ||||| ||
Sbjct 156963 CAGAAGGAATCGACCCTCCATCTCGT 156938
>seq871
Length=2590
Score = 168 bits (186), Expect = 2e-36
Identities = 161/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| || || ||||||||||| || |||||| | || |||
Sbjct 502 CAGATCTTCGTGAAGACCCTCACCGGGAAGACGATCACCCTGGAAGTGGAAGGTTCTGAC 561
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
| |||||||||||| || ||||| |||||||||||||| || || || || |||||
Sbjct 562 AGCATCGAGAACGTAAAGGCGAAGATCCAGGACAAAGAAGGTATTCCCCCTGATCAGCAG 621
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||||||||| ||||||||||| || | || || ||| || ||| ||
Sbjct 622 CGTTTGATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGAACCCTCAACGACTACAACATC 681
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| ||||| || ||||||| ||
Sbjct 682 CAAAAGGAATCGACTTTGCATCTCGT 707
>seq3387
Length=880
Score = 131 bits (144), Expect = 4e-25
Identities = 113/140 (81%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| ||||| ||||| || || |||||||||||||||||||| | || |||
Sbjct 565 CAGATTTTCGTCAAAACCCTCACGGGTAAGACGATCACCCTCGAGGTGGAGGGATCGGAC 624
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||| || || ||||| |||||||| || || || || || || ||||||
Sbjct 625 ACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCACCTGATCAGCAA 684
Query 178044 CGACTTATCTTCGCCGGAAA 178063
|| |||||||||||||| ||
Sbjct 685 CGCCTTATCTTCGCCGGTAA 704
>seq2300
Length=323769
Score = 122 bits (134), Expect = 2e-22
Identities = 111/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| ||||| || || || || || || |||||||||||||| || |||
Sbjct 1381 CAGATTTTCGTCAAAACCCTTACGGGTAAGACAATTACCCTCGAGGTGGAGGCTTCGGAC 1440
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| |||||||| || || || ||||| |||||||||
Sbjct 1441 ACCATCGAGAATGTAAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAA 1500
Query 178044 CGACTTATCTTCGCCGGAAA 178063
|| || ||||||||||| ||
Sbjct 1501 CGCCTCATCTTCGCCGGTAA 1520
>seq311
Length=48857
Score = 122 bits (134), Expect = 2e-22
Identities = 120/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| || || || || |||||||| || ||| || |||
Sbjct 16609 CAGATCTTCGTGAAGACCCTCACCGGGAAGACCATTACCCTCGAAGTCGAAGCTTCTGAC 16668
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
| |||||||||||| || ||||| ||||| || || || || ||||| || |||||
Sbjct 16669 AGCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATTCCTCCAGATCAGCAG 16728
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| | |||||||||||||| ||||||||||| ||
Sbjct 16729 CGCTTGATCTTCGCCGGAAAGCAGCTCGAAGACGG 16763
Score = 96.9 bits (106), Expect = 8e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 178017 AAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGAT 178076
|| |||||||| ||||| || ||||| || | |||||||||||||| |||||||||||
Sbjct 17032 AAGGAAGGAATTCCTCCAGATCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAAGAC 17091
Query 178077 GGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| | ||||| |||| || ||| |||| || ||||| || || ||||| ||
Sbjct 17092 GGCCGAACTCTCTCCGACTACAACATCCAGAAGGAATCGACCCTTCATCTCGT 17144
>seq3195
Length=29224
Score = 118 bits (130), Expect = 3e-21
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| ||||| || || || || || || ||||||||||| || || |||
Sbjct 25165 CAGATTTTCGTCAAAACCCTAACGGGTAAGACAATTACCCTCGAGGTCGAGGCTTCGGAC 25106
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| |||||| ||||| |||||||| ||||| || || || ||||||||
Sbjct 25105 ACTATCGAGAATGTCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAG 25046
Query 178044 CGACTTATCTTCGCCGGAAA 178063
|| || ||||||||||| ||
Sbjct 25045 CGCCTGATCTTCGCCGGTAA 25026
>seq4684
Length=226209
Score = 104 bits (114), Expect = 6e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||| | || || || || || ||||||||||| || ||| |||
Sbjct 8971 CAGATTTTCGTCAAGACTTTGACTGGCAAGACCATTACCCTCGAGGTTGAGGCCTCCGAC 8912
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || ||||| ||||| || ||||| |||||||| || || ||||| ||
Sbjct 8911 ACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAACAG 8852
Query 178044 CGACTTATCTTCGCCGG 178060
||||| || ||||||||
Sbjct 8851 CGACTGATTTTCGCCGG 8835
>seq3368
Length=489
Score = 95.1 bits (104), Expect = 3e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || ||||| || ||||| || || || |||||||| || || || |||| |||
Sbjct 167 CAAATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAAGTCGAGGGCTCTGAC 226
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || ||||| || || || || |||||
Sbjct 227 ACCATCGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCAGATCAGCAG 286
Query 178044 CGACTTATCTTCGCCGGAAA 178063
|| | ||||| || || ||
Sbjct 287 CGCTTGATCTTTGCTGGTAA 306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203641223349796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |