Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq5694 86.0 1e-11
seq7101 84.2 5e-11
seq7009 84.2 5e-11
seq6884 84.2 5e-11
seq6279 84.2 5e-11
seq1716 84.2 5e-11
seq1127 84.2 5e-11
>seq5694
Length=52579
Score = 86.0 bits (94), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACGA 165776
|||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| |
Sbjct 8422 TAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGTGGGTTCGAGCCCCGCAT 8363
Query 165777 TGGGC 165781
|||||
Sbjct 8362 TGGGC 8358
>seq7101
Length=8895
Score = 84.2 bits (92), Expect = 5e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||| ||||||| ||||||||| |||| |||||||||
Sbjct 7948 TGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 8007
Query 165769 CCCC 165772
||||
Sbjct 8008 CCCC 8011
>seq7009
Length=22503
Score = 84.2 bits (92), Expect = 5e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||| ||||||| ||||||||| |||| |||||||||
Sbjct 17980 TGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 18039
Query 165769 CCCC 165772
||||
Sbjct 18040 CCCC 18043
>seq6884
Length=41230
Score = 84.2 bits (92), Expect = 5e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||| ||||||| ||||||||| |||| |||||||||
Sbjct 40642 TGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 40701
Query 165769 CCCC 165772
||||
Sbjct 40702 CCCC 40705
>seq6279
Length=32266
Score = 84.2 bits (92), Expect = 5e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||| ||||||| ||||||||| |||| |||||||||
Sbjct 23206 TGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 23265
Query 165769 CCCC 165772
||||
Sbjct 23266 CCCC 23269
>seq1716
Length=7462
Score = 84.2 bits (92), Expect = 5e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||| ||||||| ||||||||| |||| |||||||||
Sbjct 4265 TGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 4324
Query 165769 CCCC 165772
||||
Sbjct 4325 CCCC 4328
>seq1127
Length=5373
Score = 84.2 bits (92), Expect = 5e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||| ||||||| ||||||||| |||| |||||||||
Sbjct 4236 TGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 4295
Query 165769 CCCC 165772
||||
Sbjct 4296 CCCC 4299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057722214191300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |