Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2290 134 2e-26 seq4924 89.7 6e-13 seq6693 87.8 2e-12 >seq2290 Length=1989 Score = 134 bits (148), Expect = 2e-26 Identities = 140/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 ||||| | ||||| ||||||||| | ||||||||| || ||||||||||| ||||| Sbjct 903 TGGGCCATCATGTGGGTCAGCAGAGCGTAGCTGGCGATATTGAAGGGCACACCCAGGAAA 962 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGG 145881 || ||| | ||||||||| ||||||||||| |||| || | || || ||||||||| Sbjct 963 ATATCCGCACTGCGCTGGTAGAGCTGGCAGGACAGCTTGCCATCGGCTACATAGAACTGG 1022 Query 145882 CACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTG 145941 ||||| |||||| || ||||| ||||| | || |||||| ||||||||| | | Sbjct 1023 AACAGGGCGTGGCAAGGGGGCAGAGCCATCTGGCCCACATCCGCCACGTTCCAGGCCGAG 1082 Query 145942 AGGA 145945 | || Sbjct 1083 ACGA 1086 >seq4924 Length=20857 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 || |||| ||||| || || || |||||||| |||||||||||||| || || || Sbjct 480 TGCGCGATCATGTGAGTGAGGAGACCATAGCTGGCGATGTTGAAGGGCACTCCAAGGGCC 421 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGG 145881 || || || || |||||||| || || || || || |||||| | || |||||||| Sbjct 420 ATATCGCCGGAACGCTGGTATAGTTGACACGACAGTTCCCCGTCGCTTACATAGAACTGA 361 Query 145882 CACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||| | ||||| || |||| ||||| Sbjct 360 CACATGGTATGGCACGGTGGCAATGCCAT 332 Score = 89.7 bits (98), Expect = 6e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 || || | ||||| ||| || || ||||||||||||||||||||||| || || || Sbjct 701 TGTGCTATCATGTGGGTTAGAAGACCATAGCTGGCTATGTTGAAGGGCACTCCAAGGGCC 642 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGG 145881 || || || || |||||||||| |||||| || || || || | ||||||||||| Sbjct 641 ATATCGCCGGAACGCTGGTACAACTGGCACGACAGTTCGCCATCGCTGACGTAGAACTGA 582 Query 145882 CACA 145885 |||| Sbjct 581 CACA 578 >seq6693 Length=129131 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/148 (74%), Gaps = 6/148 (4%) Strand=Plus/Minus Query 146123 CGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGG---AGAGCT 146179 |||||||| | || || || || | |||||||||||||||||| ||||| || ||| Sbjct 98497 CGAGGAAGGCGCGCGAGCCATTCGGCTCCCAGATCTTGACGCCCTTCGCGCTCAAGTGCT 98438 Query 146180 CATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGA 146239 ||| | || ||| || | ||||||||| | ||||| || |||| ||| |||||| Sbjct 98437 --TTGCATTC-GTGTCGCCACGGATGAACCACAAGAGCTCCTCCAGGATACCCTTCCAGA 98381 Query 146240 AGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 |||||| ||| || ||||| || || || Sbjct 98380 AGACCCGCTTCGTCGTCAGAAGTGGCAA 98353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590021406540400