Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq7237 165 2e-35 seq5985 116 8e-21 >seq7237 Length=102105 Score = 165 bits (182), Expect = 2e-35 Identities = 222/309 (72%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| || |||||| || || |||||||| || || || ||| ||||||||||| Sbjct 86321 TTCAAGACCCTGGAGCGCTCCTACCTCCTCAAGATCGACGGGAAGGTCGTGGAACGACCC 86262 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 || || ||| ||||||| ||||| ||||| || |||||||| ||||| | || || Sbjct 86261 CAACATATGCTGATGCGCGTGGCCGTCGGAATCCACAAGGAAGACATCAACGCCGCCATC 86202 Query 248953 GAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAAC 249012 || || |||| | ||| || || ||| | || |||||| | ||||||||||||||| Sbjct 86201 GAAACCTACAACCTCATGTCCGAGCGGTGGTTCACCCATGCCTCGCCGACGCTCTTCAAC 86142 Query 249013 GCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCT 249072 ||||| ||| ||| ||| ||||||| ||||| || || ||||| |||||||| Sbjct 86141 GCCGGCACCTGCAAGCCCCAGATGAGCTCCTGCTTCCTGCTCACCATGAGTGACGACTCC 86082 Query 249073 GTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCGGA 249132 |||||||||| | | || || ||| || ||| || || | ||| |||||| Sbjct 86081 ATCGACGGCATCTTCAAGACCCTCTGGCAGTGCGCTCTGATCTCCAAGTCCGCCGGCGGA 86022 Query 249133 ATCGGTCTC 249141 ||||| ||| Sbjct 86021 ATCGGCCTC 86013 >seq5985 Length=30949 Score = 116 bits (128), Expect = 8e-21 Identities = 123/162 (76%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 254218 TCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAA 254277 ||||||| ||||||||||||||| ||||||| | | || ||| ||||||||||||| | Sbjct 10149 TCGTGATTCTGGACGAGGCGGACGCCATGACTTCTGCGGCACAGGCCGCCCTCCGCCGGA 10208 Query 254278 CGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGA 254337 | ||||||| | |||| || || || | | || | ||||||||| | || | | Sbjct 10209 CAATGGAGAGCGAATCCGGCACCACCCGCTTCTTCTTGATCTGCAACTACATCTCAAGAA 10268 Query 254338 TCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||||| ||| ||| ||||||| ||||| || || ||||||| Sbjct 10269 TCATCGACCCCCTGACTTCTCGATGCGCGAAATTCCGATTCA 10310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073663080183680