Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2066 82.4 6e-11 >seq2066 Length=2850 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || |||| || |||| |||||| || ||||| ||||| ||||||||||| | Sbjct 1432 TCCACCGCGAAGTCGGAGAACCAGGTGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGA 1491 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || ||| | ||| || | || || || || |||| || | |||||||| ||| Sbjct 1492 CAATGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGATCTGGGGG 1551 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||||||| || || | |||||| | | | ||||| || ||| Sbjct 1552 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGGCTTCGAC 1611 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | |||||| | ||||| ||||| || || || || || ||||| Sbjct 1612 TTCGAGGGTGATCGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379309279354950