Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq784 156 1e-33 >seq784 Length=524 Score = 156 bits (172), Expect = 1e-33 Identities = 287/418 (69%), Gaps = 2/418 (0%) Strand=Plus/Minus Query 12834 CTGGAGTCCGAACCGCTGACCAAGCTGCTCGAGGAAAACGCATACCGCGAAATGCTCTGG 12893 ||||| ||| ||| ||||||||||||| |||| ||| |||||| | ||||| Sbjct 424 CTGGAAAGCGACCCGGTGACCAAGCTGCTGGAGGTGGGCGCGTACCGCAAGCTGCTCAAT 365 Query 12894 CGCCAGCGGGTCAACGAGGCGGCTCTCGCCAACATGCTGGCCAGCGCCCAGGGCGCTGAC 12953 || |||||||||||| || || || |||||||| ||||||||| ||| Sbjct 364 CGGGCGCGGGTCAACGATGCCGCCAAGGCGCTGCTGCTGGCCTATGCCCAGGGCAGCGAC 305 Query 12954 CTCGACCAGCTCGCCGCGAAC-TACAACGTCAAGCGCCTGGTCATCCAGCCTGGAGATCC 13012 || |||||||| || || ||| | || | ||||||| ||||| | ||| | | ||| | Sbjct 304 CTGGACCAGCTGGCAGCCAACGTGCAGC-TCAAGCGGCTGGTGGTACAGGCCGAAGACGC 246 Query 13013 GTCGAAGGTGCCGCCCGTGCCGGAACTGCTGGAGTCCGACGACAGCCTGCGCGAGCGGGC 13072 | | ||||| || | ||| |||| ||| ||||| ||||||||||||| Sbjct 245 GAACAGTGTGCCACCGACCCTCGAAGTGCTTGAGGAAGACGATGCACTGCGCGAGCGGGT 186 Query 13073 GCAGATGGCCTGGGAAGGCCTCAGCACCGCGGGACCGCGTAACAGCTACATCTTCCACGC 13132 ||| ||| | || ||||| | |||||| || ||||| |||||||||||| | || || Sbjct 185 GCAACTGGTGTACGAGGGCCTGACCACCGCCGGCCCGCGCAACAGCTACATCCTGCATGC 126 Query 13133 CCGCGCCGCCGACGGTCGCGTCGGCGATGCCTCGGCCGTCAGCCCATCGCCTGCCGTTGT 13192 ||| ||| || | || | ||||||||| || | ||||| || || || || || Sbjct 125 ACGCAATGCCTCGGGGCAGGTGGCCGATGCCTCTGCAGAAAGCCCGTCACCGGCAGTGGT 66 Query 13193 CGTGGTGACGGTGCAGGCCGCCCAGGGCAACGGCAGCGCCCCGGCGGACCTGCTGGCC 13250 | ||||||||||| | | ||| |||||| |||| ||| | |||||||| Sbjct 65 GGAGGTGACGGTGCTGAGCCTGGAGGAGGACGGCATCGCCAGTGCGCAGTTGCTGGCC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113724257024040