Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq7237 96.9 5e-15 >seq7237 Length=102105 Score = 96.9 bits (106), Expect = 5e-15 Identities = 321/492 (65%), Gaps = 8/492 (2%) Strand=Plus/Plus Query 80089 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 80148 ||||||||||| || || | ||| | ||||||||| || || || | || ||| ||||| Sbjct 85888 TTGTTTCCTCCTTGGTCGACGTAGCGAGCGGTGTTGTTGTAGACCCGCAGCATAGGAATG 85947 Query 80149 ATACCATTGGATGTACCATTGGTCCCGGAGAT-ATAGCTTCCACTGGCACGAAT--ATTA 80205 | || ||||| || || |||||||| | ||| | || |||| ||| ||||| | | Sbjct 85948 AGTCCGTTGGAGGTGCCGTTGGTCCCAGCGATGAGAG-TTCCGGAGGCTCGAATGCAGTG 86006 Query 80206 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 80265 |||| || || ||||| || || || ||||| | ||||| | | || Sbjct 86007 GACATTG--AGGCCGATTCCGCCGGCGGACTTGGAGATCAGAGCGCACTGCCAGAGGGTC 86064 Query 80266 TCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGG 80325 | ||||||| || ||| || ||| ||||| | || || || ||| ||| ||| Sbjct 86065 TTGAAGATGCCGTCGATGGAGTCGTCACTCATGGTGAGCAGGAAGCAGGAGCTCATCTGG 86124 Query 80326 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 80385 | | || || || || || | || || || || || || ||||| || ||| Sbjct 86125 GGCTTGCAGGTGCCGGCGTTGAAGAGCGTCGGCGAGGCATGGGTGAACCACCGCTCGGAC 86184 Query 80386 AGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGAC 80444 | || ||||| || || || || | | || || | ||| || ||||| || || || Sbjct 86185 ATGAGGTTGTAGGTTTCGATGGCGGCGTTGATGTCTTCCTTG-TGGATTCCGACGGCCAC 86243 Query 80445 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGA 80504 ||||| | ||| || || |||| ||| |||| ||| | || || | | ||| || Sbjct 86244 GCGCATCAGCATATGTTGGGGTCGTTCCACGACCTTCCCGTCGATCTTGAGGAGGTAGGA 86303 Query 80505 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 80564 |||| || || || || || ||| |||| ||||| || ||||| | || | Sbjct 86304 GCGCTCCAGGGTCTTGAAGCCGAAGTAGGTGTAGTTGAAGTCGCGGTCGTAGACGATGGC 86363 Query 80565 CGAGTTGAGTTT 80576 ||||||||| || Sbjct 86364 CGAGTTGAGCTT 86375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718201372516400