Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq5063 91.5 1e-13 >seq5063 Length=4177 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | ||||| ||||| | || || | || || | ||| || ||||| || Sbjct 2246 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAA 2305 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 ||||| ||||||||||| | || | |||||||| || |||| | ||||| | Sbjct 2306 GATCAAGCGCTGTTGATCTGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCCTTGACGTT 2365 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | |||||| || ||||| || | || || || || ||||| ||||| ||||| Sbjct 2366 CTCGATCGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTCAC 2425 Query 43098 AAAAATTTGCATT 43110 ||| ||||||||| Sbjct 2426 AAAGATTTGCATT 2438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381334693955580