Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq7237 93.3 6e-14
>seq7237
Length=102105
Score = 93.3 bits (102), Expect = 6e-14
Identities = 320/492 (65%), Gaps = 8/492 (2%)
Strand=Plus/Plus
Query 72172 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 72231
||||||||||| || || | ||| | ||||||||| || || || | || ||| |||||
Sbjct 85888 TTGTTTCCTCCTTGGTCGACGTAGCGAGCGGTGTTGTTGTAGACCCGCAGCATAGGAATG 85947
Query 72232 ATACCATTGGATGCACCATTGGTCCCGGAGAT-ATAGCTTCCACTGGCACGAAT--ATTG 72288
| || ||||| | || |||||||| | ||| | || |||| ||| ||||| | ||
Sbjct 85948 AGTCCGTTGGAGGTGCCGTTGGTCCCAGCGATGAGAG-TTCCGGAGGCTCGAATGCAGTG 86006
Query 72289 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 72348
|||| || || ||||| || || || ||||| | ||||| | | ||
Sbjct 86007 GACATTG--AGGCCGATTCCGCCGGCGGACTTGGAGATCAGAGCGCACTGCCAGAGGGTC 86064
Query 72349 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 72408
| ||||||| || || || || ||||| | || || || ||| ||| |||
Sbjct 86065 TTGAAGATGCCGTCGATGGAGTCGTCACTCATGGTGAGCAGGAAGCAGGAGCTCATCTGG 86124
Query 72409 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 72468
| | || || || || || | || || || || || || ||||| || |||
Sbjct 86125 GGCTTGCAGGTGCCGGCGTTGAAGAGCGTCGGCGAGGCATGGGTGAACCACCGCTCGGAC 86184
Query 72469 AGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCCTACCGCGAC 72527
| || ||||| || || || || | | || || | ||| || ||||| || || ||
Sbjct 86185 ATGAGGTTGTAGGTTTCGATGGCGGCGTTGATGTCTTCCTTG-TGGATTCCGACGGCCAC 86243
Query 72528 ACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGA 72587
||||| | |||||| || |||| ||| |||| ||| | || || | | ||||||
Sbjct 86244 GCGCATCAGCATATGTTGGGGTCGTTCCACGACCTTCCCGTCGATCTTGAGGAGGTAGGA 86303
Query 72588 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 72647
|||| || || || || || ||| |||| ||||| || ||||| | || |
Sbjct 86304 GCGCTCCAGGGTCTTGAAGCCGAAGTAGGTGTAGTTGAAGTCGCGGTCGTAGACGATGGC 86363
Query 72648 CGAATTGAGTTT 72659
||| ||||| ||
Sbjct 86364 CGAGTTGAGCTT 86375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671076196807600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |