Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq7237 93.3 6e-14 >seq7237 Length=102105 Score = 93.3 bits (102), Expect = 6e-14 Identities = 320/492 (65%), Gaps = 8/492 (2%) Strand=Plus/Plus Query 72172 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 72231 ||||||||||| || || | ||| | ||||||||| || || || | || ||| ||||| Sbjct 85888 TTGTTTCCTCCTTGGTCGACGTAGCGAGCGGTGTTGTTGTAGACCCGCAGCATAGGAATG 85947 Query 72232 ATACCATTGGATGCACCATTGGTCCCGGAGAT-ATAGCTTCCACTGGCACGAAT--ATTG 72288 | || ||||| | || |||||||| | ||| | || |||| ||| ||||| | || Sbjct 85948 AGTCCGTTGGAGGTGCCGTTGGTCCCAGCGATGAGAG-TTCCGGAGGCTCGAATGCAGTG 86006 Query 72289 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 72348 |||| || || ||||| || || || ||||| | ||||| | | || Sbjct 86007 GACATTG--AGGCCGATTCCGCCGGCGGACTTGGAGATCAGAGCGCACTGCCAGAGGGTC 86064 Query 72349 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 72408 | ||||||| || || || || ||||| | || || || ||| ||| ||| Sbjct 86065 TTGAAGATGCCGTCGATGGAGTCGTCACTCATGGTGAGCAGGAAGCAGGAGCTCATCTGG 86124 Query 72409 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 72468 | | || || || || || | || || || || || || ||||| || ||| Sbjct 86125 GGCTTGCAGGTGCCGGCGTTGAAGAGCGTCGGCGAGGCATGGGTGAACCACCGCTCGGAC 86184 Query 72469 AGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCCTACCGCGAC 72527 | || ||||| || || || || | | || || | ||| || ||||| || || || Sbjct 86185 ATGAGGTTGTAGGTTTCGATGGCGGCGTTGATGTCTTCCTTG-TGGATTCCGACGGCCAC 86243 Query 72528 ACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGA 72587 ||||| | |||||| || |||| ||| |||| ||| | || || | | |||||| Sbjct 86244 GCGCATCAGCATATGTTGGGGTCGTTCCACGACCTTCCCGTCGATCTTGAGGAGGTAGGA 86303 Query 72588 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 72647 |||| || || || || || ||| |||| ||||| || ||||| | || | Sbjct 86304 GCGCTCCAGGGTCTTGAAGCCGAAGTAGGTGTAGTTGAAGTCGCGGTCGTAGACGATGGC 86363 Query 72648 CGAATTGAGTTT 72659 ||| ||||| || Sbjct 86364 CGAGTTGAGCTT 86375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671076196807600