Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2592 179 5e-40 seq545 127 3e-24 >seq2592 Length=18905 Score = 179 bits (198), Expect = 5e-40 Identities = 239/332 (72%), Gaps = 9/332 (3%) Strand=Plus/Minus Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || ||||||||||| || ||||||||||| || || || || |||||||| |||||| Sbjct 15190 GCCTTCGCCGCCGTGGAAGGCATCTTCTTCTCCGGATCCTTCGCCGCCATCTTCTGGCTC 15131 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 ||||||||||| || |||||||| || || ||||| ||||| | || || || ||||| Sbjct 15130 AAGAAGCGCGGCCTGATGCCCGGCCTCACCCACAGCAACGAACTCATCTCCCGGGACGAA 15071 Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGA 125612 ||||| ||| | ||||| ||| || ||| ||| || ||| ||| ||| Sbjct 15070 GGCCTCCACCGCGACTTCGCCTGCCTCATGT---ACAAGTACCTG------GAGAGCAAG 15020 Query 125613 TCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTT 125672 ||||| | | |||||| | | || | ||| ||||| ||| || || |||| Sbjct 15019 CCCAGCCAGAAGCAGGTCAACGAGATCATCCGCGAGGCCGTCCAGATCGAGCAGGAGTAC 14960 Query 125673 CTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTAC 125732 || || ||| ||||||| || |||||| |||||||||||| ||||||| | ||||| Sbjct 14959 CTGACAGAAGCCCTACCCGTGGACATGATCGGCATGAACTGCCGCCTAATGTCCCAGTAC 14900 Query 125733 ATAGAGTTTGTGGCAGATCGTCTACTGTACGA 125764 ||||||| ||||| || | ||||| |||| Sbjct 14899 ATAGAGTACGTGGCCGACCACCTACTTAACGA 14868 >seq545 Length=59741 Score = 127 bits (140), Expect = 3e-24 Identities = 234/343 (68%), Gaps = 0/343 (0%) Strand=Plus/Minus Query 127101 TTTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGT 127160 ||| | ||| ||||||| | |||| || || | ||||| |||||| || || ||||| Sbjct 13136 TTTTCTGTAGAAGATGAGGGCTCCTCGGGGTCCACGGAGAGACTTGTGAGTCGTCGTGGT 13077 Query 127161 CACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCAAT 127220 || ||||| ||||| ||||| || | |||| || |||| | || || || Sbjct 13076 GACGATGTCCGCGTACTCGAAGGGAGACGGGACGACTCCTCCAGCAACGAGACCGGCGAT 13017 Query 127221 GTGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTCT 127280 ||| || || |||||||||| ||| |||| |||||| |||| |||||||| Sbjct 13016 GTGAGCCATGTCGGCCATCAAGTAGGCGCCGCACTTATCGGCGATCTTGCGGAATCGGGC 12957 Query 127281 ATAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATAG 127340 ||||| | | | || | ||||| || |||| || | ||| | | |||| ||| || Sbjct 12956 GTAGTCGAGGTGGCGGGCGTAGCAGCTCATGCCAGCGACGATGACCTTAGGGCGGAAGAG 12897 Query 127341 ATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGTA 127400 | || ||| |||| | | | ||||||| ||| || |||| || | ||||||||| Sbjct 12896 CATAGCGTTCTGCTCAAGCTGGTCGTAGTCGATGAGGCCGGTCTTGGGGTTCACCTTGTA 12837 Query 127401 CGGCATGCTTTCGAAAAAGAGTGATGTAGCGGACACGTTGCGG 127443 |||||| ||||| |||| || || |||| || |||||| Sbjct 12836 CGGCATCGACTCGAAGAAGATCGAGGTTACGGAGACCTTGCGG 12794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740989633067600