Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_004681.1
Length=75931
Score E
Sequences producing significant alignments: (Bits) Value
seq3919 192 3e-44
>seq3919
Length=626
Score = 192 bits (212), Expect = 3e-44
Identities = 291/412 (71%), Gaps = 19/412 (5%)
Strand=Plus/Plus
Query 66809 GCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGAC 66868
||| | || || || ||||| | || | ||| | | ||||||| || ||| |||| |||
Sbjct 29 GCCCAGGCACAAAAAGCCGGCGCCACCTGCGCATTCGTCGACGCCGAACACGCCCTCGAC 88
Query 66869 CCCGAGTACGCCAAGGC--GCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGG 66926
|||||||||||| ||| ||| || || | ||||| |||| |||| |||||||
Sbjct 89 CCCGAGTACGCC--GGCAAGCTGGGCGTCAATGTCGACGACCTGCTGGTCTCGCAGCCGG 146
Query 66927 ACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGT------CAAGTCTGGCGAGC 66980
|||| || |||||||||||||| ||| ||| | || || ||| | | |||
Sbjct 147 ACACCGGTGAGCAGGCCCTGGAAATCACCGACATGCTGGTGCGCTCCAACGCCGTCGACG 206
Query 66981 TGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCG 67040
|| |||||||| |||| |||||||||||||| || |||||| |||||||||
Sbjct 207 TGATCATCGTCG------ACTCCGTGGCGGCCCTGGTACCCAAGGCCGAGATCGAAGGCG 260
Query 67041 ACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGC 67100
| || || |||| ||||| |||||||| || ||||| ||||| ||||| ||||||||
Sbjct 261 AAATGGGCGACATGCACGTGGGCCTGCAGGCTCGCCTGATGTCCCAGGCACTGCGCAAGA 320
Query 67101 TCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGA 67160
|||| |||| |||| | | ||||| ||| | ||| |||||||| | ||| ||
Sbjct 321 TCACCGGCAACATCAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGATCCGCATGA 380
Query 67161 AGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGC 67212
| |||||| || | | ||||| || |||||||| || || || ||
Sbjct 381 AAATCGGCGTGATGTTCGGCAGCCCG---GAAACCACCACCGGTGGTAACGC 429
Score = 82.4 bits (90), Expect = 4e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 67264 GAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCT 67323
|||||||||||| || | ||||||| | ||||| || ||| |||||||||||||| |
Sbjct 520 GAAGGAAGGCGACGAAGTGGTCGGCAGCGAAACCCGCGTCAAAATCGTCAAGAACAAGGT 579
Query 67324 GGCCCCGCCGCACCGCAACGCCGAGTTC 67351
||| |||||| |||| | |||||||||
Sbjct 580 GGCGCCGCCGTTCCGCCAGGCCGAGTTC 607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242832171992120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |