Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value seq2257 131 3e-25 >seq2257 Length=8409 Score = 131 bits (144), Expect = 3e-25 Identities = 311/462 (67%), Gaps = 10/462 (2%) Strand=Plus/Plus Query 147119 CTTTTATAACGCTGTTTC--AACTCAAAAACTTTCGCTACCTACACCGATTATGGCAGGC 147176 |||||| |||| || || || |||| | |||| | || || || || ||||| ||| Sbjct 5448 CTTTTACGACGCCGTATCGCAATTCAAGA--TTTCCTTGCCCACGCCCATCATGGCTGGC 5505 Query 147177 GTTCGTACCCCGACACGTCAATTTAGCTCGTGTGTGAAAATCGAATCTGGCGACTCGCTG 147236 || || || || || || || || ||||| || ||| ||||||| || |||| ||| Sbjct 5506 GTGCGCACACCCACTCGCCAGTTCAGCTCTTGCGTGCTGATCGAATGTGACGACAGCCTG 5565 Query 147237 CGTTCGATCAA--CAAGGTATCTGAAGCTATCGTTGATTACATTAGTAAACGTGCGGGTA 147294 ||||| | | | | | | || || ||| |||| | | ||||| |||| Sbjct 5566 GACAGCATCAATGCCACG-ACCAGC-GCCATTGTTCGTTACGTGTCACAGCGTGCCGGTA 5623 Query 147295 TTGGCGTAAACGGTGGTGCAATTCGAGCAGAGGGTTCGGTTGTACGTGCGGGTGAAATTC 147354 | || | || ||||| ||||| || | || | | |||| |||||| | Sbjct 5624 TCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGCAGCGAAATTCGTGGTGGTGAAGCAC 5683 Query 147355 GTCACACTGGCGTAATTCCTTTCTGGAAACACTTTCAGACTGCGGTTAAATCGTGTTCTC 147414 ||||| || | || |||| || || ||| ||||||| || || || || | Sbjct 5684 AACACACGGGTTGCCTGCCGTTCTTCAAGATGTTCCAGGCTGCGGTGAAGTCCTGCTCGC 5743 Query 147415 AAGGTGGTGTACGTGGCGGTGCTGCGACTCTGACTTACCCGATCTGGCACTTAGAAGTAG 147474 |||| || || ||||| ||||| || || || ||||| || |||||| | ||||| | Sbjct 5744 AAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTCTACCCCATGTGGCACCTGGAAGTGG 5803 Query 147475 AAAAGCTTCTTGTTCTGAAGAACAACAAAGGTGTTGAAGAGAACCGTATTCGTCATCTTG 147534 ||| || || ||||||||||||||| ||||| ||||| |||||||||||||| | | Sbjct 5804 AAACACTGCTGGTTCTGAAGAACAACCGTGGTGTGGAAGAAAACCGTATTCGTCACTTGG 5863 Query 147535 ACTACAGCGTATCA-ATTAACCGATTGATGATGCAACGCCTG 147575 ||||| | || ||| || ||||| ||| || || |||||| Sbjct 5864 ACTACGGTGT-TCAGATCAACCGCTTGCTGTACCAGCGCCTG 5904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783267263882400