Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_005083.2
Length=244834
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 131 3e-25
>seq2257
Length=8409
Score = 131 bits (144), Expect = 3e-25
Identities = 311/462 (67%), Gaps = 10/462 (2%)
Strand=Plus/Plus
Query 147119 CTTTTATAACGCTGTTTC--AACTCAAAAACTTTCGCTACCTACACCGATTATGGCAGGC 147176
|||||| |||| || || || |||| | |||| | || || || || ||||| |||
Sbjct 5448 CTTTTACGACGCCGTATCGCAATTCAAGA--TTTCCTTGCCCACGCCCATCATGGCTGGC 5505
Query 147177 GTTCGTACCCCGACACGTCAATTTAGCTCGTGTGTGAAAATCGAATCTGGCGACTCGCTG 147236
|| || || || || || || || ||||| || ||| ||||||| || |||| |||
Sbjct 5506 GTGCGCACACCCACTCGCCAGTTCAGCTCTTGCGTGCTGATCGAATGTGACGACAGCCTG 5565
Query 147237 CGTTCGATCAA--CAAGGTATCTGAAGCTATCGTTGATTACATTAGTAAACGTGCGGGTA 147294
||||| | | | | | | || || ||| |||| | | ||||| ||||
Sbjct 5566 GACAGCATCAATGCCACG-ACCAGC-GCCATTGTTCGTTACGTGTCACAGCGTGCCGGTA 5623
Query 147295 TTGGCGTAAACGGTGGTGCAATTCGAGCAGAGGGTTCGGTTGTACGTGCGGGTGAAATTC 147354
| || | || ||||| ||||| || | || | | |||| |||||| |
Sbjct 5624 TCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGCAGCGAAATTCGTGGTGGTGAAGCAC 5683
Query 147355 GTCACACTGGCGTAATTCCTTTCTGGAAACACTTTCAGACTGCGGTTAAATCGTGTTCTC 147414
||||| || | || |||| || || ||| ||||||| || || || || |
Sbjct 5684 AACACACGGGTTGCCTGCCGTTCTTCAAGATGTTCCAGGCTGCGGTGAAGTCCTGCTCGC 5743
Query 147415 AAGGTGGTGTACGTGGCGGTGCTGCGACTCTGACTTACCCGATCTGGCACTTAGAAGTAG 147474
|||| || || ||||| ||||| || || || ||||| || |||||| | ||||| |
Sbjct 5744 AAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTCTACCCCATGTGGCACCTGGAAGTGG 5803
Query 147475 AAAAGCTTCTTGTTCTGAAGAACAACAAAGGTGTTGAAGAGAACCGTATTCGTCATCTTG 147534
||| || || ||||||||||||||| ||||| ||||| |||||||||||||| | |
Sbjct 5804 AAACACTGCTGGTTCTGAAGAACAACCGTGGTGTGGAAGAAAACCGTATTCGTCACTTGG 5863
Query 147535 ACTACAGCGTATCA-ATTAACCGATTGATGATGCAACGCCTG 147575
||||| | || ||| || ||||| ||| || || ||||||
Sbjct 5864 ACTACGGTGT-TCAGATCAACCGCTTGCTGTACCAGCGCCTG 5904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 783267263882400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |