Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq5432 100 1e-16 >seq5432 Length=1936 Score = 100 bits (110), Expect = 1e-16 Identities = 214/313 (68%), Gaps = 14/313 (4%) Strand=Plus/Minus Query 10149 GTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCC--GATCCTGAAGTCCGTTACCTGC 10206 || ||||| || |||||||| || | ||| | |||| || |||||||| || |||||| Sbjct 481 GTTAACAAAGTCATTTTGGTCGGCA-CTT-GCGGCCAGGACCCTGAAGTTCGCCACCTGC 424 Query 10207 CGAGCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGATCGATACAAGGACAAGG 10266 | | |||| ||||||| | ||| || | || || || | ||| | | | |||||| Sbjct 423 CCAACGGCAACGCGGTGACCAACCTCAGCCTGGCCACCAGCGAGCAGTGGACCGACAAGC 364 Query 10267 CGAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTTCTTCGGTCGGCTGG 10326 || |||| | | ||| || || |||||||| || ||| | ||||| | | | Sbjct 363 AGACCGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTTTCGATGTTCGGCAAGGTTG 304 Query 10327 CTGAGATCGTCGACGAGCACCTGCGCAAGGG--CGCATCTGTCTACATCGAGGGGCGCAT 10384 | ||||| | || |||| ||||||||||||| |||| ||| |||||||||| | Sbjct 303 CCGAGATTGCCGGCGAGTACCTGCGCAAGGGTTCGCAGGTGT--ACATCGAGGGCAAGCT 246 Query 10385 CAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGTTACACGACCGAGATCGTCGC 10444 |||| || |||| ||| | |||| | |||||||| ||||||||| ||| Sbjct 245 GCAGACCCGCGAGTG---GGAAAAGGACGGCATCAAGCGTTACACCACCGAGATCATCGT 189 Query 10445 TGACCGCATGCAG 10457 || ||||||| Sbjct 188 CGA---CATGCAG 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204278901023730