Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_005262.3
Length=63882
Score E
Sequences producing significant alignments: (Bits) Value
seq5432 100 1e-16
>seq5432
Length=1936
Score = 100 bits (110), Expect = 1e-16
Identities = 214/313 (68%), Gaps = 14/313 (4%)
Strand=Plus/Minus
Query 10149 GTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCC--GATCCTGAAGTCCGTTACCTGC 10206
|| ||||| || |||||||| || | ||| | |||| || |||||||| || ||||||
Sbjct 481 GTTAACAAAGTCATTTTGGTCGGCA-CTT-GCGGCCAGGACCCTGAAGTTCGCCACCTGC 424
Query 10207 CGAGCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGATCGATACAAGGACAAGG 10266
| | |||| ||||||| | ||| || | || || || | ||| | | | ||||||
Sbjct 423 CCAACGGCAACGCGGTGACCAACCTCAGCCTGGCCACCAGCGAGCAGTGGACCGACAAGC 364
Query 10267 CGAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTTCTTCGGTCGGCTGG 10326
|| |||| | | ||| || || |||||||| || ||| | ||||| | | |
Sbjct 363 AGACCGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTTTCGATGTTCGGCAAGGTTG 304
Query 10327 CTGAGATCGTCGACGAGCACCTGCGCAAGGG--CGCATCTGTCTACATCGAGGGGCGCAT 10384
| ||||| | || |||| ||||||||||||| |||| ||| |||||||||| |
Sbjct 303 CCGAGATTGCCGGCGAGTACCTGCGCAAGGGTTCGCAGGTGT--ACATCGAGGGCAAGCT 246
Query 10385 CAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGTTACACGACCGAGATCGTCGC 10444
|||| || |||| ||| | |||| | |||||||| ||||||||| |||
Sbjct 245 GCAGACCCGCGAGTG---GGAAAAGGACGGCATCAAGCGTTACACCACCGAGATCATCGT 189
Query 10445 TGACCGCATGCAG 10457
|| |||||||
Sbjct 188 CGA---CATGCAG 179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 204278901023730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |