Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_005344.1
Length=39043
Score E
Sequences producing significant alignments: (Bits) Value
seq5893 91.5 4e-14
>seq5893
Length=2160
Score = 91.5 bits (100), Expect = 4e-14
Identities = 205/304 (67%), Gaps = 8/304 (3%)
Strand=Plus/Plus
Query 33101 TTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAAC 33160
|||||||||||||| || || |||||||| ||||| | || |||| ||||||| | |
Sbjct 417 TTATCCCAGCAGTTGCCTCGGCGGCTCATGCTCTGGCGCATGCGGTAGCGCCACAGTCTC 476
Query 33161 TGCCGGAACTGCCTGCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCG 33220
|| |||||||| | || ||| || ||||| ||| ||| |||| || |||
Sbjct 477 TGGCGGAACTGACGACTGCCATATTGCGATCCCTGGTCGGAGTGAAACAGCAGCCCTTGA 536
Query 33221 GGCTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGA-GCCTGCTGTCCGG 33279
||||| ||||| ||| | |||| ||||||||||| | || | |||| || |||
Sbjct 537 GGCTTTCCACGTTGTTCGTAAGCCACGTCCAGCGCTTTGACCACGAGGTCTGC-GTTCGG 595
Query 33280 CGAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAG 33339
| || | ||||||||||| | | | ||| | || || || ||||| || ||
Sbjct 596 CTTTTCTGATAAAGCCCAGCCCACCACTCTGCGTGCATAGAGATCCAGGACAACTGCCAG 655
Query 33340 GTACGCCCAGCGCTTACCC---GTCCAGATATAGGTCACATCACCGCACCACACCTGATT 33396
|| ||| || ||| | ||| | || || | || || ||||| ||||||||
Sbjct 656 ATAGTGCCA---TTTGCCCTGTGCCCAAACGTAAGTGATGTCGCCACACCAGACCTGATT 712
Query 33397 TGGC 33400
||||
Sbjct 713 TGGC 716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124804868753100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |