Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq5893 91.5 4e-14 >seq5893 Length=2160 Score = 91.5 bits (100), Expect = 4e-14 Identities = 205/304 (67%), Gaps = 8/304 (3%) Strand=Plus/Plus Query 33101 TTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAAC 33160 |||||||||||||| || || |||||||| ||||| | || |||| ||||||| | | Sbjct 417 TTATCCCAGCAGTTGCCTCGGCGGCTCATGCTCTGGCGCATGCGGTAGCGCCACAGTCTC 476 Query 33161 TGCCGGAACTGCCTGCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCG 33220 || |||||||| | || ||| || ||||| ||| ||| |||| || ||| Sbjct 477 TGGCGGAACTGACGACTGCCATATTGCGATCCCTGGTCGGAGTGAAACAGCAGCCCTTGA 536 Query 33221 GGCTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGA-GCCTGCTGTCCGG 33279 ||||| ||||| ||| | |||| ||||||||||| | || | |||| || ||| Sbjct 537 GGCTTTCCACGTTGTTCGTAAGCCACGTCCAGCGCTTTGACCACGAGGTCTGC-GTTCGG 595 Query 33280 CGAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAG 33339 | || | ||||||||||| | | | ||| | || || || ||||| || || Sbjct 596 CTTTTCTGATAAAGCCCAGCCCACCACTCTGCGTGCATAGAGATCCAGGACAACTGCCAG 655 Query 33340 GTACGCCCAGCGCTTACCC---GTCCAGATATAGGTCACATCACCGCACCACACCTGATT 33396 || ||| || ||| | ||| | || || | || || ||||| |||||||| Sbjct 656 ATAGTGCCA---TTTGCCCTGTGCCCAAACGTAAGTGATGTCGCCACACCAGACCTGATT 712 Query 33397 TGGC 33400 |||| Sbjct 713 TGGC 716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124804868753100