Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq4924 111 1e-19 >seq4924 Length=20857 Score = 111 bits (122), Expect = 1e-19 Identities = 130/174 (75%), Gaps = 5/174 (3%) Strand=Plus/Minus Query 25470 TGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAG 25529 ||||||||||| || | || || || || | || ||||||| ||||||||| Sbjct 509 TGGACAAACTCACC----TTTAAGCCAGTCACATGCGCGATCATGTGAGTGAGGAGACCA 454 Query 25530 TAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTG 25589 |||||||||||||| ||||| || || | |||| || || || | |||||| || || Sbjct 453 TAGCTGGCGATGTTGAAGGGCACTCCAAGGGCCATATCGCCG-GAACGCTGGTATAGTTG 395 Query 25590 ACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGGTGTAGCACGGAGG 25643 |||||| || || ||||||| || || |||||||||||||| | |||||| || Sbjct 394 ACACGACAGTTCCCCGTCGCTTACATAGAACTGACACATGGTATGGCACGGTGG 341 Score = 84.2 bits (92), Expect = 1e-11 Identities = 116/161 (72%), Gaps = 5/161 (3%) Strand=Plus/Minus Query 25472 GACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTA 25531 ||||||||| || | || || || || | || ||||||| || || ||| || Sbjct 728 GACAAACTCACC----TTTAAGCCAGTCACATGTGCTATCATGTGGGTTAGAAGACCATA 673 Query 25532 GCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGAC 25591 |||||| ||||| ||||| || || | |||| || || || | |||||| | ||| | Sbjct 672 GCTGGCTATGTTGAAGGGCACTCCAAGGGCCATATCGCCG-GAACGCTGGTACAACTGGC 614 Query 25592 ACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGGTG 25632 |||| || || | ||||| ||||| ||||||||||||||| Sbjct 613 ACGACAGTTCGCCATCGCTGACGTAGAACTGACACATGGTG 573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340106467843230