Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq4924 111 1e-19
>seq4924
Length=20857
Score = 111 bits (122), Expect = 1e-19
Identities = 130/174 (75%), Gaps = 5/174 (3%)
Strand=Plus/Minus
Query 25470 TGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAG 25529
||||||||||| || | || || || || | || ||||||| |||||||||
Sbjct 509 TGGACAAACTCACC----TTTAAGCCAGTCACATGCGCGATCATGTGAGTGAGGAGACCA 454
Query 25530 TAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTG 25589
|||||||||||||| ||||| || || | |||| || || || | |||||| || ||
Sbjct 453 TAGCTGGCGATGTTGAAGGGCACTCCAAGGGCCATATCGCCG-GAACGCTGGTATAGTTG 395
Query 25590 ACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGGTGTAGCACGGAGG 25643
|||||| || || ||||||| || || |||||||||||||| | |||||| ||
Sbjct 394 ACACGACAGTTCCCCGTCGCTTACATAGAACTGACACATGGTATGGCACGGTGG 341
Score = 84.2 bits (92), Expect = 1e-11
Identities = 116/161 (72%), Gaps = 5/161 (3%)
Strand=Plus/Minus
Query 25472 GACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTA 25531
||||||||| || | || || || || | || ||||||| || || ||| ||
Sbjct 728 GACAAACTCACC----TTTAAGCCAGTCACATGTGCTATCATGTGGGTTAGAAGACCATA 673
Query 25532 GCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGAC 25591
|||||| ||||| ||||| || || | |||| || || || | |||||| | ||| |
Sbjct 672 GCTGGCTATGTTGAAGGGCACTCCAAGGGCCATATCGCCG-GAACGCTGGTACAACTGGC 614
Query 25592 ACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGGTG 25632
|||| || || | ||||| ||||| |||||||||||||||
Sbjct 613 ACGACAGTTCGCCATCGCTGACGTAGAACTGACACATGGTG 573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340106467843230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |