Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq4015 188 4e-43 seq5207 104 1e-17 >seq4015 Length=3327 Score = 188 bits (208), Expect = 4e-43 Identities = 262/363 (72%), Gaps = 7/363 (2%) Strand=Plus/Minus Query 72269 CTACCTGCAACTTATGCGCGTCCCCGAGCTGCAA----GATAACCGAACGCTGGAAATTG 72324 |||||||||||| |||| |||| | ||| || || ||||| || || ||| Sbjct 1479 CTACCTGCAACTGATGCAGATCCCGG-GCTCCAGCGGTGACAACCGTACCAACGAGATTT 1421 Query 72325 CCGAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAAGTACC-GGTGGTGGCA 72383 ||||||| || ||||| || ||||| |||| |||||||| ||| | || ||| | || Sbjct 1420 CCGAGATCTCGCGCTCGCTCAAGGCCCTGGCCAAGGAATT-CAACTGCCCGGTCATCGCC 1362 Query 72384 TTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGACCGGTAAATTCAGAT 72443 |||| || || || || || || || ||||| | |||| || ||||| || || || Sbjct 1361 CTGTCGCAGCTCAACCGCTCCCTCGAGCAGCGCCCCAACAAGCGCCCGGTGAACTCCGAC 1302 Query 72444 TTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTTTCTGTATCGCGAC 72503 || |||||||| || || || ||||||||||| ||| |||| ||||| |||| |||||| Sbjct 1301 TTGCGTGAATCGGGTGCGATCGAGCAGGACGCCGACGTGATCATGTTCGTGTACCGCGAC 1242 Query 72504 GAAGTTTATCACCCGGATAGCGAAATGAAGGGCATTGCCGAGGTAATTATCGGAAAGCAA 72563 || || || ||||| || | ||| |||||||| |||||| | || ||||| ||||| Sbjct 1241 GAGGTGTACCACCCCGAGACCGAGCACAAGGGCATCGCCGAGATCATCATCGGCAAGCAG 1182 Query 72564 CGAAATGGCCCAATTGGCACGGTGAGATTGGCTTTTAACGGCCAATACTCACGGTTTGAT 72623 || || ||||| || ||| ||| | |||| || | |||| | ||| | || || || Sbjct 1181 CGTAACGGCCCCATCGGCTTCGTGCGCCTGGCGTTCATCGGCAAGTACACGCGCTTCGAG 1122 Query 72624 AAC 72626 ||| Sbjct 1121 AAC 1119 >seq5207 Length=1439 Score = 104 bits (114), Expect = 1e-17 Identities = 150/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 8110 GTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATT 8169 ||| || || ||||| ||| | | ||||| || |||||||| || | | || | Sbjct 808 GTAACCCGCGTCGGCGCCGACCATGTTTTCCTCGCCGTGCAGCAGTTTGTCGACTTGGGT 867 Query 8170 GAGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATC 8229 || || | | |||||||| ||| |||| |||||| ||| || ||| |||| Sbjct 868 GATATCCGCCACATTGGCCGCCGTGCCCACCACGCTGTGCACCAGACCCGACTTATCATC 927 Query 8230 GACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCAT 8289 |||||| ||||| ||||||||||| |||| |||| || || ||||||||||| ||||| Sbjct 928 GACACCGATGTGCGCCTTCATGCCGAAGTAGTACTGGTTACCCTTCTTGGTCTGGTGCAT 987 Query 8290 CTCCGGATCGCG-TTGCTGCTCTTTGTTC 8317 || || ||||| |||| | || |||||| Sbjct 988 TTCTGGGTCGCGTTTGCCG-TCCTTGTTC 1015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303207445450710