Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq4834 118 1e-21
seq5063 105 6e-18
seq7237 87.8 2e-12
>seq4834
Length=88581
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| || || || || | || |||||||| || |||||||| |||
Sbjct 22318 CCGCCACGAAGACGGAGAACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAT 22377
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || ||| |||| | || |||||||||||||||
Sbjct 22378 AACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGAGGG 22437
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || || ||| ||| | | ||| | |||||| | || ||||
Sbjct 22438 ATGCCTTCCTTATCTTGAATCTTCGCCTTCACGTTCTCGATAGTATCCGAGGCTTCGACT 22497
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | ||| | || || ||||| || || || ||||| |||||||||
Sbjct 22498 TCAAGGGTGATTGTCTTCCCGGTAAGCGTCTTCACGAAGATCTGCATG 22545
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || || || | || |||||||| ||||||||||| ||
Sbjct 21113 CCACCACGAAGACGGAGGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGAA 21172
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| ||||| || || || |||| | ||||| ||||| ||||||
Sbjct 21173 AGAGTACGGCCGTCCTCAAGCTGTTTTCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGG 21232
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || || ||| ||| | | ||| | || || | | ||||
Sbjct 21233 ATGCCTTCCTTATCTTGAATCTTCGCCTTCACGTTCTCGATTGTGTCCGAAGCTTCGACT 21292
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | ||| || ||||| || || || || || || ||||||
Sbjct 21293 TCGAGGGTGATGGTCTTTCCGGTGAGCGTCTTGACAAAGATTTGCATG 21340
Score = 89.7 bits (98), Expect = 5e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 131090 GCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTT 131149
|||| || ||| |||| | ||||||||||| |||||||| ||||| ||||| || |
Sbjct 22922 GCTTACCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCT 22981
Query 131150 TCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGG 131209
| ||||| | || | || |||| | ||| | || | ||| | ||| || ||||
Sbjct 22982 TAGCCTTGACGTTTTCGATGGTGTCGGACGCCTCAACCTCAAGGGTGATGGTCTTTCCGG 23041
Query 131210 TTAGAGTTTTTACGAAAATCTGCATGACTTAT 131241
| |||||||| ||||| |||||||||||| ||
Sbjct 23042 TAAGAGTTTTGACGAAGATCTGCATGACTGAT 23073
Score = 84.2 bits (92), Expect = 2e-11
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || ||||| | || |||||||| || |||||||| ||| |
Sbjct 21705 CCACCACGAAGACGGAGTACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 21764
Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || | || | || || |||||||| || ||| | || | ||||||||||| |||||
Sbjct 21765 AAAGTTCTGCCA-TCTTCAAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCAGGAGG 21823
Query 131127 GATTCCTTCTTTGTC 131141
||| ||||| || ||
Sbjct 21824 GATGCCTTCCTTATC 21838
>seq5063
Length=4177
Score = 105 bits (116), Expect = 6e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078
||| || || | || | ||| |||||||| || |||||||| ||| | |||||
Sbjct 2222 ACGAAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCC 2281
Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138
||||| || ||||| || ||| |||| || ||||| || || || || |||||||||||
Sbjct 2282 ATCCTCGAGTTGCTTTCCGGCGAAGATCAAGCGCTGTTGATCTGGGGGAATTCCTTCTTT 2341
Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198
||| ||| || ||||| | ||| | || |||| || |||| |||| ||| |
Sbjct 2342 GTCCTGGATCTTGGCCTTGACGTTCTCGATCGTGTCGGAGGCTTCGACTTCGAGGGTGAT 2401
Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || ||||| ||||| || || || || |||||
Sbjct 2402 CGTCTTGCCGGTGAGAGTCTTCACAAAGATTTGCAT 2437
Score = 89.7 bits (98), Expect = 5e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || | || | || |||||||| || |||||||| |||
Sbjct 1668 CCACCGCGGAGACGGAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1727
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||| || ||||||||||| || |||| | |||||||| || || |||
Sbjct 1728 AGAGTGCGCCCGTCTTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGTGGG 1787
Query 131128 ATTCCTTCTTTGTC 131141
||||| || |||||
Sbjct 1788 ATTCCCTCCTTGTC 1801
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | || || || || || | ||| |||||||| || |||||||| ||
Sbjct 3154 CCACCGCGGAGTCGGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 3213
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||| || |||||||| || || |||| | || |||||||| || |||
Sbjct 3214 AGGGTACGTCCGTCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGTTGCTGGTCTGGGGGG 3273
Query 131128 ATTCCTTCTTTGTC 131141
|||||||| |||||
Sbjct 3274 ATTCCTTCCTTGTC 3287
>seq7237
Length=102105
Score = 87.8 bits (96), Expect = 2e-12
Identities = 434/694 (63%), Gaps = 63/694 (9%)
Strand=Plus/Plus
Query 145898 AGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCC 145957
|| || || ||||||| |||||||| || ||||| | || | | ||||| ||||||
Sbjct 85641 AGTCCAGGGCACTTGTGCGGACACATGAGGGACCACTCCTTGTCGTCCTTGACACGCTCC 85700
Query 145958 ATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCG--CGCTTTGCAATCCTCAG 146015
|| ||||| || || | ||| ||| |||| | | ||||| ||| | | ||||| |
Sbjct 85701 ATGAACAAGTCGGGGATCCAGAGCCCGTAGAAGAGATCGCGAGCGCGCTCC--TCCTCCG 85758
Query 146016 CACCCATGTTTCGCTTCAAATTAAGCACACTATA-GATGTCCGCGTGCCACGGTTCAATA 146074
|| |||| | ||||| | || | ||| | ||||||||||||||| || || ||
Sbjct 85759 ATCCGGTGTTCCTCTTCAGACGCAGGA-ACTCGAAGATGTCCGCGTGCCATGGCTCGATG 85817
Query 146075 TAGACGGCGAGGGCTCC---------------TT------------TTCGT--------- 146098
|||| ||||| |||||| || ||||
Sbjct 85818 TAGATGGCGAAGGCTCCAGGACGCTGGAAACATTCAAGAATAAGAACTCGTCAAGGCACC 85877
Query 146099 -------------TTGCCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCAC 146145
|| || || ||||| |||| || | ||||||| |||| ||||
Sbjct 85878 AAATCCTACCTTGTTTCCTCCTTGGTCGACGTAGCGAGCGGTGTTGTTGTAGACCCGCAG 85937
Query 146146 CATGGGCTCGACGCCGCTGGCTACGCCGTTCGT---AGAGTTTATTCTGGTGCCGCGGGA 146202
||| || || ||| ||| |||||| || || | || || ||| ||
Sbjct 85938 CATAGGAATGAGTCCGTTGGAGGTGCCGTTGGTCCCAGCG---ATGAGAGTTCCGGAGGC 85994
Query 146203 GCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTC 146262
|| | ||| || ||||| | ||||| |||||| || ||||||| || ||||| |
Sbjct 85995 TCGAATGCAGTGGACATTGAGGCCGATTCCGCCGGCGGACTTGGAGATCAGAGCGCACTG 86054
Query 146263 GCCGAGCGTCTCGTAGATGCCGTCAATGCTATCGCTTCGAATGCCGAGCAGAAAGCACGA 146322
| ||| |||| | |||||||||| ||| ||| | ||| |||||| ||||| ||
Sbjct 86055 CCAGAGGGTCTTGAAGATGCCGTCGATGGAGTCGTCACTCATGGTGAGCAGGAAGCAGGA 86114
Query 146323 GCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGT-AAACA 146381
|| |||||| | | | || || || ||| | |||||| || || || || ||
Sbjct 86115 GCTCATCTGGGGCTTGCAGGTGCCGGCGTTGAAGAGCGTCGGCGAGGCATGGGTGAACCA 86174
Query 146382 TTTTTCGGCTCATCATCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGC 146441
|||| ||| | || |||||||| ||| | | ||||| || || || |
Sbjct 86175 CCGCTCGG-ACATGAGGTTGTAGGTTTCGATGGCGGCGTTGATGTCTTCCTTGTGGATTC 86233
Query 146442 CCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCCGCCACTTGATTGTCAATCTTTA 146501
| | || |||||||| ||||| |||||||| || ||| | || | ||| ||||| |
Sbjct 86234 CGACGGCCACGCGCATCAGCATATGTTGGGGTCGTTCCACGACCTTCCCGTCGATCTTGA 86293
Query 146502 ACAAATAGCCGTTCTCCAGGGTTTTGTATCCGAA 146535
| ||| | ||||||||| ||| | |||||
Sbjct 86294 GGAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAA 86327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471968489798400
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