Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_008348.1
Length=168041
Score E
Sequences producing significant alignments: (Bits) Value
seq1762 87.8 2e-12
seq1153 84.2 2e-11
>seq1762
Length=12899
Score = 87.8 bits (96), Expect = 2e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 66178 GTGCAACAACAACGGGCTCAACCATGCCGTCCTGTTGGTCGGGTTCGGCATCGAGTTCGA 66237
||||||| | | | || | |||| |||||||| | ||||| |||||| |||| ||
Sbjct 415 GTGCAACCCCGAGGAGCCCGACCACGCCGTCCTCCTCGTCGGCTTCGGCGCCGAGGCCGG 474
Query 66238 CACGCCCTACTGGATCCTCAAGAACAGCTGGGGCAACGATTGGGGCGAAAAGGGCTATTT 66297
| |||| ||||||| ||||||||||||||||| ||| |||||||| ||||| ||
Sbjct 475 CGTCCCCTTCTGGATCGTCAAGAACAGCTGGGGCGCCGACTGGGGCGAGGCCGGCTACTT 534
Query 66298 CCG 66300
|||
Sbjct 535 CCG 537
>seq1153
Length=143934
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 66193 GCTCAACCATGCCGTCCTGTTGGTCGGGTTCGGCATCGAGTTCGACACGCCCTACTGGAT 66252
||| ||||| | ||| || | ||||| | ||| ||||| | | | ||||| ||||||
Sbjct 108034 GCTGAACCACGGCGTGCTCATCGTCGGCTATGGCGTCGAGGGCAAGAAGCCCTTCTGGAT 107975
Query 66253 CCTCAAGAACAGCTGGGGCAACGATTGGGGCGAAAAGGGCTATTTCCGACT 66303
| ||||||||||||||||| | | ||||||||| ||||||| | |||||
Sbjct 107974 CATCAAGAACAGCTGGGGCCCCAAGTGGGGCGAACAGGGCTACTATCGACT 107924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537552732499600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |