Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq7237 385 9e-102 seq2592 224 2e-53 >seq7237 Length=102105 Score = 385 bits (426), Expect = 9e-102 Identities = 1209/1863 (65%), Gaps = 161/1863 (9%) Strand=Plus/Plus Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG 243933 || ||||||||||||| ||| |||| ||||| | || || |||||||| ||||| Sbjct 84520 GATGTTGAGGGACTGGGACTGATCGATGAAGGCTCCTCGGTCCGCGGCCATCTCGATGAT 84579 Query 243934 GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCC 243993 ||||||||| || ||||| | | |||||||||| | || || | || ||||| | Sbjct 84580 GTCCTTCTGCGAGATCTCCCAAACGGTCTTGTAGAGGTCCTGCAGCTCCTTGGGGATCGA 84639 Query 243994 TTCGATGTTCTGCACCGAGCC-CT-TGTGGACGATGAGCTGGGTGCGCATGTTATCGTTC 244051 ||||||||||| | ||| || || |||| | || | || | | || || |||| | Sbjct 84640 ATCGATGTTCTGGATCGATCCACTCTGTGAA--ATTATCTTGTTCTTCAGATTGTCGTCC 84697 Query 244052 CACAGGCCCAAGCGCTCCA---GCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCT 244108 || ||| ||||||| | ||| | || || ||||| | ||| || || Sbjct 84698 CATAGGTTT---CGCTCCACGAGGTCCTTCAGTAGATGAGGATTCACGATCTGGAAGTCG 84754 Query 244109 CCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTG 244168 || || ||||||||||| ||||| ||| || |||||| || ||| |||| Sbjct 84755 CCAGAGAGCACGCGGCGACTGTAGATGTTCGACGTGTACGGCTCCATCGACTCGTTGTTT 84814 Query 244169 CCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACG 244228 || || |||||||| || || || |||||||||| |||||| |||||||||| ||| Sbjct 84815 CCTAGGATCTGCGCTGTCGATGCCGTTGGCATGGGCGCCACCAGGAGACTGTTCCGTACG 84874 Query 244229 CCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTC- 244287 |||||| || ||| |||| || |||||||||| | | | | | | | Sbjct 84875 CCGTGCTTCGCGATCTTCTCCTTGAGTGCGGCCCAGTCCCACTGGTCGGTGGGCACGACC 84934 Query 244288 -GCGTTTGA-----GGCC--CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTG 244339 || || | || | |||||| || ||||||| | || | ||| || || Sbjct 84935 GGCTTTCCATCCTCGGTCTTCCACATCTCGTACTGCAGGATTCCTTGGCTCACTGGCGAT 84994 Query 244340 CCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCG 244399 || || |||||| ||||| ||||| ||| ||||||| || | || ||||| Sbjct 84995 CCTTCATAGGTCTCGTAGGTACCGTGCTGCTCCGCCAGCTCGCAAGAGGCTTCCAGGGCC 85054 Query 244400 GCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAG 244459 |||| ||||||||||||||||||| | |||||||| |||||| | | | ||||||| Sbjct 85055 GCGTGGTAGATGGTCTCGAAGATCCTTCGGTTCATGTTGCGGGCTTCGGGACTGGTGAAG 85114 Query 244460 GGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTG 244519 ||| || ||| | ||||||| |||| |||| ||||| || ||||| || || || | Sbjct 85115 GGGTAGCGCATGAGCATGAAGGCGTCCGCCAAGCCCTGGACTCCGATTCCAATCGGCCGA 85174 Query 244520 TGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTG 244579 || | |||||||||| | ||| |||||||| ||||| |||| ||||||| | |||| Sbjct 85175 TGCCTCTTGTTGGAGGTCTCGGCCTCGGGCACAGGGTAGTAGTTCGCGTCGATGATCTTG 85234 Query 244580 TTGAGGTTGCGGGTGAT--CATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGT 244637 || ||||| | ||||| | | || || ||| | |||| |||| || Sbjct 85235 TTCAGGTTCCTCGTGATGACCTTCG--TGATCTCG---TGGAGCT---TCGCGTAGTCAA 85286 Query 244638 AGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGC 244697 | | | ||| || || || || ||| ||||||||| ||||||||||| Sbjct 85287 AAGTCTTCTCCTCGGTG---------ACGAAGCGGTTCAGGGCGACGGAGGCCAGGTTGC 85337 Query 244698 AGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACT 244757 | ||||| || || || | | ||||||||| ||||||||||||||||| ||||| Sbjct 85338 ACACGGCTACTTCTTCAGGCGAAGAGTACTGGACGATCTCGGTGCAGAGGTTGGAGCACT 85397 Query 244758 TGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGA 244817 |||| || || |||| || || |||||||| ||||||||||||||||||||||||| Sbjct 85398 TGATCGTCCCGAGGTTCTTCTGGTTGGACTTCTGGTTGCAGGCGTCCTTGTAGAGCATGT 85457 Query 244818 AGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCT---GTTCCAGAGGTCCCTAGCCT 244874 | || ||||| |||| || |||||| |||| | | ||| ||| | | |||| Sbjct 85458 AAGGAGTGCCGGTTTCGATCT--GCGACG-TGACGATCTCCTCCCAAAGGGCGCGGGCCT 85514 Query 244875 TGAC-CG-TCCTGCGAGCCTTGCCCTCTGCCTCGTAGC--------GG------------ 244912 | || || | || ||| | || ||||||||||| | || Sbjct 85515 TCACGCGCTTCTTGTAGCGT--CCTTCTGCCTCGTATCTTAAAGATGGAAGTAAGAGCTT 85572 Query 244913 -----------------------------GTGTACAGGGCCTCGAACTCGGGGCCCCAGA 244943 ||||| || || |||||||| || || Sbjct 85573 CTTGTAGAATTTCTGTATTGACTTACTTCGTGTAAAGTGCTTCGAACTCCTTTCCGTAGG 85632 Query 244944 CCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGA 245003 | |||| || || |||||| ||| |||||||| |||||| | ||||||||| Sbjct 85633 CGTCGTGGAGTCCAGGGCACTTGTGCGGACACATGAGGGACCACTCCTTGTCGTCCTTGA 85692 Query 245004 CCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCT 245063 | | || |||||| | ||||||||||||||| | | |||||| || | | | || || Sbjct 85693 CACGCTCCATGAACAAGTCGGGGATCCAGAGCCCGTAGAAGAGATCGCGAGCGCGCTCCT 85752 Query 245064 CGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCT 245123 | ||||| || |||||| || |||| || || || |||| ||| ||||||| |||| Sbjct 85753 CCTCCGATCCGGTGTTCCTCTTCAGACGCAGGAACTCGAAGATGTCCGCGTGCCATGGCT 85812 Query 245124 CCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC-----------CTGGTC--- 245169 | ||||||| |||| ||| || || |||| | | | | || ||| Sbjct 85813 CGATGTAGATGGCGAAGGCTCCAGGACGCTGGAAACATTCAAGAATAAGAACTCGTCAAG 85872 Query 245170 -CACCA--------------TCCTC-----TCG----AGCG--------CGTTGAAGATG 245197 ||||| ||||| ||| |||| |||| ||| Sbjct 85873 GCACCAAATCCTACCTTGTTTCCTCCTTGGTCGACGTAGCGAGCGGTGTTGTTGTAGACC 85932 Query 245198 CGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTG 245257 ||||| |||| | | ||||| ||| ||||||||| || |||| | || | Sbjct 85933 CGCAGCATAGGAATGAGTCCGTTGGAGGTGCCGTTGGTCCCAGCGATGAGAGTTCCGGAG 85992 Query 245258 CCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGC 245313 | | | ||| | ||||||| ||| | |||||||||| ||||||||| || || Sbjct 85993 GCTC---GAATGCAG-TGGACATTGAGGCCGATTCCGCCGGCGGACTTGGAGATCAGAGC 86048 Query 245314 GCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAA 245373 ||| | || ||| | ||||| || ||| ||| ||||| ||||||| || Sbjct 86049 GCACTGCCAGAGGGTCTTGAAGATGCCGTCGATGGAGTCGTCACTCATGGTGAGCAGGAA 86108 Query 245374 GCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGT 245433 ||||||| || |||||||||| | ||| | |||||| || || || ||| ||||| Sbjct 86109 GCAGGAGCTCATCTGGGGCTTGCAGGTGCCGGCGTTGAAGAGCGTCGGCGAGGCATGGGT 86168 Query 245434 AAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGT 245492 || | | |||| || | || ||| || | || |||| ||||| || || Sbjct 86169 GAACCA-CCGCTCGGACATGAGGTTGTAGGTTTCGATGGCGGCGTTGATGTCTTCCTTGT 86227 Query 245493 GGATCTGCAGGGCGCAC-CTCATGAGGGTGTGCTGGGG-CGTCTCGATGGGTCCCTCGGG 245550 |||| | ||| ||| | ||| || | || ||||| ||| || | | || || | Sbjct 86228 GGATTCCGACGGC-CACGCGCATCAGCATATGTTGGGGTCGT-TCCA--CGACCTTCCCG 86283 Query 245551 TC--CCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAG 245608 || |||||| | |||||||||||| || |||||||| || ||||| | |||| ||| Sbjct 86284 TCGATCTTGAGGAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAAGTAGGTGTAGTTGAAG 86343 Query 245609 TCG 245611 ||| Sbjct 86344 TCG 86346 >seq2592 Length=18905 Score = 224 bits (248), Expect = 2e-53 Identities = 324/454 (71%), Gaps = 5/454 (1%) Strand=Plus/Minus Query 42578 GTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTG 42637 |||| || ||| ||| || || ||| ||| ||||| ||||| | | | || || Sbjct 15323 GTACGTCACGGACCCCCGGGAACGGAACACGCTCTTCAACGCCATACAAGAGTTCCCGTG 15264 Query 42638 CATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCG 42696 ||||||||||||||| |||||||| || |||||||| | | | || ||| | |||| Sbjct 15263 CATCAAGAAGAAGGCCGACTGGGCACTGCGCTGGATCG-GCGACAAGAACGCCTCCTTCG 15205 Query 42697 GCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCT 42756 | | || | ||||| ||||||| || |||||||||||||| || |||||||| Sbjct 15204 GAACCCGCGTGATCGCCTTCGCCGCCGTGGAAGGCATCTTCTTCTCCGGATCCTTCGCCG 15145 Query 42757 CCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCA 42816 ||||||||||||||||| || | ||||||||| |||||| | |||||||||| Sbjct 15144 CCATCTTCTGGCTCAAGAAGCGCGGCCTGATGCCCGGCCTCACCCACAGCAACGAACTCA 15085 Query 42817 TCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCA 42876 || | ||||||| || || || | ||||| ||||||||| ||| | | |||| Sbjct 15084 TCTCCCGGGACGAAGGCCTCCACCGCGACTTCGCCTGCCTCATGTAC---AAGTACCTGG 15028 Query 42877 GGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGA 42936 | ||||||| || ||| |||| | |||||| |||||||| |||||||| Sbjct 15027 AGAGCAAGCCCAGCCAGAAGCAGGTCAACGAGATCATCCGCGAGGCCGTCCAGATCGAGC 14968 Query 42937 AGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGT 42996 |||||| ||| || | | || |||||| | || ||||||||||| | ||| |||| Sbjct 14967 AGGAGTACCTGACAGAAGCCCTACCCGTGGACATGATCGGCATGAACTGCCGCCTAATGT 14908 Query 42997 GCAAGTACATCCAGTACGTCGCCGACCATCTCCT 43030 | ||||||| ||||||| |||||||| || || Sbjct 14907 CCCAGTACATAGAGTACGTGGCCGACCACCTACT 14874 Score = 96.9 bits (106), Expect = 7e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 |||||||||||| ||||||||||||||| | ||||| ||||| ||||| ||||||||||| Sbjct 14788 CCCCTTCGACTTCATGGAGAACATCTCGATAGAGGGGAAGACGAACTTCTTCGAGAAGCG 14729 Query 43130 CGTCGCCGACTACCAG 43145 ||| |||| |||||| Sbjct 14728 GGTCTCCGAGTACCAG 14713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944250550157600