Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq7237 385 9e-102
seq2592 224 2e-53
>seq7237
Length=102105
Score = 385 bits (426), Expect = 9e-102
Identities = 1209/1863 (65%), Gaps = 161/1863 (9%)
Strand=Plus/Plus
Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG 243933
|| ||||||||||||| ||| |||| ||||| | || || |||||||| |||||
Sbjct 84520 GATGTTGAGGGACTGGGACTGATCGATGAAGGCTCCTCGGTCCGCGGCCATCTCGATGAT 84579
Query 243934 GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCC 243993
||||||||| || ||||| | | |||||||||| | || || | || ||||| |
Sbjct 84580 GTCCTTCTGCGAGATCTCCCAAACGGTCTTGTAGAGGTCCTGCAGCTCCTTGGGGATCGA 84639
Query 243994 TTCGATGTTCTGCACCGAGCC-CT-TGTGGACGATGAGCTGGGTGCGCATGTTATCGTTC 244051
||||||||||| | ||| || || |||| | || | || | | || || |||| |
Sbjct 84640 ATCGATGTTCTGGATCGATCCACTCTGTGAA--ATTATCTTGTTCTTCAGATTGTCGTCC 84697
Query 244052 CACAGGCCCAAGCGCTCCA---GCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCT 244108
|| ||| ||||||| | ||| | || || ||||| | ||| || ||
Sbjct 84698 CATAGGTTT---CGCTCCACGAGGTCCTTCAGTAGATGAGGATTCACGATCTGGAAGTCG 84754
Query 244109 CCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTG 244168
|| || ||||||||||| ||||| ||| || |||||| || ||| ||||
Sbjct 84755 CCAGAGAGCACGCGGCGACTGTAGATGTTCGACGTGTACGGCTCCATCGACTCGTTGTTT 84814
Query 244169 CCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACG 244228
|| || |||||||| || || || |||||||||| |||||| |||||||||| |||
Sbjct 84815 CCTAGGATCTGCGCTGTCGATGCCGTTGGCATGGGCGCCACCAGGAGACTGTTCCGTACG 84874
Query 244229 CCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTC- 244287
|||||| || ||| |||| || |||||||||| | | | | | | |
Sbjct 84875 CCGTGCTTCGCGATCTTCTCCTTGAGTGCGGCCCAGTCCCACTGGTCGGTGGGCACGACC 84934
Query 244288 -GCGTTTGA-----GGCC--CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTG 244339
|| || | || | |||||| || ||||||| | || | ||| || ||
Sbjct 84935 GGCTTTCCATCCTCGGTCTTCCACATCTCGTACTGCAGGATTCCTTGGCTCACTGGCGAT 84994
Query 244340 CCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCG 244399
|| || |||||| ||||| ||||| ||| ||||||| || | || |||||
Sbjct 84995 CCTTCATAGGTCTCGTAGGTACCGTGCTGCTCCGCCAGCTCGCAAGAGGCTTCCAGGGCC 85054
Query 244400 GCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAG 244459
|||| ||||||||||||||||||| | |||||||| |||||| | | | |||||||
Sbjct 85055 GCGTGGTAGATGGTCTCGAAGATCCTTCGGTTCATGTTGCGGGCTTCGGGACTGGTGAAG 85114
Query 244460 GGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTG 244519
||| || ||| | ||||||| |||| |||| ||||| || ||||| || || || |
Sbjct 85115 GGGTAGCGCATGAGCATGAAGGCGTCCGCCAAGCCCTGGACTCCGATTCCAATCGGCCGA 85174
Query 244520 TGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTG 244579
|| | |||||||||| | ||| |||||||| ||||| |||| ||||||| | ||||
Sbjct 85175 TGCCTCTTGTTGGAGGTCTCGGCCTCGGGCACAGGGTAGTAGTTCGCGTCGATGATCTTG 85234
Query 244580 TTGAGGTTGCGGGTGAT--CATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGT 244637
|| ||||| | ||||| | | || || ||| | |||| |||| ||
Sbjct 85235 TTCAGGTTCCTCGTGATGACCTTCG--TGATCTCG---TGGAGCT---TCGCGTAGTCAA 85286
Query 244638 AGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGC 244697
| | | ||| || || || || ||| ||||||||| |||||||||||
Sbjct 85287 AAGTCTTCTCCTCGGTG---------ACGAAGCGGTTCAGGGCGACGGAGGCCAGGTTGC 85337
Query 244698 AGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACT 244757
| ||||| || || || | | ||||||||| ||||||||||||||||| |||||
Sbjct 85338 ACACGGCTACTTCTTCAGGCGAAGAGTACTGGACGATCTCGGTGCAGAGGTTGGAGCACT 85397
Query 244758 TGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGA 244817
|||| || || |||| || || |||||||| |||||||||||||||||||||||||
Sbjct 85398 TGATCGTCCCGAGGTTCTTCTGGTTGGACTTCTGGTTGCAGGCGTCCTTGTAGAGCATGT 85457
Query 244818 AGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCT---GTTCCAGAGGTCCCTAGCCT 244874
| || ||||| |||| || |||||| |||| | | ||| ||| | | ||||
Sbjct 85458 AAGGAGTGCCGGTTTCGATCT--GCGACG-TGACGATCTCCTCCCAAAGGGCGCGGGCCT 85514
Query 244875 TGAC-CG-TCCTGCGAGCCTTGCCCTCTGCCTCGTAGC--------GG------------ 244912
| || || | || ||| | || ||||||||||| | ||
Sbjct 85515 TCACGCGCTTCTTGTAGCGT--CCTTCTGCCTCGTATCTTAAAGATGGAAGTAAGAGCTT 85572
Query 244913 -----------------------------GTGTACAGGGCCTCGAACTCGGGGCCCCAGA 244943
||||| || || |||||||| || ||
Sbjct 85573 CTTGTAGAATTTCTGTATTGACTTACTTCGTGTAAAGTGCTTCGAACTCCTTTCCGTAGG 85632
Query 244944 CCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGA 245003
| |||| || || |||||| ||| |||||||| |||||| | |||||||||
Sbjct 85633 CGTCGTGGAGTCCAGGGCACTTGTGCGGACACATGAGGGACCACTCCTTGTCGTCCTTGA 85692
Query 245004 CCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCT 245063
| | || |||||| | ||||||||||||||| | | |||||| || | | | || ||
Sbjct 85693 CACGCTCCATGAACAAGTCGGGGATCCAGAGCCCGTAGAAGAGATCGCGAGCGCGCTCCT 85752
Query 245064 CGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCT 245123
| ||||| || |||||| || |||| || || || |||| ||| ||||||| ||||
Sbjct 85753 CCTCCGATCCGGTGTTCCTCTTCAGACGCAGGAACTCGAAGATGTCCGCGTGCCATGGCT 85812
Query 245124 CCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC-----------CTGGTC--- 245169
| ||||||| |||| ||| || || |||| | | | | || |||
Sbjct 85813 CGATGTAGATGGCGAAGGCTCCAGGACGCTGGAAACATTCAAGAATAAGAACTCGTCAAG 85872
Query 245170 -CACCA--------------TCCTC-----TCG----AGCG--------CGTTGAAGATG 245197
||||| ||||| ||| |||| |||| |||
Sbjct 85873 GCACCAAATCCTACCTTGTTTCCTCCTTGGTCGACGTAGCGAGCGGTGTTGTTGTAGACC 85932
Query 245198 CGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTG 245257
||||| |||| | | ||||| ||| ||||||||| || |||| | || |
Sbjct 85933 CGCAGCATAGGAATGAGTCCGTTGGAGGTGCCGTTGGTCCCAGCGATGAGAGTTCCGGAG 85992
Query 245258 CCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGC 245313
| | | ||| | ||||||| ||| | |||||||||| ||||||||| || ||
Sbjct 85993 GCTC---GAATGCAG-TGGACATTGAGGCCGATTCCGCCGGCGGACTTGGAGATCAGAGC 86048
Query 245314 GCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAA 245373
||| | || ||| | ||||| || ||| ||| ||||| ||||||| ||
Sbjct 86049 GCACTGCCAGAGGGTCTTGAAGATGCCGTCGATGGAGTCGTCACTCATGGTGAGCAGGAA 86108
Query 245374 GCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGT 245433
||||||| || |||||||||| | ||| | |||||| || || || ||| |||||
Sbjct 86109 GCAGGAGCTCATCTGGGGCTTGCAGGTGCCGGCGTTGAAGAGCGTCGGCGAGGCATGGGT 86168
Query 245434 AAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGT 245492
|| | | |||| || | || ||| || | || |||| ||||| || ||
Sbjct 86169 GAACCA-CCGCTCGGACATGAGGTTGTAGGTTTCGATGGCGGCGTTGATGTCTTCCTTGT 86227
Query 245493 GGATCTGCAGGGCGCAC-CTCATGAGGGTGTGCTGGGG-CGTCTCGATGGGTCCCTCGGG 245550
|||| | ||| ||| | ||| || | || ||||| ||| || | | || || |
Sbjct 86228 GGATTCCGACGGC-CACGCGCATCAGCATATGTTGGGGTCGT-TCCA--CGACCTTCCCG 86283
Query 245551 TC--CCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAG 245608
|| |||||| | |||||||||||| || |||||||| || ||||| | |||| |||
Sbjct 86284 TCGATCTTGAGGAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAAGTAGGTGTAGTTGAAG 86343
Query 245609 TCG 245611
|||
Sbjct 86344 TCG 86346
>seq2592
Length=18905
Score = 224 bits (248), Expect = 2e-53
Identities = 324/454 (71%), Gaps = 5/454 (1%)
Strand=Plus/Minus
Query 42578 GTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTG 42637
|||| || ||| ||| || || ||| ||| ||||| ||||| | | | || ||
Sbjct 15323 GTACGTCACGGACCCCCGGGAACGGAACACGCTCTTCAACGCCATACAAGAGTTCCCGTG 15264
Query 42638 CATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCG 42696
||||||||||||||| |||||||| || |||||||| | | | || ||| | ||||
Sbjct 15263 CATCAAGAAGAAGGCCGACTGGGCACTGCGCTGGATCG-GCGACAAGAACGCCTCCTTCG 15205
Query 42697 GCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCT 42756
| | || | ||||| ||||||| || |||||||||||||| || ||||||||
Sbjct 15204 GAACCCGCGTGATCGCCTTCGCCGCCGTGGAAGGCATCTTCTTCTCCGGATCCTTCGCCG 15145
Query 42757 CCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCA 42816
||||||||||||||||| || | ||||||||| |||||| | ||||||||||
Sbjct 15144 CCATCTTCTGGCTCAAGAAGCGCGGCCTGATGCCCGGCCTCACCCACAGCAACGAACTCA 15085
Query 42817 TCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCA 42876
|| | ||||||| || || || | ||||| ||||||||| ||| | | ||||
Sbjct 15084 TCTCCCGGGACGAAGGCCTCCACCGCGACTTCGCCTGCCTCATGTAC---AAGTACCTGG 15028
Query 42877 GGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGA 42936
| ||||||| || ||| |||| | |||||| |||||||| ||||||||
Sbjct 15027 AGAGCAAGCCCAGCCAGAAGCAGGTCAACGAGATCATCCGCGAGGCCGTCCAGATCGAGC 14968
Query 42937 AGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGT 42996
|||||| ||| || | | || |||||| | || ||||||||||| | ||| ||||
Sbjct 14967 AGGAGTACCTGACAGAAGCCCTACCCGTGGACATGATCGGCATGAACTGCCGCCTAATGT 14908
Query 42997 GCAAGTACATCCAGTACGTCGCCGACCATCTCCT 43030
| ||||||| ||||||| |||||||| || ||
Sbjct 14907 CCCAGTACATAGAGTACGTGGCCGACCACCTACT 14874
Score = 96.9 bits (106), Expect = 7e-15
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129
|||||||||||| ||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct 14788 CCCCTTCGACTTCATGGAGAACATCTCGATAGAGGGGAAGACGAACTTCTTCGAGAAGCG 14729
Query 43130 CGTCGCCGACTACCAG 43145
||| |||| ||||||
Sbjct 14728 GGTCTCCGAGTACCAG 14713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944250550157600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |