Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_009821.1
Length=164270
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 140 3e-28
>seq2257
Length=8409
Score = 140 bits (154), Expect = 3e-28
Identities = 273/401 (68%), Gaps = 2/401 (0%)
Strand=Plus/Minus
Query 135802 TTAATCTGTACGCCGTAGTCAAGATGGCGAATGCGGTTATCTTCCACCCCCTTATTGTTC 135861
|| ||||| || |||||||| | || ||||| ||||| |||||||| || ||||||
Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823
Query 135862 TTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGTCGCCGCC 135921
|| | || | ||| |||| | || | |||||||| ||||| | | || |||||
Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763
Query 135922 CCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTTCCAGAAT 135981
|| ||||| | |||||||| ||||| ||||| || |||| ||| || || ||||
Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703
Query 135982 GGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGAT-CCTTCCGCGCGAAT 136040
|| | || || || | |||||||| | ||| || | | ||| | ||||||||
Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCAC-CACGAATTTCGCTGCCTACGGCGCGAAT 5644
Query 136041 CATGCCAGCGTTGATACCGATACCAGCACGCTTGCTAATATACTTGATGATTGCATTTGC 136100
|||| | |||||||||||||| ||||||| | || | || || | |
Sbjct 5643 GCGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTGGT 5584
Query 136101 TGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCAATCACCACACACGAACTAAATTG 136160
|| | ||||||| | || ||| |||| ||| |||| ||| || || || || ||
Sbjct 5583 CGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTG 5524
Query 136161 GCGTGTTGGGGTACGCACACCTGCCATAATCGGAGTAGGCA 136201
||| || || || ||||| || ||||| || || || ||||
Sbjct 5523 GCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCA 5483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 525486665308000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |