Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_010106.1 Length=52975 Score E Sequences producing significant alignments: (Bits) Value seq2257 378 2e-100 >seq2257 Length=8409 Score = 378 bits (418), Expect = 2e-100 Identities = 747/1091 (68%), Gaps = 31/1091 (3%) Strand=Plus/Plus Query 51868 TACCTTTTCACAAACCAAGAATAACCAATTACTAGAGCCAATGTTCTTTGGTCAGAACGT 51927 ||| ||||| |||| | || |||| | ||| || ||||||||||| ||| || Sbjct 7170 TACTTTTTCTAAAACGGATAACGACCAGCTCAAAGAACCCATGTTCTTTGGGCAGCCGGT 7229 Query 51928 TAACGTTGCTCGATATGACCAACAGAAGTACGGCATATTCGAGAAGTTAATTGAGAAACA 51987 |||||| ||||| || ||||| || || || || || || ||| | ||||| || || Sbjct 7230 TAACGTGGCTCGCTACGACCAGCAAAAATATCCGATTTTTGAAAAGCTGATTGAAAAGCA 7289 Query 51988 ATTGTCATTCTTCTGGCGACCGGAAGAGGTAGACGTTTCCCAGGACCGTATTGATTATCA 52047 ||||| ||||||||||| ||||| || || ||| || |||||||||| || || ||||| Sbjct 7290 GTTGTCCTTCTTCTGGCGTCCGGAGGAAGTGGACATTACCCAGGACCGGATCGACTATCA 7349 Query 52048 GAAGCTACCTGCAAACGAACAACACATTTTCACCAGTAATCTTCGTTATCAGATTCTTCT 52107 ||| || |||| ||||| | |||||||||| ||| ||||| ||||||| | || Sbjct 7350 GAACCTGCCTGACCACGAAAAGCACATTTTCATCAGCAATCTGAAGTATCAGACCTTGCT 7409 Query 52108 TGACTCAATTCAGGGACGTGGGCCCAACACAGTTTTGCTTCCAATCGTGAGCATTCCTGA 52167 || || || ||||| || | |||||| | || || || | || ||||| || Sbjct 7410 GGATTCCATCCAGGGCCGCAGCCCCAACGTGGCCTTCCTGCCTTTGGTATCGATTCCGGA 7469 Query 52168 ATTGGAGACGTGGATTGAAACCTGGTCTTTCTCCGAGACTATTCATTCACGTTCTTATAC 52227 |||| || ||||||||||||||| ||||||||||||| ||||| || || || || || Sbjct 7470 GCTGGAAACCTGGATTGAAACCTGGGCTTTCTCCGAGACGATTCACTCGCGCTCGTACAC 7529 Query 52228 CCACATCATTCGTAATATTGTTACAGACCCAAGCATTATCTTTGATGAAATCGTAACTAA 52287 ||||||||||| ||||||| | ||||| | |||| ||||| || ||||| || Sbjct 7530 GCACATCATTCGCAATATTGCCAATGACCCGTCCGTTATTTTTGACGACATCGTGCGCAA 7589 Query 52288 CGAACACATCAAGGCACGAGCAATTGGCATCTCCCAATATTATGACGAACT--CCAGCAA 52345 ||| |||| || || || | ||| ||| || || ||||| || |||| | Sbjct 7590 CGAGAACATTCAGCTGCGTGCCGCCGACATTTCCTCGTACTACGACGATCTGATCAGCGA 7649 Query 52346 CTCACTGCATTATG-GCAGTTGTTCGGAGAAGGGAGCCATGCTGGTCA----TGAAA--- 52397 | | ||| || | ||| || || | ||| || | ||| ||||| Sbjct 7650 CACCATGCTGTACGCCCAGCTG---GGTGCAGGCGAACACG-AAATCAACGGTGAAACCC 7705 Query 52398 TTAGTCT--GCGT----GAGTTGAAGAAGAAGCTGTATTTATGCCTCATGTCTATCAATG 52451 || || |||| ||| |||||||||||||||| | ||| | ||| ||||| Sbjct 7706 GTACGCTAAGCGTCTACGAGCTGAAGAAGAAGCTGTACCTGTGCATGATGAGCGTCAATA 7765 Query 52452 CATTGGAAGCAATTCGCTTCTATGTCAGCTTTGCTTGCTCATTTGCCTTCGCAGAACGTA 52511 | || || || ||||| || ||||||||||| ||||| || ||||| || || || | Sbjct 7766 TTCTTGAGGCCATCCGCTTTTACGTCAGCTTTGCCTGCTCCTTCGCCTTTGCCGAGCGCA 7825 Query 52512 AGTTAATGGAAGGAAATGCCAAGATTATTCGCTTAATTGCACGAGATGAAGCACTTCATT 52571 || | |||||||| ||||||||||| |||||||| ||||| || |||||||| || ||| Sbjct 7826 AGCTGATGGAAGGCAATGCCAAGATCATTCGCTTGATTGCGCGTGATGAAGCGCTGCATC 7885 Query 52572 TGACAGGAACTCAGCACATGCTGAACCTTCTTGCAAGT---GGAAAAGATGACCCAGAAA 52628 |||| || || || ||||| | || ||| ||| || || | || ||||| || Sbjct 7886 TGACTGGCACGCAACACATCATCAATATTC-TGC--GTTCCGGCAGCGACGACCCTGAGT 7942 Query 52629 TGGGTGAAATTGC-TGCTGAATGCCGCCAAGAATGCCAGAAATTGTTCGAAGATGCTGCT 52687 | | | | || || || | || ||| | ||| | ||||| | ||||| || Sbjct 7943 TCGCTCAGATCGCGCGCGAACTGGAGCC-GGTCTGCTTTGACATGTTCAAGGATGCGGCC 8001 Query 52688 CAACAAGAGAAGGATTGGGCCGATTATTTGTTCAAAGATGGCTCTATGATTGGCTTAAAC 52747 | || || || | ||||| ||||| ||||| || || || ||||||||| | ||| Sbjct 8002 GAGCAGGAAAAACAGTGGGCGGATTACCTGTTCCGCGACGGTTCCATGATTGGCCTGAAC 8061 Query 52748 AAGCAAATTCTATGCGGATATGTGGAATATATCACGAATATTCGTATGCAAGCAGTTGGA 52807 ||| | ||||| | || ||||| || ||||| ||||| |||||| ||||| || Sbjct 8062 AAGGACATTCTGGGTCAGTACGTGGAGTACATCACCAATATCCGTATGGGTGCAGTGGGC 8121 Query 52808 TTAGATGCTCCATTCAAAGGTG-CAA--CTAACCCGATTCCGTGGATTAATGCATGGTTG 52864 | | || | || | || ||| ||||| ||||| ||||| || | |||||| Sbjct 8122 CTGAAGCCTGCGTTTGAGTCTGTCAAACACAACCCCATTCCATGGATCAACACCTGGTTG 8181 Query 52865 AATTCGGATGCTGTACAGGTTGCTCCACAGGAAACGGAGATTAGTTCCTACCTGGTCGGG 52924 ||||| | |||||||| || || || || ||| | || || ||||||||||| Sbjct 8182 TCCTCGGACACCGTACAGGTGGCACCTCAAGAGGTGGAACTGAGCTCTTACCTGGTCGGT 8241 Query 52925 CAAATTGACTC 52935 || || || || Sbjct 8242 CAGATCGATTC 8252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169383292838940