Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4628 132 6e-26 seq7237 84.2 3e-11 seq2592 82.4 9e-11 >seq4628 Length=2726 Score = 132 bits (146), Expect = 6e-26 Identities = 355/530 (67%), Gaps = 16/530 (3%) Strand=Plus/Plus Query 10630 CTCATTGAGGAGGTTCGCCAAGTCGGCACCAGAGAAGCCCGTCGTTTGCTTTGCGATGGC 10689 ||| |||| ||||| |||| ||||||||| |||||||| | ||| ||||| | Sbjct 1357 CTCGTTGACCAGGTTGGCCAGGTCGGCACCGGAGAAGCCGGGCGTACCACGGGCGATCAC 1416 Query 10690 GTGTAGCTTCACATCGTCAGCCAACTTCTTGTCTCTGGCGTGGACACCC--AAAATCTTC 10747 | | ||||| | ||| | | | | |||| || || |||| | ||||| | Sbjct 1417 GGCAGGGTTCACGTTGTCGCCGATCGGC--GTCTTGCGCATGTGCACCTTGAGAATCTGC 1474 Query 10748 TCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGACCTGGGCGG 10807 |||||||| || | ||| ||| |||| | | || || || || ||||| || Sbjct 1475 TCGCGACCACGGATGTCGGGCAGGCCCACGACCACTTGGCGGTCGAAACGGCCTGGACGC 1534 Query 10808 AGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTC 10867 || | || |||||| | || ||||| || || ||||| || | |||||| ||| Sbjct 1535 AGCAACGCAGGGTCAAGCACGTCCGGACGGTTGGTAGCGGCGATCACGATGATGCC-GTC 1593 Query 10868 --TCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCAT 10925 || || || ||||| |||||||| || | || |||| ||| || ||||| || | Sbjct 1594 GTTCATT-TCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTCTGCTCGCGCTCGT 1652 Query 10926 CATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGAT 10983 ||| | | ||| || || | || || |||||||||||| ||||| ||||| Sbjct 1653 CATGACCA--CCGCCCATGCCGGCGCCACGGTGGCGACCGACGGCGTCGATTTCGTCGAT 1710 Query 10984 GAAAACGATACACGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGG 11042 ||| | ||| ||||| | ||| || | || | || || || || || | ||| Sbjct 1711 GAAGATGATGCACGGCGCGTGCTTCTTGGCCTGCT-CGAACATGTCACGTACACGGCTGG 1769 Query 11043 CACCGACACCCACAAACATTTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACG 11101 ||||||||||||| |||||||| || || | || ||||| || | || ||| || || Sbjct 1770 CACCGACACCCACGAACATTTCAACGAAGTCGGAACCGGAA-ATGGTGAAGAACGGCACC 1828 Query 11102 TTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGG 11151 |||| |||||||||||||| ||| || |||||||| || || || || Sbjct 1829 TTGGCCTCACCCGCGATGGCCTTGGCCAGCAGGGTCTTACCGGTACCGGG 1878 >seq7237 Length=102105 Score = 84.2 bits (92), Expect = 3e-11 Identities = 201/304 (66%), Gaps = 0/304 (0%) Strand=Plus/Plus Query 115070 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCG 115129 || || || || || |||| ||||| | ||||||| | ||| | | |||| ||| Sbjct 86017 CCGATTCCGCCGGCGGACTTGGAGATCAGAGCGCACTGCCAGAGGGTCTTGAAGATGCCG 86076 Query 115130 TCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 115189 ||||| ||||| | | | | || ||||||||| ||| || ||| | || Sbjct 86077 TCGATGGAGTCGTCACTCATGGTGAGCAGGAAGCAGGAGCTCATCTGGGGCTTGCAGGTG 86136 Query 115190 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAG 115249 || ||||||||||| || || | || ||| ||||| | | |||||| | |||| Sbjct 86137 CCGGCGTTGAAGAGCGTCGGCGAGGCATGGGTGAACCACCGCTCGGACATGAGGTTGTAG 86196 Query 115250 GTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATG 115309 || || | | ||||| ||||||||| ||| || |||| | || ||||| | ||| Sbjct 86197 GTTTCGATGGCGGCGTTGATGTCTTCCTTGTGGATTCCGACGGCCACGCGCATCAGCATA 86256 Query 115310 TATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTC 115369 | ||||||| ||||| | | || |||| | | ||||||| ||||| |||| Sbjct 86257 TGTTGGGGTCGTTCCACGACCTTCCCGTCGATCTTGAGGAGGTAGGAGCGCTCCAGGGTC 86316 Query 115370 TTGA 115373 |||| Sbjct 86317 TTGA 86320 >seq2592 Length=18905 Score = 82.4 bits (90), Expect = 9e-11 Identities = 153/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 ||| || || ||||||| || ||||| |||||||||||||| || | | || || Sbjct 15050 GGCGAAGTCGCGGTGGAGGCCTTCGTCCCGGGAGATGAGTTCGTTGCTGTGGGTGAGGCC 15109 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| || || |||||||| | |||||| || || || || || ||||||||||| Sbjct 15110 GGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGCGGCGAAGGATCCGGAGAAGAAGAT 15169 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAA 126224 || ||||| ||||| || | | || | |||||| ||| |||| | | | Sbjct 15170 GCCTTCCACGGCGGCGAAGGCGATCACGCGGGTTCCGAAGGAG-GCGTTCTTGTCGCCGA 15228 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGA 126266 ||| || ||||| | ||||| |||| ||| ||||||| Sbjct 15229 TCCAGCGCAGTGCCCAGTCGGCCTTCTTCTTGATGCACGGGA 15270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597297523430800