Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq2257 136 4e-27 >seq2257 Length=8409 Score = 136 bits (150), Expect = 4e-27 Identities = 271/399 (68%), Gaps = 2/399 (1%) Strand=Plus/Minus Query 139688 TTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCCCTTATTGTTC 139747 || ||||| || ||||| || | |||||||| ||||| |||||||| || |||||| Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823 Query 139748 TTTAACACAATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAGAGTCGCCGCC 139807 || | || | ||| |||| | || | ||||| || ||||| | | || ||||| Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763 Query 139808 CCGCCACGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATGTTTCCAGAAT 139867 || ||||| | ||||||||| ||||| ||||| || || | ||| || || |||| Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703 Query 139868 GGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGAT-CCTTCCGCGCGAAT 139926 || | || || || | |||||||| | ||| || | | ||| | |||||||| Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCAC-CACGAATTTCGCTGCCTACGGCGCGAAT 5644 Query 139927 CATGCCAGCGTTGATACCGATACCAGCACGCTTGCTAATATACTTGATGATTGCATTTGC 139986 |||| | |||||||||||||| ||||||| | || | || || | | Sbjct 5643 GCGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTGGT 5584 Query 139987 TGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCGATCACCACACACGAACTAAATTG 140046 || | ||||||| | || ||| |||| |||||||| ||| || || || || || Sbjct 5583 CGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTG 5524 Query 140047 GCGTGTTGGGGTACGCACACCTGCCATAATCGGAGTAGG 140085 ||| || || || ||||| || ||||| || || || || Sbjct 5523 GCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGG 5485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532359620048800