Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_012740.1
Length=166418
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 136 4e-27
>seq2257
Length=8409
Score = 136 bits (150), Expect = 4e-27
Identities = 271/399 (68%), Gaps = 2/399 (1%)
Strand=Plus/Minus
Query 139688 TTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCCCTTATTGTTC 139747
|| ||||| || ||||| || | |||||||| ||||| |||||||| || ||||||
Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823
Query 139748 TTTAACACAATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAGAGTCGCCGCC 139807
|| | || | ||| |||| | || | ||||| || ||||| | | || |||||
Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763
Query 139808 CCGCCACGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATGTTTCCAGAAT 139867
|| ||||| | ||||||||| ||||| ||||| || || | ||| || || ||||
Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703
Query 139868 GGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGAT-CCTTCCGCGCGAAT 139926
|| | || || || | |||||||| | ||| || | | ||| | ||||||||
Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCAC-CACGAATTTCGCTGCCTACGGCGCGAAT 5644
Query 139927 CATGCCAGCGTTGATACCGATACCAGCACGCTTGCTAATATACTTGATGATTGCATTTGC 139986
|||| | |||||||||||||| ||||||| | || | || || | |
Sbjct 5643 GCGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTGGT 5584
Query 139987 TGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCGATCACCACACACGAACTAAATTG 140046
|| | ||||||| | || ||| |||| |||||||| ||| || || || || ||
Sbjct 5583 CGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTG 5524
Query 140047 GCGTGTTGGGGTACGCACACCTGCCATAATCGGAGTAGG 140085
||| || || || ||||| || ||||| || || || ||
Sbjct 5523 GCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGG 5485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 532359620048800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |